Cavenderia fasciculata (cellular slime mold): DFA_03188
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Entry
DFA_03188 CDS
T02668
Symbol
vps8
Name
(RefSeq) RING zinc finger-containing protein
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
DFA_03188 (vps8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfa04131
]
DFA_03188 (vps8)
Membrane trafficking [BR:
dfa04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
DFA_03188 (vps8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS8_N
TPR_Vps8
Beta-prop_VPS8
TPR_Vps41
Beta-prop_HPS5
TPR_VPS8_2
WD40_CDC20-Fz
zf-C3H2C3
zf-RING_Vps41
zf-RING_5
zf_RING_Vps8_fungal
zf-rbx1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
14877072
NCBI-ProteinID:
XP_004362794
UniProt:
F4PGV9
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MSNNIQKKQYSNSNNNNSSNNEYDNVEDINNSNSKGGGGGKGRGEWRSGNVNNSSSNNNN
NNSRNNTTGSNSNNNSMSELPQLVTMLSAPAPPTLRVYDPQQQFSQSQYNHTITAQMMAK
EKDGGSSESNNNSFSQVLASATSQQSDSTSNSLNNSINDSIFNKSTTDIVDQEMLKKILS
EDDDDDVDIDDEQEIDINQLLNDNQDIEDEEDLEEMMSVANSSKIIDGSSSTGGVAVGGV
GGIGMFSPIYGTSPSTVSLSSAAGLQINPHHHGSNLFNSSINNHNNSSSTSSVISKHMMN
SIDINSDNILPMLWGSKNARRSLNGIVVEPQFYTKLSEQLSSPDIRKEAGYPTCFSTSKY
ICIGTSHGFLLIFNYNQDLVSIIGGTICADSGSVTAIDQPSCKVNEDWMVSGHQNGQIIL
WDIPTGKPLKVMDATIHKHPILHLKFFSDGQRFISSDAHGVTYIITITRGFMSLGSDQQL
LLNGNLGPVLSIAPLLPGNYPHPTDKSHIFALATKRKILVISASIEGVCILNNKITKPTY
DELRVFDPFALEEVESVNVKSMQIIHHSKFQSVYSFHNSIRTNKSRIYLLGLNGFFTAHV
LTWLERLSVLVSNQQWFEALCLALDFYEGKAKATTGLSSNTIDCKLLTGEKIIEMLSQLC
YIVFSQPNGGGGGSLNNSHSNLHSLGGKSGGGSDSPSIVILRSRNLIPKNLIDNEQISNM
TMHQQLALICIEFCVTIKRTDFLFGEIFNYFVESGMVATILEFLEPYILHDRLVHLNPEV
MQFMMNHYQEKGILLRAEQCLLHLDIASLDFHQTVVLCRKHHLYSALIYLYNRGLDDYIT
PLEDMMELVVLKPTEENQQEEEDNGNGHINRGDLNGGISPNLISSNHLNLVEEVSKRLLH
YLRYSLSGRVFPSGKPIPSQRVPSLKMEIYEYLFLRNIFPEDPTPYPRLFNLLKLNSLEM
INILSNSFDDQLLSIPASPKQPQPSQQYQQQLQQQQLQQQQQVHKAGSVPSVNSSLVIPA
IPFNVNKSNLNHHTMMSVLLLIVIDRSQQPYDPHTNESWPFTIEQQGQVCVLLAKCFEKR
LIKSIEPTLLGRLVGILSVPPIASAAPIYNRTDRQSSLLGVLMNSSPKDYDSDKLLVIAE
GNELYRVAQYIYSQQRQYAKMVVCQIRDPDTRAQTFDYVRQLLENPALNDADRQTVRQTT
ISNLAHLIVVDSTATAQLIMDYFASDHEKIVKELGQFPKLQYTYLVGLLGNDSSSRVAIQ
QRTGIYISNETYELYIKLMCMYSSDLVYKYLVSHDDYPLDACLKICQQYNNFEGATYLLE
RTGDVYKALEMIVTVLKKKIEDILKHFSNVYANVKNLKNEKATAIPIEKEIMDTLNTAIA
LCQRNSQKLQISENQMIWFRLLDTIVLFVRKVKQSMINSNSNSPLLLADDRTPGGWSKGS
LISSPQQSQSPSLVPLTLDPNGNIDTSSSSSSSLINNINLLQQKPKSAIYVKCTGFLNRL
IHIILNSMMGSVALPLILTKIVNDHGSDEFGDFKAIITGMLDTCTFETSILHTANQLIQN
DMYNTTRSYIRQRSKAYSPVMRKCVMCSRPIGDFPASSNNQQVPLDLVVVFQCNHAIHST
CMGKHSACPLCSKDNENAENNGSNNKKKKEKSNNNNNINSSSNPNQQKQPNQPLSPILFD
PKKIRQDKDGGQGNTYLERLSNYTKLNKRNTYSYYNTNNILKSKSSDDHQLYSPIISKQA
SRYSQHYQQQQQQQYQQHQQQQQQYQQQHSTQQRTNRPTTSNTSSQSKYTRE
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atgagtaataatatacaaaagaaacaatatagtaatagtaataataataatagtagtaat
aatgaatatgacaatgtagaagatattaataatagtaatagtaaaggaggaggaggagga
aaaggtagaggagaatggagatcgggtaatgttaataatagtagcagtaataataataat
aacaatagtcgtaataatacaacgggtagtaatagtaataataatagtatgagtgaacta
ccacagttggtaacgatgctgtctgcaccagcaccaccaacactaagagtatatgatcct
caacaacaatttagtcagagtcaatacaaccatactatcactgctcagatgatggcaaag
gaaaaggatggtggtagcagtgaatcaaacaacaactcattctctcaagtactagctagt
gcaacttcacaacaatcagatagtacaagcaactctttaaataattcaatcaatgatagt
atctttaataaatcaacaactgatatagttgatcaagaaatgttaaaaaagattctaagt
gaagatgatgatgatgatgtagatatagatgatgaacaagagattgatattaatcaattg
ttaaatgataatcaagatatagaagatgaagaggatttggaagagatgatgagtgttgca
aactctagcaagatcattgatggtagtagtagtactggtggcgttgccgtaggtggagtg
ggaggtattggaatgttttcaccaatctatggaacatcaccttcaaccgtttcactttct
tctgccgctggattacaaattaatcctcatcatcacggttcaaacctatttaatagtagt
atcaataatcataacaactcatcatcaacatcatcagtcatttccaaacatatgatgaat
tcaatcgatatcaatagtgacaatatattaccaatgttgtggggatcaaagaatgctaga
agatcattgaatggaattgtcgtcgaacctcaattttacacaaaactatccgaacaatta
tcatcaccagatattagaaaagaagctggttatcctacttgtttttctacatcaaaatat
atttgtattggtacatcacatggatttttattaatatttaattataatcaagatttggta
tcaattattggaggtacgatatgcgcggatagtgggtcggtgacagcgattgatcaaccg
agttgcaaggtgaatgaggattggatggtgagtggacaccaaaatggacagattatattg
tgggatatcccaacgggcaaaccactcaaagtgatggatgcaaccatccacaaacatcca
atcctacacctcaaattcttttccgatggacaacgatttatttcgtcggatgcacacggt
gtcacttatatcattacgattacacgtgggttcatgtcgttgggatcggatcaacaacta
ttgctcaatggcaatttggggccagtcttgtcgattgctcccctcttgccaggcaactat
ccccatccaactgacaagtcacacatatttgcattggcaaccaagagaaagatccttgtc
atttcagcatcgatcgagggtgtttgcattctcaacaacaagattaccaaaccaacctat
gacgagttgcgtgtatttgatccatttgcattggaagaggttgagagcgtcaatgtaaag
tctatgcaaatcatccatcactccaaattccagtcggtctactcgttccacaatagtatt
cgtaccaacaagtcgcgtatctatttgctagggttgaatggattctttacagcacacgtt
ctgacttggttggaacgtctgtctgtattagtgtcgaatcagcagtggtttgaagctctc
tgcttggcattggatttctatgaaggcaaggcaaaggccaccacaggtctgtctagcaat
acaatcgactgcaagttactcactggagaaaagatcattgaaatgttgtctcaactatgt
tatatagtctttagtcaaccaaatggtggtggtggtggaagtttaaacaatagtcattca
aatctacattcacttggtggaaaatctggtggtggaagtgactcaccatcaattgttatt
cttagatcacgtaatttgattccaaagaatctaattgacaatgaacagattagtaatatg
acaatgcaccaacagttggcattgatttgtatagagttttgtgtcaccatcaagagaacc
gactttttatttggtgaaatcttcaactactttgtcgagagtgggatggttgccaccatt
cttgaattcctcgagccatacattctccacgaccgtctcgtccatctcaatccagaggtg
atgcaattcatgatgaatcattatcaggaaaagggaatcttgttgcgtgccgaacaatgt
ctcttgcatctcgacattgccagtttggatttccatcaaaccgtcgtactctgtcgtaaa
caccatctttacagtgcactcatctatctctacaatagaggtttggatgattatatcact
ccacttgaagatatgatggaattggttgtattaaaaccaactgaagaaaatcaacaagaa
gaagaagataatggaaatggtcatattaatcgtggtgatttaaatggaggaatatcacca
aatttaatatcatcaaatcatttaaatcttgttgaggaggtttcaaaacgattattacat
tatctaagatacagtctttcagggagagtgtttccaagtggtaaaccaatcccatcacaa
cgtgtgccatcactcaagatggagatttacgagtacctctttttacgcaacatattccca
gaggatccaacaccctatcctagactattcaatcttttaaagttgaatagtttagagatg
atcaatattctctccaactcttttgacgatcaactcttgtctattccagcatcacccaaa
caacctcaaccatctcaacaataccaacaacaactgcaacaacaacaattacaacaacaa
caacaagtacacaaggcaggatcggtaccatctgtaaattcatcgctcgtcattcctgcc
attccattcaacgttaacaaatccaatctcaatcaccataccatgatgtctgtactcttg
ctcattgtgattgatagatcgcaacagccatacgatccacacaccaatgaatcatggcca
ttcacaatcgagcaacagggtcaagtatgcgtactgctcgccaaatgctttgaaaagcgt
ctcatcaaatcgatagagccaactctattgggccgtttggtgggtattctctcggttcca
cccattgcatcggctgcacccatctataaccgaacggaccgtcaatccagtctcttggga
gtgctcatgaactcgtcgcccaaagactatgactctgacaaactattggtcattgccgaa
ggaaatgaattgtatcgcgttgctcaatacatctatagccagcaacgccaatatgccaag
atggtggtctgtcaaattagagacccagacactcgtgcccaaacctttgactatgttcgt
caactcctcgagaatcccgccctcaacgacgccgatcgtcagactgttcgtcaaacaacc
atctctaatcttgctcatctcattgtggtcgacagtacagccactgcccaactcattatg
gactactttgcatcggatcacgaaaagattgtcaaagagttgggtcagttccccaagtta
caatacacctatttggttggtctcttgggtaacgatagttcctctcgtgtcgccatccaa
caacgtactggcatttacatctcaaatgaaacttatgaattatacattaaattaatgtgc
atgtattcatctgatctagtttataaatatctagtttctcatgatgattatccattagat
gcttgtttaaagatttgtcaacaatataataattttgaaggtgctacttatttattggaa
agaacaggtgatgtttacaaggcattggaaatgattgtaacagtattgaaaaagaagatt
gaggatattttgaaacatttctcaaatgtatatgccaatgtcaagaatctaaagaatgaa
aaagcgacagccatcccaattgaaaaggaaattatggatactttaaatactgctattgct
ctttgtcaaagaaactctcaaaaattacaaatatctgaaaatcaaatgatttggtttaga
ttattagatacaattgtattatttgtaagaaaagttaaacaatcaatgataaatagtaat
tcaaatagtccgttattacttgcagatgatagaactccaggaggttggtcaaagggatca
ctcatttcttcaccacaacaatctcaatctccatcacttgtaccattgactttggatcca
aatggcaacattgatacttcttcttcctcttcttcctctttgatcaacaatattaattta
ttacaacaaaaaccaaagagtgccatctatgtcaaatgtactggtttcctaaatagactc
attcatattattctcaatagtatgatgggatcggttgcattgccattgattctcaccaag
attgtaaatgaccacggtagtgatgagtttggtgactttaaggcaatcatcactggcatg
ttggatacttgtacgtttgagactagtattcttcacaccgccaaccaactcatccaaaat
gacatgtacaataccactcgatcctacattagacaacgtagcaaggcatattctccggtc
atgcgaaagtgtgtcatgtgtagccgacccattggcgatttcccagcctcgtccaacaac
caacaggttcctcttgatctcgttgtcgtctttcaatgtaatcacgccattcactctact
tgcatgggcaagcattcagcatgcccattgtgtagtaaagacaatgaaaatgctgaaaac
aatggttcaaacaacaaaaagaaaaaagagaaatcaaataataataataatattaatagt
agtagcaaccctaaccaacaaaaacaaccaaatcaaccactttcacccattctttttgac
cctaaaaagattagacaagacaaggacggtggtcaaggaaatacttatttagaaagactt
tcaaattatactaaattgaacaagagaaatacttattcttattataatacaaacaatatt
cttaaaagtaaaagtagtgacgatcatcaactctatagtccaattatttccaaacaagct
tctagatattctcaacattatcaacaacaacaacaacaacaatatcaacaacaccaacaa
caacaacaacaatatcaacaacaacattcaacacaacagagaactaatagacctaccact
tcaaatacctcttcacaatcaaaatatacaagagaataa
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integrated database retrieval system
