Cavenderia fasciculata (cellular slime mold): DFA_01639
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Entry
DFA_01639 CDS
T02668
Symbol
cdk7
Name
(RefSeq) p34-cdc2 protein
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03022
Basal transcription factors
dfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
DFA_01639 (cdk7)
09124 Replication and repair
03420 Nucleotide excision repair
DFA_01639 (cdk7)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
dfa01001
]
DFA_01639 (cdk7)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_01639 (cdk7)
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_01639 (cdk7)
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_01639 (cdk7)
Enzymes [BR:
dfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
DFA_01639 (cdk7)
2.7.11.23 [RNA-polymerase]-subunit kinase
DFA_01639 (cdk7)
Protein kinases [BR:
dfa01001
]
Serine/threonine kinases: CMGC group
CDK family
DFA_01639 (cdk7)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
DFA_01639 (cdk7)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
DFA_01639 (cdk7)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
DFA_01639 (cdk7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
APH
Motif
Other DBs
NCBI-GeneID:
14873341
NCBI-ProteinID:
XP_004359603
UniProt:
F4PTY5
LinkDB
All DBs
Position
Unknown
AA seq
336 aa
AA seq
DB search
MERYNVEKLIGEGTYGVVSKAVDTTTNKTVALKKIRNVQQAAHQGVGFSAIREMKMLQEL
KHENIIDLLDVFQHKSNMYLVFELMEWDLEKIIMDKSIILKPSDIKSYMKMLLQGLDACH
KNWILHRDLKPNNLLIGGDGILKLADFGLARQYGSPNKVYSPQAVTIFYRAPELLFGSRS
YGPSLDIWSVGCIFAELMLRTPYLPGTSEIDQLAKIFAALGTPNETIWPGVTSLPNYIKF
TDFPATPFKQLFTAAGDDALDLLSKMLTFNPSARCSATEALNHPYFTNNPKPTNPRDLPR
PNVRSPMTIDVNPVLGSGFKDKPGQNLNHSLNLANN
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atggaaagatacaatgtagagaaactaattggtgagggtacatatggtgttgtttcaaag
gctgtagatacgacaacaaacaagacagttgctcttaaaaagattagaaacgttcaacaa
gccgcacatcaaggtgttgggttctcagctattcgtgaaatgaaaatgttacaagaactt
aaacatgaaaatattatagatttattggatgtatttcaacacaagagtaatatgtatttg
gtatttgaattgatggaatgggatttggaaaagatcattatggataaatcaatcattctc
aaaccatcagacattaagagttatatgaaaatgttattacaaggtttggatgcatgtcac
aaaaattggatattacatagagatttaaaaccaaacaatttgttgattggtggtgatggt
attttaaaattggctgattttggtttggcaagacaatatggtagtccaaacaaagtatat
tctccacaagccgttacaattttctatcgtgcaccagaactattatttgggtctagatca
tatggaccaagtcttgatatatggtcagttggatgtatttttgcagaacttatgttacgt
acaccctatctaccaggaacatcagagattgatcaattggcaaaaatatttgctgctctt
ggaactcccaatgaaaccatttggcctggagtaacaagtttaccaaattatattaaattt
acagatttcccagcaacaccatttaaacaactttttacagctgctggtgatgatgccttg
gatttattaagcaagatgcttacctttaatccatcagctagatgttctgcaactgaagct
ttgaatcacccatatttcaccaataatcccaaaccaaccaacccacgtgatctaccaaga
ccaaacgttagatcaccaatgacaattgatgttaatccagttttaggttcagggttcaag
gataaaccaggtcaaaacttaaatcattctttaaatttagcaaataattaa
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