Cavenderia fasciculata (cellular slime mold): DFA_01715
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Entry
DFA_01715 CDS
T02668
Name
(RefSeq) histidine triad family protein
KO
K10863
aprataxin [EC:
3.6.1.70
3.6.1.71
3.6.1.72
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DFA_01715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_01715
Enzymes [BR:
dfa01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.1 In phosphorus-containing anhydrides
3.6.1.70 guanosine-5'-diphospho-5'-[DNA] diphosphatase
DFA_01715
3.6.1.71 adenosine-5'-diphospho-5'-[DNA] diphosphatase
DFA_01715
3.6.1.72 DNA-3'-diphospho-5'-guanosine diphosphatase
DFA_01715
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
DFA_01715
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
DFA_01715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DcpS_C
HIT
zf-C2HE
FHA_2
Motif
Other DBs
NCBI-GeneID:
14873502
NCBI-ProteinID:
XP_004359679
UniProt:
F4PUB4
LinkDB
All DBs
Position
Unknown
AA seq
450 aa
AA seq
DB search
MNSSSCLLLHKSKRLLSSIISSSLSSSSLSLSYRSLSSSNNNHSNKMKIVLSRVWSDPDT
SVRQSLTPLTIDLEKNPFNVGRGLLDIGDDRISRKQVELSIGLNSQQLLISQLGLNPSFI
QDYTQFIQLSTTKGVMVQDLVGQQIQKGSNQVINIGKEYSQGLILSFIIPDERPIHVKVD
VIPNTAPTTSPTNLLKRSQENKNDGEYNDKDLYDSDHKTKMKKVVEEETTSTTSTSSTST
TSTNSQQQLDNSTIVPPKPKPSTSKGKGSWSDALLPYCDDPEGHKDVVVWYDDQVVLIKD
VYPKSKYHFLMLPREHISNFKQLSKSHIPLLKKMYQDGMNYIKKNYPSIDIDKNLQVGFH
AIPSMRQLHMHFNTKDYNTPQLKRKEHWQSFTTEFYIPQNEFIGMLETNNQITIDKEKML
AIKDRPLECPKCHKQFDSIPKVKSHHSTCC
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atgaactcttcttcttgtttattattgcataaaagtaaaagattattatcatctataata
tcatcatcgttgtcgtcgtcatctttgtcattatcttatcgatcattatcatcaagcaat
aataatcatagcaacaagatgaagatagtattatcaagagtgtggagtgaccctgataca
tcagtgagacaatctcttacaccgttaacaatcgatttggaaaagaacccattcaatgtt
ggaagaggtctgttggatattggtgatgatcgaatcagtcgaaaacaagtagaactctct
attggtttaaatagtcaacaacttttaatttcacaattaggattaaacccatcatttatt
caagattatacacaatttatacaattgtcaacgaccaagggagtgatggtacaagatttg
gttggtcaacaaattcaaaaggggtcaaatcaagtaatcaatattggaaaagagtatagt
caaggtttaatattatcatttatcattccagatgaaagacctattcatgtaaaggttgat
gttattcctaataccgctcctacaactagtccaacaaatcttttaaagagatcacaagaa
aacaaaaatgatggtgaatataatgataaagatctttatgactctgatcataaaacaaag
atgaaaaaagtagttgaagaagaaacaacatcgactacttctacttcttctacttctaca
acatctacaaatagtcaacaacaattggataactcaaccattgttccaccaaaaccaaaa
ccatcaacaagtaaaggaaaaggatcatggagtgatgctttacttccctattgtgatgat
ccagaaggtcataaagatgttgttgtgtggtatgatgatcaagttgtcttgattaaagat
gtttatccaaaatcaaaatatcactttttaatgcttccaagagaacatatatcaaatttc
aaacaactttccaaatcacatataccattattaaaaaagatgtaccaagatggaatgaat
tatattaaaaagaattatccatcaattgatattgataaaaaccttcaagttggattccat
gccattccatcaatgagacaattacacatgcactttaataccaaagattacaatacacct
caattaaagagaaaagaacattggcaatcatttacaactgaattttatattcctcaaaat
gaatttattggaatgttggaaacaaataatcagattactattgacaaggaaaagatgttg
gcaattaaagataggcctttagaatgcccaaaatgtcacaaacaatttgatagtattcca
aaagtaaagtcacatcattcaacttgttgttaa
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