Cavenderia fasciculata (cellular slime mold): DFA_02566
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Entry
DFA_02566 CDS
T02668
Symbol
ddx10
Name
(RefSeq) putative RNA helicase
KO
K14776
ATP-dependent RNA helicase DDX10/DBP4 [EC:
5.6.2.7
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_02566 (ddx10)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DFA_02566 (ddx10)
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
Helicases
DFA_02566 (ddx10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
DUF3592
Motif
Other DBs
NCBI-GeneID:
14870941
NCBI-ProteinID:
XP_004357289
UniProt:
F4PZR3
LinkDB
All DBs
Position
Unknown
AA seq
897 aa
AA seq
DB search
MDHSESYSTAPPKKANNNNNNKNNKNNNNNKNGNKKGPNKQQQQQQKQKQQQQEKGSLRK
KGNLYKSIKEEQVNKKKNREIALKQYHEEIKELNKRIKDEAPARGSNPLANKVNDDKKNE
EYKISYSAASKFNQLPISKLTMKGLDEKKYIDMTDIQRSSIPHSLCGRDILGAAKTGSGK
TLAFIVPMLELLYRNSWNIEDGVGAIILSPTRELAIQIFDVLRDAGKYHSFSAGLIIGGK
NVDNEKKKINEMNILIATPGRLLQHMDETEGFRCNNLQMLILDEADRILDFGFTKTLNSI
VQNLPSSRQTLLFSATQTKSVKDLARLSLREPEYVSVYDRDLMSTPANLTQTVMFSTLED
KINLLYSFLHSHLTKKTIVFLTTCKQVRFIYETFYLINPGCRLFQLHGKMKQTSRLDVFQ
QFCDEKMGTLFATDVAARGLDFPTVDWVIQMDCPDDIATYIHRVGRTARNNTEGNSLTVL
LPTEKPFIKLMEKQNIHHQILETNPEKSINIQPKLAAILSEKVDLKYLAQKAFITYVKSI
YRQDNKEVFSLEGLDLKAFSNSMGLPGAPNIQIGKTLKTDKNNSYKLTELQKKQYEKKLE
KEKKAKELEERGEELVEDEDNLSEDEKEVPKISKYNVSRVERLFKRKNPNVFSEEFDKLR
DKMDEEDDVFVMKRKDHTLEDVQEEIEENDKTTELNRRQQNRLVKIQNRIINPEVKSKIQ
LDEANEFVGQDHQLPQDYIEEMKSRMEQVDPEDKEVHKQKLRDRRQRKLLKLKEKERPQG
KDQEDGQDGEKGGAYFVPQSDEEEYEYIDDGEEYQPSDNDSDGDSSESSYEYTYDGEEYK
PSDDEESESEEEEEEPVKPTKKNIKSIKSTPQPKPVLGKRSIDEQEEAALQILKRRK
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atggatcatagtgaaagttactctacagcacctccaaaaaaggcaaacaacaataataat
aataagaataataagaataataataataataagaatggtaataagaaaggaccaaataaa
caacaacaacaacaacaaaaacaaaaacaacaacaacaagaaaaaggtagtctaagaaag
aaaggaaatctttataaatcgattaaagaagaacaagtaaataagaaaaagaatagagag
attgctttaaaacaatatcatgaagagattaaagaattaaacaaaagaattaaagatgaa
gctcctgctagaggtagtaacccattagcaaataaagtaaatgatgataaaaagaatgaa
gaatacaagatatcatactctgcagcatcaaagtttaatcaattaccaatttcaaagttg
acaatgaaaggtttggatgaaaaaaagtacattgatatgactgatatccaaagatcttct
attccacattcactttgtggtcgtgatattcttggtgctgcaaagactggttctggtaaa
actcttgcttttattgttcctatgcttgaattactttatagaaattcatggaatattgaa
gatggagttggagctattatattatcaccaactagagaacttgctattcaaatattcgat
gtgttgagagatgctggaaagtatcattcattttcggctggtttgattattggtggcaaa
aatgtagacaatgaaaagaaaaagatcaacgagatgaatattttgattgctacaccaggt
cgtcttttacaacatatggacgagactgaaggttttagatgtaataacctacagatgctc
attctcgacgaagcagatcgtatcctcgattttggattcaccaaaacactcaattccatc
gttcagaatcttccatctagcagacaaactcttttgttttctgccactcaaacaaagtct
gttaaagatctagctcgtctcagtctacgtgaaccagaatacgtgtcagtctatgaccgt
gatctcatgtctacaccagccaatctcactcaaactgtcatgttttcaacactcgaagac
aagattaatctcttgtactcgtttttacactcacatttgacaaaaaagactattgtcttt
ttgactacatgtaaacaagtccgatttatctatgaaaccttttatttgattaatcctggg
tgtcgtcttttccagttgcacggcaagatgaagcaaacatcacgtctcgacgtattccaa
caattttgtgatgaaaagatgggtacgttgtttgccaccgatgtcgctgctcgtggtctc
gatttcccaactgtcgattgggtcattcaaatggattgtccagatgacattgccacctat
atacatcgtgttggtcgtaccgcccgtaacaacactgaaggaaactctcttaccgtcctc
ctcccaaccgagaaaccatttatcaaattgatggaaaagcaaaacatccaccaccaaatc
ttggaaaccaaccccgaaaaatcaatcaacattcaacccaaattagcagccatcctctct
gaaaaggttgatctcaagtatttggctcaaaaggcatttatcacatacgtcaagtcaatc
taccgtcaagacaacaaagaggtgtttagtttggagggattggatttaaaggcattttca
aactcgatgggtttgccaggtgctcccaacatccaaattggaaagaccctaaagaccgac
aagaacaactcctacaagttgacagaactacaaaagaaacaatacgaaaagaaattggaa
aaggagaaaaaggcaaaggaactagaggaaagaggtgaggaattggtcgaagacgaagac
aacctctcagaagatgaaaaggaagtgccaaagatttcaaagtacaatgtttcaagagtt
gaaagattgttcaagagaaagaatccaaacgtcttttcagaggagtttgataagctcagg
gacaagatggatgaagaggacgacgtgtttgtcatgaagagaaaggatcatacactcgaa
gacgtacaagaagagattgaggagaatgacaagaccaccgaactcaatagacgtcaacaa
aacagattggtcaagatccaaaacagaatcatcaaccccgaggtaaagagcaagattcaa
ttggacgaagccaatgaatttgttggacaagatcatcaattgccacaagattacattgaa
gagatgaaatctagaatggaacaagtcgatccagaagacaaggaagtacacaaacaaaaa
ttacgtgaccgtcgtcaaagaaaacttttgaaattaaaggaaaaagaaagacctcaagga
aaggatcaagaagatggacaagatggagaaaaaggtggagcttattttgttcctcaatca
gatgaagaggaatatgaatatattgatgatggtgaagaatatcaaccaagtgacaacgat
agtgatggtgattcaagtgaaagttcatatgaatatacctatgatggtgaagaatataaa
ccaagtgatgatgaagaaagtgaaagtgaagaagaagaagaagaaccagtcaaaccaact
aaaaagaatatcaagtcaatcaaatcaactccacaaccaaaaccagtcttaggaaaaaga
tcaatcgatgaacaagaagaagctgctttacaaattttgaaaagacgtaaataa
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