Cavenderia fasciculata (cellular slime mold): DFA_03499
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Entry
DFA_03499 CDS
T02668
Symbol
dhx8
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_03499 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_03499 (dhx8)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DFA_03499 (dhx8)
Spliceosome [BR:
dfa03041
]
Complex C
Other components
Step II factors
DFA_03499 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
S1
WHD_HA2
DEAD
AAA_22
GIPC1_GH2
AAA_30
AAA_19
nSTAND_NTPase5
AAA_16
nSTAND3
T2SSE
Cas3-like_C_2
PhoH
Motif
Other DBs
NCBI-GeneID:
14876796
NCBI-ProteinID:
XP_004363102
UniProt:
F4PHR7
LinkDB
All DBs
Position
Unknown
AA seq
1152 aa
AA seq
DB search
MDKLERIELESQICMELENFIGSSDKVLAEFIISLAEANPNLSDFNNALAENGAEFPESL
VAHLLNLVNKMNPKNRKTNTSTSSTSKQSSEWDKTDAADPQKLAAKFPALSIPNTKQFLE
GKVLDMVQEEKKNRDINRDNNSSSSSSSRDNDRDRGRDSNRDNNDRDRERGRSRERERDN
GGRRDNGGRKELDKDAELNKIYSGRITTINDYGCFVSLEGIVGKKEGLVHVSQITKARIN
NPSEIVKRNQNVKVKVLSVVGSRVSLSIKDVDQETGRDLNPQANQQSQQPIKSISGRDDR
DRFNPSKPQQQQRSGNDDQDNHNNQKSRKRMTSPERWEYKQLIAAGVIKATDLPNYDEEA
GALMPDDEENEEVEVELNEEEPVFLKGTRGSMQQMSPIKIIKNPNGSLQRAAMTQATLAK
ERKEEKDIIRNEMMDNIPKDLNLPWEDPMAGQHERHIAQELRGLAAPVAEMPEWKKTTQQ
NVTYGQITSRSIKEQRESLPFFPLRDAFLQAVESNQLLVVIGETGSGKTTQMTQYLAEAG
YASANGRIGCTQPRRVAAMSVAKRVAEEYGCRLGEEVGYAIRFEDCTSPSTVIKYMTDGI
LLRECLLDPDLSSYSVLILDEAHERTIHTDVLFGLLKQALKRRKDLKVLITSATLEADKF
CKYFMNSQLFIIPGRTHPVDIRYTKEPEADYLDAALVTVMQIHLSEPPGDILLFLTGQEE
IDAACQTLYERMKALGSNVPDLLILPVYSALPSEMQTKIFEPAPPGSRKVVIATNIAETS
LTIDGIYYVVDPGFSKQKCFNPKNGMDSLVVAPISQAAARQRSGRAGRTGPGKCYRLYTA
NAFENEMLPSSIPEIQRTNLGNTVLTLKAMGINDLIGFDFMDPPPVQTLVSAMEQLYALG
ALDEEGLLTRQGRKMAEFPLEPQLAKMLIASVELGCSDEILTIVAMLSVQNVFYRPKEKQ
ALADQKRAKFYSAEGDHLTLLAIYEGWKASKFSNPWCFDNFVQVRSLKRAQDVRKQLITI
MDRYKLDIVTCGRNHNKIRRAICSGFFVNAAKKDPNEGYKTMVEGQPVFIHPSSCLFQKN
PDWVIYHELVMTTKEYMRDVITVDPKWLVELAPKFFKLADPNKISKRKKKEKIEPLWDKY
RDPNEWRPSKRR
NT seq
3459 nt
NT seq
+upstream
nt +downstream
nt
atggataaattagaaagaatagaattagagtcacagatatgtatggagttggagaatttc
attgggtcgtcagacaaggtgttggcagagtttattatcagtttggctgaagccaaccct
aatctatcagactttaacaatgcattggcagagaatggagctgagtttcctgaatcattg
gttgctcatctcttgaacctcgtcaacaagatgaacccaaagaatagaaagacaaacact
tcaacatcatcgacctctaagcaatcatcggaatgggacaagaccgatgctgctgaccct
caaaagttggctgcaaagttccctgccctctcaatcccaaatactaaacaatttcttgaa
ggaaaggtattagatatggtacaagaagaaaagaaaaatagagacattaatagagataat
aatagtagtagtagtagtagtagtagagataatgatagagatagaggtagggatagtaat
agagataataatgatagagatagagaaagaggtagaagtagagaaagagaaagagataat
ggtggaagaagagataatggtggaagaaaagaattggataaagacgcagagttaaacaag
atatatagtggtagaattacaacgatcaatgattatggctgttttgtttcgttggagggg
atagtgggaaagaaggaaggtttggtacatgtgtcacaaatcactaaagcaagaataaac
aatccgtcagagattgtaaagagaaatcaaaatgtaaaggtcaaggtgttgtcggtggtt
gggtcacgtgtcagcttgtcgattaaggatgtcgaccaagagactggacgcgatttaaat
ccacaggcaaaccagcaatcgcaacaaccaatcaagagtatatcgggaagagatgaccgc
gatcgtttcaacccatcgaaaccacaacaacaacaacgatccgggaatgatgaccaagac
aatcataacaatcaaaagtcgcgaaagagaatgacgtcacccgagcgatgggaatacaag
cagctgattgctgcaggcgttatcaaggcaactgatctccccaattatgacgaagaggct
ggtgcgttgatgccagacgacgaagaaaacgaagaggtcgaggttgaactaaacgaagag
gagccagtgtttctcaagggcacaagagggtcgatgcaacaaatgtcacccattaaaatc
atcaagaaccccaatggatcgttgcaacgtgctgccatgacgcaggcgacgttggccaaa
gagagaaaggaggaaaaggatattatcagaaacgaaatgatggataatatccccaaggac
ctcaatttgccgtgggaggatcctatggccggtcaacacgaacgtcacattgcacaagag
ttgcgtggtctagctgcacccgttgcagaaatgcccgagtggaaaaagacaacccagcaa
aacgtgacatacggacagattacgagccgttcgatcaaggagcagagagagtcgttacca
ttctttccgctgcgcgacgcttttcttcaggctgtcgagagtaatcagttgttggtagtt
attggagagacgggttctggaaagacgacacagatgacacagtatcttgctgaagcaggg
tatgcatcggccaatggaagaattgggtgtacacaaccacgtcgtgtggctgccatgtcg
gtagctaagcgtgtcgctgaagagtatggatgtcgtttgggtgaggaagtaggttacgcc
attcgttttgaagattgcacatcgccatcaaccgtcatcaagtacatgaccgatggtatc
ttgctcagagagtgtttactcgatcctgatctctcctcctactctgtactcatccttgat
gaggctcatgaacgtaccattcacactgatgtcttgtttggtctgctcaagcaggctctc
aagcgtcgtaaagacctcaaggtactcattacttcggccacgctcgaagccgacaagttt
tgcaagtattttatgaacagtcagttgtttatcatccccggtcgtacccatcccgtcgat
attcggtacaccaaggagccagaagccgactatctcgatgctgcactcgtcacagtcatg
caaatccatctcagtgagccacccggcgacatcctccttttccttacgggtcaagaagaa
attgatgctgcctgtcaaactctctacgaacgtatgaaagcacttggatcaaatgttccc
gatcttttaatccttccagtttactctgcacttccaagtgaaatgcaaactaaaatcttt
gaacctgctccaccaggatcaagaaaagttgttattgcaaccaatatagctgaaacttca
ttgacaattgatggtatttattatgtggttgatccaggattttcaaaacaaaaatgtttt
aatccaaagaatggaatggacagtttggtggttgcacccatttcacaggctgctgctaga
cagagatcaggtagagctggtcgtactggacctggtaaatgttatcgtttgtacacagcc
aatgcatttgagaatgaaatgcttccgtcatccattccagaaatccaacgtaccaatctt
ggaaatacagtgttgacactcaaagcaatgggaatcaacgatcttattggctttgatttc
atggacccaccacccgtacagacattagtgtcggccatggaacagctctatgcacttggt
gcactagatgaagaaggtttgttgaccagacagggcagaaagatggccgagtttccactc
gaaccacaactcgctaaaatgttgattgcatcggtcgagttgggatgctcagacgagatt
ctcacaatcgtcgccatgttgtcagtacaaaatgtcttttatcgacccaaagaaaaacaa
gcattggccgatcagaaacgtgctaaattttacagtgccgaaggtgaccatctcacactg
ctagccatctacgaaggttggaaagccagcaagtttagcaacccatggtgctttgataac
tttgtacaagtacgttcactcaagcgtgctcaagatgtgcgtaaacaactcattaccatt
atggatcgttataaattggatatcgtaacatgtggtagaaaccacaacaagattcgtcgt
gctatttgctctgggttctttgtcaatgccgccaaaaaggatccaaatgaaggatacaag
accatggtcgagggacagccggtattcatccatccgtcatcttgtctctttcaaaagaat
cccgattgggtcatctaccacgaattggtcatgaccaccaaagaatacatgagagatgtc
atcactgtcgaccccaaatggttggtagaactagcacccaaatttttcaagttggccgat
ccaaataaaatatcaaaacgtaaaaagaaagaaaagatcgaaccactttgggacaagtat
cgtgatccaaatgaatggagaccaagtaaaagaagataa
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integrated database retrieval system
