Cavenderia fasciculata (cellular slime mold): DFA_03549
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Entry
DFA_03549 CDS
T02668
Symbol
rpb9
Name
(RefSeq) RNA polymerase II core subunit
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03020
RNA polymerase
dfa03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
DFA_03549 (rpb9)
09124 Replication and repair
03420 Nucleotide excision repair
DFA_03549 (rpb9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_03549 (rpb9)
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_03549 (rpb9)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
DFA_03549 (rpb9)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
DFA_03549 (rpb9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Zn_ribbon_RPB9
Zn_ribbon_TFIIS
STL11_N
Motif
Other DBs
NCBI-GeneID:
14877006
NCBI-ProteinID:
XP_004363151
UniProt:
F4PHW6
LinkDB
All DBs
Position
Unknown
AA seq
108 aa
AA seq
DB search
MNFCGECNNMLYPQADKINKTLLLVCKICDHQEEASNSCVYRNEIKHSTDERTQVLHDIS
LDPTLPRTKGAKCHACDGREAIFFQSMGTKSDKMTLYFIDKTDRSYPS
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atgaacttttgtggtgaatgtaataatatgctttatcctcaagcagataagataaacaag
actttattgttggtttgtaagatttgcgatcatcaagaagaagctagtaattcatgtgta
tatagaaatgaaatcaaacattcaacagatgaaagaactcaagtattacatgacatatca
ttagatcctacgttaccgagaacaaaaggtgcaaagtgtcatgcatgtgatggtagagaa
gctattttcttccaatctatgggtacaaagagcgataagatgacactatactttattgat
aagacagatcgatcttatccttcctaa
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