Cavenderia fasciculata (cellular slime mold): DFA_02244
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Entry
DFA_02244 CDS
T02668
Symbol
sf3b1
Name
(RefSeq) HEAT repeat-containing protein
KO
K12828
splicing factor 3B subunit 1
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_02244 (sf3b1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_02244 (sf3b1)
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_02244 (sf3b1)
Spliceosome [BR:
dfa03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
DFA_02244 (sf3b1)
Complex B
DFA_02244 (sf3b1)
Complex C
U2 SnRNP specific factors
DFA_02244 (sf3b1)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
DFA_02244 (sf3b1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF3b1
PPP2R1A-like_HEAT
TOR1L1_N
HEAT_EZ
HEAT
TPR_DNAAF5
HEAT_MROH2B_C
HEAT_EF3_N
Cnd1
HEAT_2
HEAT_ECM29
TPR_IPO5
PIK3R4-like_middle
Htt_N-HEAT_1
XMAP215_CLASP_TOG
IFRD
Motif
Other DBs
NCBI-GeneID:
14871033
NCBI-ProteinID:
XP_004357486
UniProt:
F4PYX2
LinkDB
All DBs
Position
Unknown
AA seq
1028 aa
AA seq
DB search
MKDKTTTTSEWDETPSTKTTAAVAATPRRNRWDETPQKLATSTIEQTPKRRSRWDETPVT
ISGGMGGSATPQIMSGGIGATPRFDVSSTPNVLMHAGMMTPDVHQLRAEKELDERNKPWT
DEDLNAALPSEGYEILMPPSNYQPIMTPARKLMATPAAGVGGGFFMQEENRSQDYGVSET
MTQGGLPIKPEDKQYFDKLLKVSDEDEEMLSPEELKERKIMKLLLRIKNGTPPMRKAALR
QLTDKAKEFGPAALFNQILPLFTSQSLEDQERHLLVKVIDRILYKLDDLVRPFVRKILSV
IEPYLIDQNYYARVEAREIISNLSKAAGLASMTATMRPDIDSPEEDIRNTTARAFAVVAS
ALGIPALLPFLTAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKGLVEIVEHGLTDE
QPKVRTITALAIAALAEAATPYGIESFDSVLKPLWYGIQHYREKGLAAFFKAIGYIIPLM
DASYASYYTKEVMGILIREFKTNEDEMKKIVLKVVKQCVGTEGVEAQYIRDEVLPEFFKC
FWIRRMALDRRNHKQLVDTTVELANKVGGAEIISRIVDDLKDESEAYRKMVMEAIEKIIS
TLGASDINPRLEEQLIDGILYAFQEQTTDETAIMLQGFGTIVLALGVRVKPYLTQIAGTI
KWRLNNKAAKVRQQAADLISRIAVVVQMCEEEQLLGHLGQILYEYLGEEYPEVLGSILGA
LKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGADFVLEREWM
RICFELLDLLKAHKKGIRRAAVNTFGYIAKAIGPQDVLTTLLNNLKVQDRQNRVCTTIAI
AIVAETSAPYTVLPGLMNEYRIPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDA
LMDRDPVHRQTACSAVKHMSLGVQGLGCEDALVHLLNLVWPNILETSPHVINAFLEAVEG
LRIALGPAVILQYTLQGLFHPARRVRDIYWKVFNMLYVSSQDSMIPAYPKTIDDGLNTYQ
RYELEYIL
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataaaactactacaacatcagaatgggatgaaacaccatcaaccaaaactaca
gcagcagtagcagcaacaccaagaagaaatagatgggatgaaacaccacaaaagttagca
acatcaactatagaacagacaccaaagagaagatctagatgggatgaaacacctgtaacg
attagtggtggtatgggaggatctgcaacacctcaaataatgagtggtggtattggtgcg
acaccaagattcgatgtatcatctacaccaaacgtattgatgcatgctggtatgatgact
cccgatgtacatcaattacgtgcagaaaaggaattggacgaacgaaacaaaccatggaca
gatgaagatctcaatgcagcattgccatcggaaggctacgaaatattaatgccacctagt
aactatcaacccatcatgacacctgccagaaagttaatggctacacctgctgcaggtgtt
ggtggtggattttttatgcaagaggaaaatagatcacaagactatggtgtttcagagaca
atgactcagggtggtctaccaatcaaaccagaggataaacaatattttgacaagttgctc
aaagtaagcgacgaggatgaagagatgctctcaccagaggagctaaaggaaagaaaaatt
atgaaattattattgcgtatcaagaatggaacaccaccaatgagaaaggctgctcttcgt
caactaacagacaaggcaaaggaatttggtcctgccgctctgtttaatcaaatcttacca
ctctttacatcacaatcgttggaagatcaagaacgtcatcttttggtcaaggtcatcgat
cgtattctctacaagttggatgatttggttcgtccctttgtcagaaagattctttcagtc
attgaaccatacctcatcgatcaaaactattatgctcgtgtagaagctcgtgaaatcatt
tccaatctttcaaaggctgccggtcttgccagtatgactgcaacaatgcgtccagatatc
gacagtccagaagaggatattagaaatacgactgctcgtgcatttgcagttgtcgcatct
gccttgggtattcctgcactccttccattccttactgccgtttgtcgtagtaaaaaatca
tggcaagcaagacacactggtatcaagattgtccaacagattgctattctaatgggatgt
gccattttgccacatctaaagggcctcgtagagattgttgaacacggtctcacagacgaa
caacccaaggttcgtaccattaccgctttggctattgcagccctcgccgaagcagccact
ccctatggtatcgaatcatttgacagtgttctcaaaccactctggtacggtattcaacac
tatcgtgaaaagggattggccgcctttttcaaggccattggttatatcatcccacttatg
gatgcaagttatgccagctactataccaaagaagtgatgggtattctcatcagagaattc
aaaaccaacgaagatgaaatgaaaaagattgtgttaaaggttgtcaagcagtgcgttgga
acagagggtgtagaggctcaatacattagagacgaagtgttgccagagtttttcaaatgt
ttttggatcagaagaatggctctcgacagaagaaatcacaaacaattggtagataccacc
gtagagttggccaacaaggttggcggtgcagagattatctctcgtattgtagatgaccta
aaggacgagtcagaggcttacagaaaaatggttatggaagctattgaaaagatcatctct
acacttggcgcttccgatatcaaccctcgtcttgaagaacagttgatcgatggcattttg
tatgcctttcaagaacaaaccaccgacgaaactgccattatgcttcaaggttttggtaca
atcgtcttggcacttggtgtgcgagtcaagccctatctcacccaaatcgcaggtaccatc
aagtggcgtctcaacaacaaggcggccaaggtacgtcaacaagctgccgatctcatctct
cgtattgcagtggtcgtccaaatgtgtgaagaggagcaactcttgggtcatcttggtcaa
atcctctatgaatacctcggtgaagagtatccagaggtattgggttcgattttgggtgca
ctaaaggccattgtcaatgttattggtatgaccaaaatgacaccacccatcaaagatctc
cttccacgtcttacacccattctcaagaatcgtcacgaaaaggtacaagagaattgcatc
gatttggtaggtcgtattgccgatcgtggtgccgattttgttttggaacgtgaatggatg
cgtatttgttttgagttgctcgaccttttaaaggcacacaaaaaggggatcagaagagcc
gcagtcaatacttttggttacattgcaaaggcaataggtccacaagatgtattgacaaca
ctcctcaacaatctcaaggtgcaagatcgtcagaatcgtgtttgtactacaattgccatt
gccattgtcgcagaaacatctgccccctatactgtccttccaggcctcatgaatgaatat
cgtatcccagagctcaacgttcaaaatggtgtcttgaaatcgctctcttttctctttgaa
tacattggcgaaatgggtaaagactatatatacgctgttactcctctactagaggacgct
ctcatggatcgtgatccagttcatcgtcaaactgcatgctctgccgtcaaacacatgtct
cttggagtacaaggtctaggttgcgaggatgcactcgttcatctactcaatcttgtgtgg
ccaaatattttagaaacctctccccatgttatcaatgcatttttagaggcagtagagggt
ttacgtatcgctttggggcctgctgtcattcttcaatatactttacaaggactcttccat
ccagctcgtcgtgttcgtgacatttattggaaggttttcaacatgctctacgtttcctct
caagattcaatgattcctgcctatccaaaaacaatagacgatggattaaatacttatcaa
cgttatgaattggaatatatattgtaa
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