Cavenderia fasciculata (cellular slime mold): DFA_01973
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Entry
DFA_01973 CDS
T02668
Name
(RefSeq) Multicopy Suppressor of STA10-11; Mss11p
KO
K18734
protein SMG8
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_01973
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
DFA_01973
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
Motif
Other DBs
NCBI-GeneID:
14873347
NCBI-ProteinID:
XP_004359934
UniProt:
F4PR26
LinkDB
All DBs
Position
Unknown
AA seq
888 aa
AA seq
DB search
MSNNSKTPSSSSSSSTTTSSSGERKPKSDRQHHRYVKKSSSAEKTTTTSSTTSTSSSSTE
KTKSNSRSKNHHHSKQSQQPTTTTTTQVEQFNNEELSSSSSSLQDDSSYQEDQSSSIDLP
PSGRVCVIGVIGDSSQGKFMFLNKLVNQSVFHKVASPSTNDDNVNLSEEPIKLEIYHDES
KENVYINLNSIRDTRLLSMACQELSTLNNSTSNDIEKFFDDADYLYLKYLLFLFNTCNII
FLVFESLTIKLDYFNIFKTLKHMKQMTMPSINNILTKHNIPNDITPFLQPGRCIPILQVF
LVKDLTDNYSREYHLKLEENLKKQIITLLKNNSLFTSFSHHVNTFKKDQGGSSSLSSSSL
FLIEMNRPLVRLIRLYQIYNQPTSNQLIDEKGKSLSIQKHFRFYTQLMSVYESGYHNIPT
ACINSFKYSINNHKYKLAEYSLWEKITTSLLGGLFEQKESVLNNLKNYISIDLYFSSKIC
QSYFKLAIENYLEGLPPIYGSKIHQSKLQKSIQYLTLNSNGPAIDQYTNNLRIECESIWK
KGRKLCEAESVTGRVCTLKTHHLPSLGSSGVAKEYSSRGSNTDIETRPHSSGYRSLATCN
CGKTIKLREDVFDIEIANSTFFQQECCNQQCTLVDHSQTLLSYHSPITYQHKSYSPTFSW
FALLKFASSGLKNLNNSQENFSIPNDGYFVNNESILQDWEMKRIFAIWNNTSSSPNINLQ
KYETGKLAFEYQCPLGHRFYEKRRSRKFFIENSSSSDLSIFYQKQLLETCTHNECEYMAQ
LMRVVMIPTVDLSVRPVIEIKHNDKVSSKWEFSLESECQLQNRQSYLLRLPYIYLFENIN
LLRNQQLQSQQQQQQQQSQQNSSQQQPSSLLYLYFHLKNINQNDQSFE
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataatagtaaaactccttcttcatcttcatcttcatctactactactagtagt
agtggtgaaagaaaaccaaaatcagatagacaacatcatcgttatgtaaagaaatcatca
tcagcagaaaagacgactactacatcatcaaccacttcgacctcttcttcttctactgaa
aagacaaagtcaaattcaaggtcaaagaatcatcatcatagtaaacaatctcaacaacca
acaacaactacaacaacacaagtagaacaatttaataatgaagaactatcatcttcatca
tcatcattacaagatgattcatcgtatcaagaagatcaatcatcatctatagatttacca
ccaagtggtagagtatgtgttattggtgtaattggagattcaagtcaaggtaaatttatg
tttctaaacaagttggtaaatcaatctgtatttcacaaggtagccagtccatcaacaaat
gatgacaatgtcaatttatcagaagaaccaattaaattggaaatatatcatgatgaatca
aaagaaaatgtatatatcaatctaaattcaataagagatactagattactttcaatggct
tgtcaagaattgtcaactttaaataactctacttcaaatgatattgaaaaattctttgat
gatgcagattatctctatttaaaatatttattatttttatttaatacttgtaatattata
tttcttgtatttgaaagtttaactataaaattagattattttaatatatttaaaacttta
aaacatatgaaacaaatgacaatgccatcgattaataatatattgacaaaacacaacatt
cccaatgatattacaccatttttacaacctggtagatgtataccaatccttcaagtattt
cttgtaaaagatctcactgacaattactctagagagtatcatctaaaattggaagagaat
ctaaagaaacaaataataacattattgaaaaataatagtctgtttacttcattttctcat
catgtcaatacttttaaaaaggatcaaggaggatcctcctctctatcatctagttctcta
tttttgatagaaatgaatagaccattggttagattgattagattatatcaaatatataat
caacccacatcaaatcaattgattgatgaaaagggtaaatctttatctattcaaaaacat
tttagattttatactcaattaatgtctgtctatgaatctggatatcataatataccaaca
gcatgtataaatagttttaaatattcaattaataatcataaatataaattggcagaatat
tcattatgggaaaagattacaacttcattacttggtggtctttttgagcaaaaagaatca
gttttaaataatttaaaaaattatatttcaattgatctttatttttcttcaaaaatttgt
caatcatattttaaattggcaattgaaaattatttagaaggattaccaccaatttatgga
tcaaagatacatcaatcaaagttacaaaaatcaattcaatatctaacattaaattcaaat
ggtccagcaatcgatcaatatacaaataatcttagaatagaatgtgaatctatttggaaa
aagggtagaaagctatgtgaggctgaaagtgtgactggtagagtatgtactttgaaaact
catcatctaccaagtttgggtagtagtggagtggccaaagaatattcttcaagaggtagc
aatacagatattgaaacaagaccacattcatcaggttacagatcattggctacatgtaat
tgtggaaaaactataaagttgagagaggatgtatttgacattgaaattgcaaattctacc
ttttttcaacaggaatgttgtaatcaacaatgtactttggtagatcattcacaaacccta
ctaagttatcattcaccaattacctatcaacataaatcctacagtccaacattttcttgg
tttgctctacttaaatttgcaagtagtggattaaagaatttaaacaatagtcaagaaaat
ttcagtataccaaatgatggttattttgtaaataatgaatctatccttcaagattgggaa
atgaaaagaattttcgcaatttggaataatacatcatccagtccaaatattaatttacaa
aaatatgaaacaggtaaattagcatttgaatatcaatgtccattaggacatagattttat
gaaaagagaagatcaaggaaattttttattgaaaatagttcatcgtctgatctatcaata
ttttatcaaaaacaattgttggaaacatgtacacacaatgaatgtgaatatatggcacag
ttgatgagagtggttatgataccaacggttgatctatcggttcgaccagtcattgaaatc
aaacacaatgacaaggtatctagtaaatgggaatttagtttggaatctgaatgtcaacta
caaaatagacaatcttatttactgcgattaccttatatttatttatttgaaaatataaac
ctacttcgtaatcaacaattacaatctcaacaacaacaacaacaacaacaatcacaacaa
aattcttcacaacaacaaccttcatctttactttatttatattttcatttaaaaaatata
aatcaaaatgatcaaagctttgaataa
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