Cavenderia fasciculata (cellular slime mold): DFA_03553
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Entry
DFA_03553 CDS
T02668
Symbol
nup98
Name
(RefSeq) putative nucleoporin 98
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
DFA_03553 (nup98)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_03553 (nup98)
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_03553 (nup98)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
DFA_03553 (nup98)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
DFA_03553 (nup98)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nucleoporin_FG
Nup98_GLEBS
Csm1_B
Motif
Other DBs
NCBI-GeneID:
14877010
NCBI-ProteinID:
XP_004363155
UniProt:
F4PHX0
LinkDB
All DBs
Position
Unknown
AA seq
1859 aa
AA seq
DB search
MSFFGQAPSNPFSTNKPAGSTMFGSTPSSGGGLFGTTAPTTTTSSFGAGGFGGGFGGSAA
TTASNPFGATSTGFGAQPTTTAAPFGTSFGAQPAQTSSPFGSGGFGAQPAQTSNPFGAQP
TTAAAPFGGGFGAGSTTSTFGAQPTQASSPFGGGFGAQPTQQASSPFGFGSTATSGTLLG
AQPTQQTSSPFGTTSFGAQPTQASISPFGQQQGFNSGGQFNGVKPVGTGNPPYKETSEGG
VNLVSINAMEAYNGKSVEELRFEDYTKKEQTGSMGGGAGAISPFGSTLGQPSASSSPFGS
TLGQPAPAQQSNMFGAPTTQSNPFGSTTTTQQSSNPFGGLGSLGNPSATSSPFGSLGGLG
QQQQQQPTTQFNMTATQSNPFGASSTPTPFGQSSSLLTSGFPSTTSQPTSGGGLFGAVTQ
QQPSSGGGLFGQPTAQTSTPGGGLFGTQPATSGGGLFGQQQTTPQSTTGGGLFGPTSTTG
GGLFGQPTSQPASGGGGLFGTTTQQQQPSSGGGLFGNPQQTTPTSTLFSTPSTSSTATPS
LGLFGQPAQSTSGGLFSQPTQPSTGGLFSQPAQPSTGGLFSQPAQPSTGGGLFGNQPTAS
SGVPSLGGGLFGGMGSSATPSLSLGTPSMTSGGMFGQQQPSLTATMPTNGGLFGSMQPTA
GTIQTTSVAQVAPIQITNDSISSQSPYFPVPASPFVQLVKSIKSVDSSPSTTGADSSASS
SVAQLGRSTLSYHSYSGRPKLVPRRNAGFDFPTNQPSDSAVLANQPSTTSYLNNKPVSTL
EKFVSKYSKTLNVNTSGETLQSLMPTQPKLYPTLDNPQQSSILSSSNNNQSNINNNNQSS
SQQPTQQQQQQVQQQQPIQQQPAQQQQVQQQQQQPIQTSPKKSVTFINPHAPILTKPGYY
CRPSLRELESMTESELASVREFTIERKGYGSVMFLGSTDVRDLNIDEIVTIDVREVSIYP
DEETKPPVGQGLNKRSMVTLQQCWPKASDGSYRKSENYLARYKNALQRKAAEEQFTFIEY
DGVSGEWRFKVEHFSKYSAPDDEFEDEDGEGEQQVQQQPQQQLISPQQPIISSKPKPKFS
ANISLDNDNETEITGLPSKYMKIPNQKRILNENKGLFNVDVPSNQSQIAPIQQPKIPVYD
PLVLNNPNTKVQRILSPINPTFEQINLQSPKSTILKPSHFNTRQVQSQEQPFKKAQQLES
SSAAKIKLDSKQFDVKVASKDSIFKGLVNNGQKTDASLILGRSFRVGWSPNGQFIVPSGK
SIKTLTISNITTQSTTKVEPIVKSLKNHLTNSSVCSKDNRQGWFTLSKVQEQLQAYSNDD
HYKHIWKLIVSLWGTEPETAYSEEMKRKLNLNQWLKDVIAPIAEKEQQQIKKKANHNYLE
VLFSNLSAKKLKESIALANANKDYRLAIMMTQLWGSNESKILLTEQLRLWEEQGMLEKMD
VKRIEIIKLLAGDIDEVYQNVNDWYRSFALDFWFRYSFDHPLSEVIKSYDISFLNGISKS
PLPTYTNINSNEDNLFFDPCYLLLKLFSNERFDNFKALFYPENNGLDHFDYWLPWSLYTV
LRSLPSLNKQSDLSNQYLLHSSFATQLERLGLWQWSIYILSHIPDHFTFFREEAMKSCIS
RHIHTIKEDGDEKKFLTKSLLIPETWIDEAFAWYNGYQHKEQNQIDYLLKSGQFSEAHNL
IFNHFGPNYIISRKYDKLRDLLKKFQGHINDIGLWKFGGELFLNYIMLVTNFKECFGALE
TLPKSLDPKAIHQKLYKTTLDSSLFLAHLSELSQVSIIENSTKLFKITLSEMTKRLLEYC
QETNELFELDRIRLNVLPIGFVRSLSKLPITEDQRLCSLESLSQQCQNNILDSIYANIN
NT seq
5580 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctttggtcaagctcctagtaacccattctcaactaataagcctgcaggttca
actatgtttggtagtacaccttcatctggtggtggtctgtttggtaccaccgctccaact
acaactacttcatcatttggagcaggtggatttggaggaggatttggaggatcagcagca
acaacagcatctaacccatttggagccacttctacaggatttggggctcaaccaactaca
acagcagctccctttggaactagttttggagcacaaccagcacagacatcatcgccattt
ggaagtggtggttttggagcacaacctgctcaaacttcaaatccatttggagcacaacca
acaacagcagctgcaccatttggaggtggttttggagctggtagtacaacttcaacattt
ggagcacaaccaacacaagcatcatcaccatttggaggtggttttggagcacaaccaaca
caacaagcatcatcaccatttggatttggatcgacagctacttctggtacgctattgggc
gcacaaccaacacaacaaacatcatcaccatttggaacgacttcatttggtgcacaacca
acgcaagcatccatatcaccatttggtcaacaacaaggtttcaattcaggtggtcaattt
aatggtgtcaaaccagttggaactggtaaccctccctacaaagaaacttcagaaggagga
gtaaatttagtatctataaatgcaatggaagcatataatggtaaatcagttgaggaactg
agatttgaagattatactaaaaaagaacagactggtagtatgggtggtggtgctggtgct
atcagtccatttggaagtacacttggacaaccatcggcatcgagcagtccatttggaagt
acactaggacaacctgctccagcacaacaaagcaatatgtttggagcacctaccacacaa
agcaacccatttggatcgaccactacaacacaacaatcttctaatccatttggtggattg
ggatcattgggcaatccatctgcaacctcttcaccatttggtagtttgggaggattgggt
caacagcaacaacaacaaccaacaacacaatttaatatgactgctactcaatccaatcca
tttggtgcatcgtcaacgccaactccatttggtcaatcttcttcattgttgacatcaggg
ttcccatcgactacatcacaaccaacaagcggtggtggtttatttggtgctgtcactcaa
caacaaccttcatcgggtggcggtctttttggacaaccaactgctcagacttctacacct
ggtggtggtttgtttggtactcaaccagctacctctggtggcggtctatttggccaacaa
caaacaactccacaatcaacaaccggtggtggtctatttggaccaacttcaacaactggt
ggaggactctttggacaaccaacttctcaaccagcaagtggtggcggtggattgtttggt
acgaccacacaacaacaacaaccatcgtcgggtggtggtctatttggcaacccccaacaa
accacacctacatctaccttgttctcgaccccctctacttcgtcgactgccaccccatct
cttggtctgtttggtcaacctgctcaatcaacctctggcggtctctttagtcaacccact
caaccatctaccggcggtctatttagtcaacctgctcaaccatctacaggtggtctcttt
agtcaacctgctcaaccatctaccggtggcggtctctttggaaatcaaccaactgcaagc
tcgggtgtacccagtttaggtggtggtttgtttggcggaatgggtagctctgcaacacca
tccctcagtcttggcacaccaagtatgacctctggcggtatgtttggccaacaacagcca
tctcttacagccaccatgccaaccaatggtggtctctttggatcgatgcaaccaaccgct
ggcactatccaaactacctctgttgcacaagtcgcacccatccaaataaccaacgacagt
atttcctcgcagtcgccatacttcccagtacctgcatcgccattcgtccaactggtcaaa
tcaattaaatcagtcgactcttctccatcgaccacgggtgccgactcttctgcctcatcc
tcggttgctcagcttggtcgttcaacactctcctatcacagctactctggtcgccctaaa
ttggtgccaagaagaaacgccggctttgatttccccaccaaccagccatccgactctgcc
gtattggccaaccaaccatcgaccacctcgtacctaaacaacaagcccgtctcaacattg
gagaaattcgtttcaaaatactcaaagactttaaatgtaaacacttctggtgaaacctta
caatctcttatgccaactcaaccaaaactttatcctactcttgataatcctcaacaatct
tcaatcctatcatcttcaaataataatcaatcaaatattaataataataatcaatcatca
tcccaacaaccaactcaacaacaacaacaacaagttcaacaacaacaaccaattcaacaa
caaccagcacaacaacaacaggttcaacaacaacaacaacaaccaattcaaacatcacca
aagaaatcagtaacatttattaatccacatgcacccattttaaccaaaccaggatattat
tgtcgaccaagtttacgtgaacttgaatcaatgacagagtcagagttggccagtgtacgc
gagttcacaattgaaagaaagggatatggttccgttatgtttttgggaagcacagatgtt
cgtgatttaaatatcgacgagattgtgacgattgatgtacgtgaagtatccatctaccca
gacgaggaaaccaagccaccagttggacaaggtctcaacaagagatccatggttacattg
caacagtgttggccaaaggcttctgatggtagctatcgtaaatctgaaaattatctcgct
cgttacaagaatgcacttcaaagaaaggctgccgaggaacaatttacatttattgaatat
gacggcgtcagtggtgaatggcgtttcaaggttgaacatttttcaaaatactctgctcca
gatgatgaatttgaagatgaagatggtgaaggtgaacaacaagttcagcaacaaccacaa
caacaattaatttcaccacaacaaccaattattagtagtaaaccaaaaccaaaattctct
gcaaatatttcattggacaatgataatgaaaccgaaatcactggattaccttcaaaatat
atgaaaattccaaaccaaaaaagaatattaaatgaaaataaaggattattcaatgttgat
gttccatcaaatcaatcacaaattgccccaattcaacaaccaaagatcccagtttatgat
ccacttgttcttaataatccaaatactaaagtacaaagaatattatcaccaattaatcca
acatttgaacaaattaatttacaatcaccaaaatctactatattaaaaccaagtcatttt
aatacaagacaagtacaatcacaagaacaaccatttaaaaaggcacaacaattggaatca
tcatctgccgcaaagattaaattggatagtaaacaatttgatgtaaaggttgcttcaaaa
gattcgattttcaaaggattggtaaacaatggacaaaaaacagatgcatctttgatttta
ggaagatcatttagagttggttggagtccaaacggtcaatttattgttccaagtggaaag
tctattaaaactttgaccatttccaatatcactacacaatcaacgaccaaagtcgagcca
attgtaaaatcactaaagaatcatctcaccaacagttcggtttgttcaaaggataaccgt
caaggttggttcaccctctccaaggttcaagaacaattgcaagcatacagcaacgatgac
cactacaagcacatttggaagttgattgtatccttgtggggcacggaaccagaaactgcg
tatagcgaagagatgaagagaaaattgaatctcaaccaatggctcaaggatgtgattgca
cccattgccgaaaaggaacaacaacaaatcaaaaaaaaggcaaaccacaattatttggaa
gttttgttctccaaccttagtgccaagaaactcaaggaatctattgccttggccaatgcc
aacaaggattatagattggccattatgatgacccaattgtggggtagtaacgagtcaaag
atccttttgaccgaacaactccgactttgggaagaacaaggaatgttggaaaagatggac
gtaaagagaatcgagattatcaaactattggcaggtgacattgatgaggtttatcaaaat
gtcaatgattggtatcgtagttttgctttggacttttggtttagatactcttttgatcat
ccattgtctgaagttatcaaatcttatgatatctcttttctcaatggtatctctaaatct
ccacttccaacctacaccaacatcaatagtaatgaagacaatctcttttttgacccatgt
tatctattgttgaaattattttcaaatgaaagatttgataatttcaaagcactcttttat
ccagagaataatggtttggatcattttgattattggttaccatggtctctctacactgtc
cttcgttcattaccttcactcaacaaacaatcagatcttagtaatcaatacctactccac
agttcttttgctactcaattggaaagattaggtttatggcaatggagtatttatatttta
tctcatattcctgatcattttactttttttagagaagaagcaatgaaatcatgtatttca
agacatattcatacaattaaagaagatggagatgaaaagaaattccttacaaagagttta
ttgattcctgaaacttggattgatgaagcttttgcttggtataatggttatcaacacaag
gaacaaaaccaaattgattatcttttgaaatctggtcaattctctgaagctcataattta
atttttaatcattttggtccaaattatattatttcaagaaaatatgataaacttagagat
ttattaaaaaaattccaaggacatattaatgatattggattgtggaagtttggaggtgaa
ttatttttaaattatataatgttggtaacaaactttaaggaatgttttggtgcgttggaa
actttaccaaagtctttagacccaaaggcaattcaccaaaaactttacaagacaactctt
gattcttcactatttttagctcatctaagtgaattatctcaagtctctattattgagaat
tcaactaaattatttaaaataacattaagtgagatgacaaaaagattattagaatattgc
caagagacaaatgaattgtttgaattggatagaattagattaaatgttttgccaattgga
tttgtaagatctctttccaaacttccaattactgaagaccaaagactttgtagtttagaa
agtttatcacaacaatgtcaaaataatatattagattctatttatgcaaatattaactaa
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integrated database retrieval system
