Cavenderia fasciculata (cellular slime mold): DFA_02190
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Entry
DFA_02190 CDS
T02668
Name
(RefSeq) nipped-B protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_02190
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
DFA_02190
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nipped-B_C
HEAT_2
Cohesin_HEAT
Cnd1
PHD
INTS1_R4
DUF1484
Motif
Other DBs
NCBI-GeneID:
14871465
NCBI-ProteinID:
XP_004357674
UniProt:
F4PYD6
LinkDB
All DBs
Position
Unknown
AA seq
1744 aa
AA seq
DB search
MYPLLHNNNNNNQNINNNNIVNNTLLQQQQQHYITTCSNLGSIGDPIHEIPLPIYRNDRS
IDLIQADYAIKQNVLSNAVNTLTSANNNNNNINNSNAILSNINMMIDQTNISYLKFKPSS
SSSSKSSDNNENTPPPSSSSSSLMTTIYNHLPATTYTTTTTTQSQTLSTNNNDIKVLPST
SSAFVSSDNEFIDKHFPNNNNNNNNNNNTNNKKVVSTKKKRTTTTKPTLSLIEQQESLIN
TTLNDNISKRKQKTINHNVSNANLNQTQQNTIDDHHQQQPIIQVSKKITIQEKLVTQIRY
LLENIERDKDHETFNSTYIDNLRMDLSIVEKNDEMSLGDIELEHYASLFQHLYRLVKAAK
QVHSLSFKETMQQQDILEFNKLELAFASSSLITQLLSLPVIGNLLCELIEDDLVDFVTTC
KSLINENIFGHLDPSFKLRHPTSTSSSSSTASTKNGEGKKETDKEESGDDDEEDSDDDDD
DYDTDGDSDEKDDNKDESQTEKKKRNTNIKKQKTSKTKSSPVSSKHSKKKGNNYYLSICN
RVTEYYSRLTIFLERYTPPNESFANIMMDYTIPSLFISGPIHLVQLYSINLLRVVFQKFP
SHRNQIFDQLLSSLPKTLSFKKLNIRTFKLENDKSIQNISALFLQLIQSSAQLPSAKQET
ITLKSSSLQSYQNFISMIILYFIQKCSIKNPSDEFDYRTILDNFLQDMLLLMNHPDWPAA
NMVLHFLSGSLCEVLSEQSKVNLGDQVSTLKALSIDILGTIIAKIKQEMLTIQDDIQSLP
LLLLEFQQPAATTTTTTTTTTTLTNQHVICQCKQYQPIGSFMVKCNQCKKTYHDLCAPDY
SLNDSTHHQQTWICVHCKIYDQISDFIPSATTTTISSDTPPDQKPNKTTKKKSSKSKKED
PIKEDSYNSAIDLPKEDGDLQQQQQQQQQNKYIQVGNDHDVVSQLIINYYLEKEQREPSM
TTSKQFTIAYWFDSMKSALSQKEKQYLLSQWDNQQQQQQQQQQGGRRYVMNQELTFKLYR
ILSTSIKSSIFQVSNQILDKLLKVLDDTSKAARAKTMKSFSLIVEVDPSVLVDEYVDTIK
KRFSDDAISVREHTVDLIGKYILVKPESTWKYMDAICQRISDKGISVRKRVIRTLHDICI
SQSDHPMIPHLCKIMVTRISDDDSIKDVVVQTFKDLWFNDNDSNATAANGYKQKIINKTK
QIVEVVKMLNQDDWFVDLIKQLLDENQAKKGKKKQSKKTAQQVMSTCQDICSNVIEILIS
FDEKKRSKELPEFLALFKCLRIFCKVNPSFLTPFAKLLHPYIKLTKAINNEELKVYINVT
YILQKTIPKLENVEKEFIETLEKDLITLISNQGSQLVLSSIKCLCSISQNTSYNYKVVEN
LFCKSLQSLQDCERKTKGELLRSLYITGLLVRYFDFEKRKYFSILLPESLNFDDGVIEVI
IPIVSRIYKLTKDKDIISKSLEAIGNIILSEPSILMFETIKEILSISLSSPEVKINDTVL
SVYIKLLKHEGKNKDQLVHETPAKQEDQMSDNDSQEGEGKDRKPIISMNVDIDGESLVAS
IQKFFIPICKLLTNSDPMVRLKSLTAIELIVHQGIINPLEAVPEIITLITDSNSEISTLA
YLTLKKIDEKFSSTLFKRIIESLQICFKFHSSLGTSKSIKQSRTIFIHQIMSQFDGCKSF
KYKDLEFYRFVAELLASLPYGNMDELFEIIKQLSLFPAVPVIGRYEKGANPNSNFPRLQN
SYGQ
NT seq
5235 nt
NT seq
+upstream
nt +downstream
nt
atgtatccactactacacaataataataataataatcaaaatattaataacaataacatt
gtaaataatacattgctacaacaacaacaacaacattatataacgacttgtagtaatctt
ggtagtataggagatccaattcatgaaatacctcttcctatctacagaaatgatagatct
attgatctcattcaggctgattatgccatcaaacaaaatgtactctcaaatgctgttaat
actctaacatctgccaacaacaacaacaacaacattaataatagtaatgcaatattgtca
aatatcaatatgatgatcgatcaaaccaatatatcctacttgaagtttaaaccatcatca
tcatcatcatctaaatcatctgacaacaatgaaaatactccaccaccttcttcttcttct
tcttcattgatgacaaccatttataatcacctaccagccacaacctatacaactactact
actactcaatcccaaacattatcaaccaacaacaatgatattaaagttttaccatctaca
tcatctgcttttgtatcaagtgacaatgaatttattgataaacactttcccaacaacaac
aacaacaacaacaataataataatactaataataaaaaggtggtctcaacaaaaaagaaa
agaacaacaacaacaaagcctactctatcattgattgaacaacaagaatcattgatcaat
acaacactaaatgacaacatctctaaaagaaaacaaaaaactatcaatcataatgtttcc
aatgccaacttgaaccaaacacaacaaaataccatcgatgatcatcatcaacaacaacca
attattcaagtgagcaaaaagattacaatccaagagaaattagtaacacaaatacgatat
cttttagagaatattgaaagagataaagatcatgaaaccttcaactctacctatatagat
aatcttcgaatggatctatcaatcgtagaaaagaatgatgaaatgtcattgggtgacatt
gaattggagcattatgcatctctttttcagcacctttaccgtcttgtcaaggctgccaaa
caagtccactctctttctttcaaagagacaatgcaacaacaagatattttggagttcaac
aaactagagttggcgtttgcaagctcatcattaatcactcaattactgtcactacctgtt
atcggtaatttactttgtgaattgatagaagatgatttggttgattttgttacaacttgc
aaatcactaatcaatgaaaatatctttggacacttggacccttcttttaaattgagacat
cccacttctacttcctcctcctcttccactgcttcaacaaagaatggtgaaggaaaaaaa
gaaacagacaaagaagaaagtggtgatgatgatgaagaagatagcgatgatgacgatgat
gattatgataccgatggtgatagtgacgaaaaagacgacaacaaagatgaatctcaaaca
gaaaagaaaaagagaaatacaaacatcaagaaacaaaagacttcaaagacaaaatcatca
cctgtttcttctaaacattctaaaaaaaaaggaaataattactatttatcaatttgcaat
agagtaacagaatactattcaagattaacaatatttttagaaagatacacaccaccaaac
gagtcttttgccaacattatgatggactataccattccatctttatttataagtggacct
atccacctcgttcaactatactctatcaatctcttacgtgttgtctttcaaaaattccca
tctcaccgcaaccaaatatttgatcaattactatcaagtttaccaaaaactctttcattc
aaaaagctcaatattcgtacctttaagttagaaaatgataaatcaattcaaaatattagt
gcactatttttacaattgattcaaagttcagcccaactcccctcggccaaacaagagact
atcaccttgaaatcctcttctttacaatcttaccaaaattttatatctatgattatttta
tattttattcaaaagtgttcaatcaaaaatccatcagatgaatttgattatagaactata
ttggataactttttacaagatatgttgttattaatgaatcaccctgattggccagccgcc
aacatggtattacactttttgtctggatcattgtgcgaggtattgtcagaacaatcaaag
gtcaatttaggagatcaagtatcaactcttaaagccttgtcaattgatatattgggtacg
attattgccaaaatcaaacaggaaatgttgaccattcaagatgatatacaatccctacca
ttattattattggaattccaacaacctgctgccaccaccaccaccaccaccaccacaaca
acaacattgacaaaccaacatgtaatttgtcaatgcaaacagtatcaaccaattggatca
tttatggtaaaatgtaatcaatgcaagaaaacctatcatgatctatgtgctccagattat
tcactaaatgatagtactcaccaccaacaaacttggatttgtgttcactgtaaaatctat
gaccaaatatctgatttcataccatcagcaacaacaacaaccatttcatcagacacacca
cccgaccaaaaaccaaacaagacaaccaaaaaaaaatcctccaaaagtaaaaaagaagat
cctatcaaagaagacagctacaacagcgcaattgatttgccaaaagaggatggtgaccta
caacaacaacaacaacaacaacaacaaaacaaatatattcaagttggaaatgatcatgat
gtagtatcacaattgatcatcaactattaccttgaaaaagaacagcgagagccatcaatg
accacctctaagcaatttactattgcctattggtttgattcgatgaaatctgcattgtca
caaaaagagaagcaatatttgttgtcccaatgggataatcaacaacaacaacaacaacaa
caacaacaaggtggacgaagatatgtaatgaatcaagagttgacatttaaattgtacaga
atcctttcaactagtatcaaatcatcaatctttcaagtctctaatcaaattctcgacaaa
cttttaaaggtactagacgatacctcaaaagctgcaagagccaaaacaatgaaatctttt
tctctcattgttgaagtcgatccatctgtccttgtagatgaatatgtagatacaatcaaa
aaaaggttttctgatgatgcaatctcggtaagagagcacactgtagatttgataggaaaa
tatatattggttaaaccagaatctacatggaagtatatggatgctatatgccaaagaata
tcagacaagggaatcagtgtacgaaaaagagtaatcagaacactccatgacatatgtatc
agccaatctgaccatccaatgattccacatctatgcaagataatggttacaagaatatca
gacgatgacagcattaaagatgtagttgtccaaacctttaaggatctatggttcaatgac
aatgatagcaacgctaccgctgccaatgggtacaaacaaaaaattatcaacaaaaccaaa
caaatagttgaagttgtaaagatgttaaatcaagatgattggtttgtagatttaatcaaa
caacttttggatgaaaaccaagctaaaaaaggcaaaaaaaaacaatcaaagaaaacagcg
caacaagtaatgagcacatgtcaagatatctgctcaaatgttatcgaaatcttaatttcc
tttgatgaaaagaaacgatccaaagaacttccagagttcttggccttgtttaaatgcctc
agaatattttgcaaagtcaacccatcttttttaacaccatttgccaaactattacatccc
tatattaaactaacaaaggcaattaataacgaagaattaaaagtatatataaatgtaaca
tatatattacaaaaaaccataccaaaattggaaaatgttgaaaaagaatttattgaaaca
ctagaaaaggacttgattactttaattagtaaccaaggatcacaactagttttatcctcg
atcaaatgtctttgctctatatcccaaaacactagctacaactacaaggttgtcgagaat
cttttctgcaaaagcctacaatcacttcaagactgtgaacgtaaaaccaaaggtgaacta
ttaagatcactttacattactggtctcttggttagatactttgactttgaaaaaagaaaa
tattttagcattcttcttccagagtctttaaattttgatgatggagtaatcgaggtgatc
ataccaatagtttctagaatctacaagttaaccaaagataaagatatcatttcaaagtca
ttggaagcaattggcaacattattctatcggaaccatcgattcttatgtttgaaaccata
aaagaaattctatcaatatcattatcctctccagaggttaaaattaatgacactgttcta
tcagtctacatcaagctattgaaacatgaaggaaagaacaaggatcaattagttcatgaa
acaccagccaaacaagaggatcaaatgtcagacaatgatagccaagaaggagaaggaaaa
gatagaaaaccaattatttctatgaatgtggatatcgatggagagtcacttgtagcatca
attcaaaaattctttataccaatttgcaaactattaacaaacagtgatccaatggtcaga
ttaaaatcactcactgcaatagaattgatcgttcaccaaggaatcatcaatccattagag
gcagtacctgaaattatcacgctaatcactgatagcaactctgaaatttcaacattggcc
tatctaaccttgaagaaaatagatgaaaagttttcatctactctctttaaaagaatcatt
gaaagtttacaaatttgttttaaattccatagtagtttgggaacaagtaaaagcataaaa
caatctagaacaatatttattcatcagatcatgtcacaatttgatgggtgcaagtcattc
aagtacaaagatttggaattctaccgatttgttgcagaattgttagcatcccttccctat
ggaaacatggatgaacttttcgaaatcattaaacaattatcccttttcccagcagttccc
gtcattggaagatacgaaaaaggagcaaacccaaactcaaattttcctagactacaaaac
tcttatggacaatga
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integrated database retrieval system
