Cavenderia fasciculata (cellular slime mold): DFA_02479
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Entry
DFA_02479 CDS
T02668
Symbol
msh2
Name
(RefSeq) mutS like protein
KO
K08735
DNA mismatch repair protein MSH2
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
DFA_02479 (msh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_02479 (msh2)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
DFA_02479 (msh2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
DUF4709
AF2331-like
Put_DNA-bind_N
Motif
Other DBs
NCBI-GeneID:
14870808
NCBI-ProteinID:
XP_004357202
UniProt:
F4Q060
LinkDB
All DBs
Position
Unknown
AA seq
923 aa
AA seq
DB search
MDTSTSNDQSTTVASSLKEDKGFTTFYRSLETVQDSTIRFFDRKGYYSIHGQDAIYVALL
HFKTKKALKYWANDLAPTKKKQKLGNSSSSSLDSIATAEEDDEESNNGLAYLTVRDGIEF
EGIVQKLFEQKQKVEVWAPKASRVGQWEIIKKGSPGNLQMFEDILNIKDQSLMVALRVST
IEGNRVIGAAFGDSTLKTIGVLQFIDNDHLSNLSSFLLQMGIKECLISVDKKNSVDCKKV
MDKLQDSEVPFTEVPNSDFNTKNIEQDLTRLLGSINNVLNEIEKELAMQSLSCLIKHLDL
LSNQSYFGKFKLVSFNLDNFMRLDAATFKGLNIISSDPTNKQGMSIFNLLDKCNTPMGSR
KLSQWVRQPLVDQEEIETRLNFVEIFVNALELRQALRSNDLKKIGDLERLSKKLVGGKAT
LEDVVNLYGVVQRLSVLLSSLRSYEDQGSEMVESTFTQPLEQIIAEFQQFSAMVEKTVDL
DQAYETHEYVIRSSFSDELSEIHNKKQNCMKKINQLREKIADDLGIDEARVKLHQSDKDG
YLVRLSRKDEKLIRGNAKYIVYGTQKDGVRFSTSDIRKLNEAYMSSSVQYNEKQQGLVQR
ALEITTSFVPLIDDLCSLIATLDVFASLGHVSSSAPSPYVRPIVHPMGKGNITIVGGRHP
CVEVQDNVNFISNDIDLTRDKSTFQIITGPNMGGKSTFIRQVGIITLMAQIGCFVPAEQA
EISIVDCILTRIGAGDSQLRGVSTFMAEMLETAYILKTATKNSLIIIDELGRGTSTYDGF
GLAWGIAEYICHQIGAFCLFATHFHELTVLQEILPLTVKNLHVQANVNDHSGLTLMYKVK
EGACDQSFGIHVAIMAGFPDQVVQVARLKAKELESFESNSLASLDSVSQFIQDFKSLDMQ
QQDQDKVFNLVNNLLSKYQLNLD
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atggacacttcaacatcaaacgatcaatcaacaacagttgcatcatcattaaaagaggat
aaaggatttacaacattttatagatcattagagactgtacaagattcaacaatacgtttc
tttgatagaaagggatattattcaatacatggtcaagatgctatatatgttgcattgtta
cactttaaaacaaaaaaggctttaaaatattgggcaaatgatttggcaccaactaaaaag
aaacaaaagttgggcaactcctcctcctcctctttagattcaattgcaactgctgaagag
gatgatgaagaatcaaataatggattggcatatttaacagttcgtgatggtatagagttt
gaaggtatagttcaaaagttgtttgaacaaaaacaaaaagtagaagtatgggcaccaaag
gcaagcagagtgggtcaatgggagattataaagaaaggatctcctggcaatttacaaatg
tttgaggatatactcaacattaaagatcaatcattgatggttgctctacgtgtatctaca
atcgaaggaaatagagttattggtgctgcttttggtgattcaactcttaaaactattggt
gttttacaatttattgataatgatcatctttcaaatcttagttcatttttattacaaatg
ggaattaaagaatgtttaatatctgtagataaaaagaatagtgttgattgtaaaaaggtt
atggataaattacaagattcagaagtaccatttacagaggttccaaattcagattttaat
accaaaaacatagaacaagatttaacaagattattaggttcaattaataatgttttaaat
gaaatagaaaaagaacttgcaatgcaatcattaagttgtttaattaaacatttggatcta
ttatcaaatcaaagttattttggaaaatttaaattggtttcattcaacctagacaatttt
atgagattagatgcagcaacgttcaaaggtttaaatattattagtagcgaccctaccaac
aaacaaggaatgagtatattcaatcttttagacaaatgcaataccccaatgggctcgaga
aaattatcgcaatgggtccgtcaaccactcgtcgaccaagaggaaattgaaacaagatta
aattttgtagagatttttgtcaatgcattggagcttagacaagccttgcgatccaatgat
ttaaaaaagattggcgatttggaaagactatcaaaaaagttggtgggaggcaaggcaaca
ttggaggatgtcgtcaatctatatggtgtggttcaaagactttcagttcttctctcttca
ctccgttcctatgaagatcaaggatcagagatggtagagagtacttttactcagccactc
gagcaaattattgcagagtttcaacaattctctgccatggttgaaaagacagtcgatctt
gatcaagcctatgagacacacgaatatgtcatcagatcatcatttagcgacgaattgtct
gaaattcacaacaagaaacaaaattgcatgaaaaagattaaccaactacgtgaaaagatt
gccgacgatttgggcattgacgaagcaagagtcaagttgcaccaatcagacaaggatggc
tatctggttcgtcttagcagaaaagatgaaaagctcattagaggtaatgccaagtatatc
gtgtatggtacacaaaaggatggcgttcgattcagtacatcagatattcgtaagctcaac
gaagcctacatgtcatcttcagtccaatacaatgaaaagcaacaaggacttgtacaaaga
gcattggagattacaactagttttgtacccctaattgacgatctctgttctctcattgca
acactcgatgtatttgctagtttgggacatgtatcttctagtgccccttccccctatgtt
cgtccaatcgttcatccaatgggaaaaggaaacattaccattgtaggaggaagacatcca
tgtgtcgaggtacaggataatgtaaactttatttccaacgatattgacttgaccagagac
aaatcaacatttcaaattattactggtccaaatatgggtggaaagagtacttttatcaga
caggttggaatcattacattgatggcacaaattggatgttttgtaccagcagagcaagca
gaaatttcaattgtcgattgcatattgacaagaattggagcaggtgacagtcagcttcgt
ggtgtctctacttttatggcagagatgttagagactgcctacatactaaagactgcaaca
aagaattcacttatcatcattgatgaactgggaagaggaacaagcacatacgatggtttt
ggtttggcatggggcattgcagaatatatttgtcatcaaattggagcattttgtctcttt
gccacccatttccatgaactcacagttctccaagaaattctaccactcactgtaaagaac
ctccacgttcaagccaatgtaaatgatcacagtggcttgaccctaatgtacaaggtcaaa
gaaggtgcatgtgaccaatcatttggtattcacgtcgccattatggccggttttcctgat
caagtcgtacaagttgcacgacttaaagccaaagaattggaatcgtttgaatcaaattca
cttgcttctctcgattctgtttcccaatttattcaagattttaaatctttagatatgcaa
caacaagatcaagataaagtttttaatcttgttaataatcttttatcaaaatatcaatta
aatttagattaa
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