Cavenderia fasciculata (cellular slime mold): DFA_03118
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Entry
DFA_03118 CDS
T02668
Symbol
smc1
Name
(RefSeq) structural maintenance of chromosome protein
KO
K06636
structural maintenance of chromosome 1
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_03118 (smc1)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
DFA_03118 (smc1)
Meiosis-specific proteins
Cohesin complex and associated proteins
DFA_03118 (smc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_21
AAA_29
ABC_tran
Motif
Other DBs
NCBI-GeneID:
14876691
NCBI-ProteinID:
XP_004362724
UniProt:
F4PGN9
LinkDB
All DBs
Position
Unknown
AA seq
1476 aa
AA seq
DB search
MCSIDSLEVKNFKSYKGTHILGPFLQFSCVIGPNGSGKSNLMDAITFVLGVSSATSTRSN
ISQLVYSSATTTVDVPTTPKFNDLIAEAQKEQHTPDKGDDDGDHDDDGDDQVGPTKKKKG
QLESYVKLKYIDFSKDDDDDGDGSGSGQTVYEFMRKIRGSSTVYYINSKTVDRNDYLDKL
STLGVHSSCSNFCVLQGDVQNIASKDPREITRAVERISGSDQFKAEYDQLYKQKTEIEAL
SVRTYSRVKELTVDRDHYKTQLAEHKQYFKVVKQRDEIAIKIALLELKFIRSELARFTGM
REKAAKEIAQIESERENLANEKKQANKKQATKHKEVMEMEFKLKKLTQKKNKTKPNAFKA
TEEINFLTERAKKIQDMIAQANKNRSLQQKTLEMLTQQQNEIQEKLEQLDLTQQLDKGLS
LTNDQIERYNALKVQAGKTTSEDKKKLDQLLRTQNFEREKQSSQEASIDDWTKMIEQLDN
STKQLEERKKKSEELLVHIEKQIQELTEEIGKTSSRNESQYKRQQTLTKELDQIQFKLSS
EKTHRAEKERDKKMNYAISECKKLFPGVKGKLIDLCRPRNKFETAFTVAMGKLADAVVVE
TELAANMCMSYFKEQMVGVTTFLPLDRLYAKPTNEKLRQLGGDGRTAKLLMDCIEFDSQI
DLAVRYAIGNLLVCDTLQEARMMAFSAERHKVITIDGIKITKSGLMSGGLMGVKDRTAKL
NAGNVEELKKRRDSILQDLAEIEHTSANFYELDNLKSRLEELKSTAQLHKDTLKPIEERI
KKNATEKESKIRLIDSFDKEVDQLKKSTTERQALIDSTQAAIDKEEKGIFADFCKELKIP
NIQEFEVNRMEKLQKQTQAKLELSLQLSKVQNQINYEGKKDYNNEVSLLDNDLKSNNQQL
EKEIQTQTATQNENEEIQDQITDANDKLKKLKDEVLELNNTIKQLRTISDDKAKAHGELE
SSIKIYDVAIENGKVEYHKLLAKAKLDNMKLPLLKEDQMEVEEEEEEEKEDSDEEMKDSD
EDEDEKKKKKKQPPPTSPKKKKNAAAPTTPKKKKKGSDDDEEDEEDEEEKGNKKKKPSAT
SPKKSPGKGTKRKVDDVDEEEKEKEKDKGDEEEDEDVKKKRLEEEEEEKKRRLIAGEDEE
EEEEAVDEEDDDNDFLDQVQLWDNMIPDDERLEFFNRHLRIRIDFSSISKLKVKNTNELE
DIIKDLAQEDKRLKITMDTNPPNPKAMENLKKATDALREASSQHKDQIKRGKEIVTQFNR
IKTDRTELFQKAFDTIKTEIDAIYGELTRDLYPPYLRGSASLSLDDTETPFNSGIKYSAI
PPNKRSRDMDDLSGGEKSIAALAFLFAMHKYRPSPFFILDEVDAALDSINVLKLVRYIRE
KSSVTSQLQFIVISLKELFYSNSDGLVGICRNIADSSSISLTVRLDHLPVKTVELLPIKD
KNKIDSRIMSARKQAMSSASETSDTGGDATSTSVSE
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgtgttcaattgatagtctagaggtaaagaacttcaagtcgtacaagggaacacatata
cttggtccttttctacagttctcatgtgttattggtccaaatggtagtggcaagagtaac
ttgatggatgcaatcacatttgtactcggtgtatcaagtgcaacatcaactagaagcaat
atcagtcaattggtgtattcgtcggcaaccactactgtcgatgtacctacaactcctaaa
ttcaacgatctcattgctgaagctcaaaaggaacaacatactcctgataaaggagatgat
gatggtgatcatgatgatgatggtgatgatcaagtaggacctactaaaaagaaaaaggga
caattagaatcatatgttaaattgaaatatattgatttcagcaaggatgatgatgatgac
ggagatggtagtggtagtggtcagacagtatatgaatttatgcgaaagattaggggatcg
tcaactgtatattatatcaattccaagacggtcgaccgtaacgactatttagacaagttg
tcgacgttgggtgtgcattcgagctgctccaacttttgtgtgttgcagggtgacgttcaa
aacatcgcgtccaaggacccaagagagatcacacgtgccgtcgagagaatatcgggctcg
gaccagttcaaagcagagtatgaccaactgtacaaacaaaagacagagattgaagcattg
tcggtacgaacatacagtcgtgtcaaggaactcaccgtcgacagagaccattacaaaaca
caactagccgaacacaagcaatactttaaagtggtcaaacaacgtgacgagattgccatc
aagattgcgctcttggaactcaagtttatacgtagcgagttggcacggttcacaggtatg
cgtgaaaaggctgccaaggagattgcacagatcgaatcggaacgtgagaacttggccaat
gaaaagaaacaggccaacaagaaacaagccaccaaacacaaagaagtgatggagatggaa
ttcaaactcaagaaactaacacaaaagaaaaacaagaccaaaccaaacgcattcaaagca
actgaagaaatcaactttttaacagaacgagctaaaaagattcaagatatgattgctcaa
gccaacaagaaccgttcattacaacaaaaaacactggaaatgcttactcaacaacaaaat
gaaattcaagagaaattggaacaactcgatctcactcaacaattggataaaggtcttagt
ttaacaaatgatcaaattgaacgttataatgctttaaaagttcaagctggtaaaactacc
agtgaagataaaaagaaattggatcaattacttagaacacaaaattttgaaagagaaaaa
caatcaagtcaagaagcttcaattgatgattggactaaaatgattgaacaattggataat
tcaaccaaacaattggaagaaagaaagaaaaagagtgaagaattattggttcatattgaa
aaacaaattcaagaattaacagaagaaattggtaaaacatcttctagaaatgaatctcaa
tataaaagacaacaaacattaacaaaagaattggatcaaattcaatttaaattgtcatca
gaaaagacacatagagcagaaaaggaaagagataaaaagatgaattatgcaatttcagag
tgtaaaaagttattcccaggtgtcaagggcaaattaattgatttgtgtagaccaagaaac
aagtttgaaacggcatttaccgtcgcgatgggtaagttggccgatgcagttgtcgtcgag
actgaattggctgccaatatgtgtatgtcgtactttaaggagcagatggttggcgtgacc
acctttttgccattggacagattgtacgccaagccaaccaacgaaaagttgcgtcagttg
ggtggagacggtcgtaccgccaaactgctcatggattgtatagagtttgattcacagatt
gacttggctgtgcgttatgccattggcaatttgttggtgtgtgacacactacaagaggct
cgtatgatggccttttcagccgaacgtcacaaagtcatcaccattgacggtatcaagatc
accaagagtggtttgatgagtggtggtttgatgggtgtcaaggaccgaacagccaaactc
aacgcaggcaatgtagaagagctcaagaagcgtcgtgactcgatcctacaagacctcgcc
gagattgaacacacctctgccaatttctacgaactcgataatctaaagagccgtcttgaa
gagctcaaatcaaccgcccaactccacaaggatactctcaagcccatcgaagagagaatc
aaaaagaatgcaactgaaaaggagtccaagatccgtctcattgacagttttgacaaggag
gttgaccaactcaagaaatcaaccaccgaacgacaggcactcatcgattctacccaagcg
gccattgacaaggaggaaaagggcatctttgccgacttttgcaaggagctcaagataccc
aacatccaagaattcgaagtcaaccgtatggaaaagttacaaaagcaaacacaagccaag
ctagaactctctcttcaactttcaaaggttcaaaatcaaatcaactatgaaggtaaaaaa
gattataacaatgaagtgtccctactggataatgatctcaaatcaaacaatcaacaattg
gaaaaggaaattcaaactcaaactgccactcaaaatgaaaatgaagaaattcaagatcaa
attactgatgcaaatgataaattaaagaaattaaaggatgaagtattagaattaaataat
acaattaaacaattgagaactatatctgatgataaagcaaaggcacatggagaattggaa
tcatcaattaaaatttatgatgtggcaattgaaaatggaaaggttgaatatcataaattg
ttggcaaaggcaaaattggataatatgaaattaccattattaaaagaagatcaaatggaa
gttgaagaggaagaagaggaggaaaaggaagattctgatgaggaaatgaaagattctgat
gaagatgaagatgaaaagaaaaagaaaaagaaacaacctcctccaacatctccaaagaaa
aagaaaaatgcagccgctcctactacaccaaagaaaaagaaaaaaggatctgatgacgat
gaggaagacgaagaggatgaagaggaaaagggtaataagaaaaagaaaccatctgccaca
tcaccaaagaagagtccaggaaaaggtacaaagagaaaagtagatgatgtagatgaagaa
gaaaaagaaaaggaaaaagacaaaggtgatgaagaagaggatgaagatgtaaagaaaaag
agattagaagaagaagaagaagagaaaaagagaagattaattgctggtgaagatgaagaa
gaggaagaagaagctgtcgatgaagaggatgatgacaatgactttttggatcaagttcaa
ctctgggataatatgatcccagatgatgaaagattagaattctttaacagacatcttaga
attagaattgatttttcttctatatcaaaacttaaagttaaaaacacaaatgaattagaa
gatataataaaagatttggcacaagaagataaaaggttgaaaattactatggatacaaac
ccacccaatccaaaagcaatggagaatcttaaaaaggcaacggatgcattgagagaggct
tcatcacaacacaaagaccaaatcaaacgtggaaaggagattgtaactcagtttaataga
atcaagactgacagaaccgaactctttcaaaaggcatttgatacgatcaagacagagatt
gacgcaatctatggtgaacttaccagagacctatacccaccctatctcagaggatcggct
tcattgtcacttgatgacactgagactccgttcaactctggtatcaagtacagtgccatt
ccaccaaacaagcggtcgcgtgatatggacgatttgtcgggtggtgagaaatcaattgcc
gcgcttgcctttttatttgccatgcacaagtatcgaccatcaccctttttcatcttggat
gaagtcgatgctgcgctagacagtatcaatgttttgaaattggtccgttacattcgagaa
aagagtagtgtcactagtcaactgcagtttattgtcatctcgctcaaggaactcttttac
agcaactctgatggtttggttggcatttgccgtaatattgccgattcctcctccatatct
ctcacagtccgtcttgaccatctcccagttaaaacagtcgaactattacccatcaaagat
aaaaacaagattgattcaagaatcatgtctgccagaaaacaagcaatgagtagtgcttct
gaaacaagtgatactggtggagatgcaacttcaacatctgtttctgaataa
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