KEGG   Cavenderia fasciculata (cellular slime mold): DFA_01696
Entry
DFA_01696         CDS       T02668                                 
Symbol
snrpD1
Name
(RefSeq) LSM domain-containing protein
  KO
K11087  small nuclear ribonucleoprotein D1
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    DFA_01696 (snrpD1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:dfa03041]
    DFA_01696 (snrpD1)
   03032 DNA replication proteins [BR:dfa03032]
    DFA_01696 (snrpD1)
Spliceosome [BR:dfa03041]
 Complex A
  U1 snRNP components
   Sm proteins
    DFA_01696 (snrpD1)
  U2 snRNP components
    DFA_01696 (snrpD1)
 Complex B
  U1 snRNP components
    DFA_01696 (snrpD1)
  U4/U6.U5 tri-snRNP components
    DFA_01696 (snrpD1)
 Complex C
  U2 snRNP components
    DFA_01696 (snrpD1)
DNA replication proteins [BR:dfa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     DFA_01696 (snrpD1)
SSDB
Motif
Pfam: LSM WHD_ArnR1 BPL_C YomU_Tube Gemin7
Other DBs
NCBI-GeneID: 14873459
NCBI-ProteinID: XP_004359660
UniProt: F4PU95
LinkDB
Position
Unknown
AA seq 185 aa
MKARDANLHVQNLKIEKDFKKAWFRLVAQHPQPNVTLRFLMKLHNETVTIELKNGTIIHG
TIVGVDVSMNTHLKTVKLTLKGKNPINLDTLSIRGNNIRYYILPESLNLGTLLVDDGPKK
LKKKPQKEKPATTSAPMRGGRGGMRGGRGGGMRGGGVVTPTLQTYHINSFSVTNHPPTRA
LTPST
NT seq 558 nt   +upstreamnt  +downstreamnt
atgaaagctcgagatgcaaacctccatgttcaaaatttaaaaattgaaaaagattttaaa
aaagcttggtttcgattggtggctcagcatccacaaccaaacgttaccttaagattttta
atgaaattacacaatgaaacagtgacaatagaattaaagaatggtacaattatacatgga
actatagtcggcgttgacgttagtatgaatacacatctcaagactgtaaagttaacatta
aaaggaaagaacccaatcaatctcgacacactcagcatcagaggcaacaatatcagatac
tatatattaccagagtcactcaatcttggaacactcctagttgatgatggtccaaagaaa
ttgaaaaagaaaccacaaaaagaaaaaccagcaactacatcagcaccaatgagaggtgga
agaggtggaatgagaggaggaagaggcggaggtatgagaggaggtggtgttgtcacgcca
actttgcaaacctatcatatcaattcatttagtgtcaccaaccatccaccaactagagct
ctaactccatcaacttag

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