Cavenderia fasciculata (cellular slime mold): DFA_03772
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Entry
DFA_03772 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfa03016
]
DFA_03772
Enzymes [BR:
dfa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
DFA_03772
Transfer RNA biogenesis [BR:
dfa03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
DFA_03772
Prokaryotic type
DFA_03772
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B_4
Anti-Pycsar_Apyc1
Lactamase_B
Motif
Other DBs
NCBI-GeneID:
14870450
NCBI-ProteinID:
XP_004357101
UniProt:
F4Q0C7
LinkDB
All DBs
Position
Unknown
AA seq
899 aa
AA seq
DB search
MVKAFIEASGDNVETSPSLYVFFDRDRYLFECGEGTQRYVTQRNSFSLAKLNAIFLSSLS
WDSVGGVMGSLLTMSDIGTNEVVIYAPVGFSAILQAAKPFLKRSLIVHVKEVVSSHQFQD
ESLRVQILPISNKPNTEQQQQQQPSVNHITIGGNSQSSSSSNNNNNKTPQSDDENESSSS
SFDPINAECTTRQGSPQSTILSTTTTSNLQEDREDQTRETKRKKTEESPEQSLRFTVDQD
TSSSPEQHKSLDSPRKSIDSDVVHCYIVRSNEFAGTFLPDKAKELGIRPGPLFKRLVAGE
SLTNQDGILVHPHQVMEPASPSSNIGIIRCPTIEYIQGVIGCKEFSEYFRKDDPTNAKKI
LTVFHIAPKVVLNHPDYLTFIERFGDETKHIIMNQESCQYFPSFQRSEQFVTQLSLLTSS
LFPSGVKPRQVSPILTPQNEARISPSLAKNMLPINKITRVTLGPPKQAGEIEFLSLSDCI
NDGLITTPDNTNQQNNQQQQNISEQSNNQTEDSEMNYKVAKQVVEKCVLSNSKFSSQMEE
IKSMEAKLESMEKLDSEMYPRILFTGTGSAIPSLLRNVTGHHVLMETGAGMLLDAGEGTF
GQMSRFYGPDKIDYVLAGLRVIWISHLHADHHLGTPGILQKRLELEKRDNIKLPPVIVIA
PQSIITWLNKTDKVRPLGHIGISIDRMANEIKTLKPALIDLGIVEIINVPVIHCYKAFGI
VVTLKNGFKFTYSGDTRPCPLLASEGKSSDVLLHEATMSDDLWEEAIKKRHSTVGEALKV
GKDMGAKFTILTHFSQRYPKMPQLEQNQRARFGLAFDLLQVAPFQYPLLESLIQPANTLA
EFERLKDIQERNDTVSTSVIPKKVGAKQKQQQQQQQKQQKRKQIDNDDKENEKEKEKEN
NT seq
2700 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaagcatttatagaggcatcaggcgataatgtagaaacctctccttcactatac
gtctttttcgatcgtgaccgatacctgtttgaatgcggtgaaggtacacagagatatgtg
acacaacgtaacagctttagtttggctaaactcaatgctatattcctctcgtcgctttca
tgggactctgtaggaggtgtcatgggctctctgctcactatgagcgatattgggaccaat
gaggtggtcatttatgcaccggtcggattctcggccatcttacaagccgccaaacctttc
ctcaagagatcgttgattgttcatgtcaaggaagtagtctcttcacatcaatttcaagat
gaatcattacgtgttcaaatcttaccaatttcaaataaacccaatactgaacaacaacaa
caacaacaaccatcagttaatcatattacaattggtggtaattctcaatcatcctcttct
tctaataataataataataagacaccacaatcagatgatgaaaatgaatcatcatcatca
tcatttgatccaatcaatgcagaatgtacaacaagacaagggtcacctcaatcaaccatt
ctctcaactacaacaacatcaaaccttcaagaagatagagaagaccaaacaagagaaaca
aagagaaagaaaactgaagaatcaccagagcaatcacttagatttacagttgaccaagat
acatcatcatcaccagaacaacacaagtcattagattcaccaagaaaatcaattgattca
gatgttgtacattgttatatcgttcgtagtaatgaatttgcaggaacttttcttccagac
aaagcaaaggaacttggaattcgtccaggtccactttttaaaagattggtagctggtgaa
tcacttaccaatcaagatggtatattagttcatcctcatcaagttatggaacctgcttct
ccttcttctaatattggaattattagatgtccaacaattgaatatattcaaggagtaatt
ggatgtaaggagttttcagagtattttagaaaagatgatcctaccaatgctaaaaagata
ttgacagtatttcatattgcacccaaggtggtattgaatcatcccgattatttgacattt
atagaacgatttggagatgaaaccaaacacattattatgaatcaagagagttgtcaatac
tttccatcattccaacgttctgagcaatttgtcactcaactatcactcttgacatcatcc
ctcttcccatctggtgtcaaaccacgtcaagtttctcccattctaacaccacaaaatgaa
gctcgtatttctccatcactcgccaaaaatatgttaccaatcaataagatcactcgtgta
actttgggtccaccaaaacaagctggtgaaattgaatttctttctttatctgattgtata
aatgatggtttaattactactcctgataatactaatcaacaaaataatcaacaacaacaa
aatatttctgaacaatctaataatcaaactgaagattcagaaatgaattataaagtagca
aaacaagtagttgaaaaatgtgttttatcaaattcaaaattttcaagtcaaatggaagag
atcaaatcgatggaagccaagttggagagtatggagaaattggattcagagatgtatcca
agaatattgtttactgggacgggatctgctatcccatcattgttgcgtaatgtaactggt
catcatgtgttgatggagactggtgctggtatgttgttggatgctggtgaggggacgttt
ggacaaatgtctcgtttctacggtcccgacaagatcgactatgtgttggccggtctacgt
gtcatttggatctcccatttacacgccgatcatcatttgggtacaccaggcattctccag
aaacgtttagagttggaaaaacgtgataatatcaagttgccacccgtcattgtcattgca
ccacagtcgattatcacatggctcaacaagacggacaaggtacgtccgttgggtcatata
ggcatttcgatcgatcgtatggccaatgaaatcaagacactcaagcctgctttaatcgat
ctgggtattgtcgagattatcaatgtgcctgtgatccattgttacaaggcgtttggtatt
gtcgtcacactcaagaatggcttcaagtttacttattcaggcgatacccgtccatgtccg
ttgttggcttcagagggtaaatcgtcagacgtactcttgcacgaagcaaccatgtcggat
gacttgtgggaagaggccatcaagaaacgtcacagcaccgttggtgaagcactcaaggtt
ggaaaagacatgggtgccaagtttaccatcctcactcatttcagtcaacgttatcccaag
atgcctcaactcgaacaaaatcaacgcgcgcgattcggacttgcctttgatctcttacaa
gtcgctcccttccaatacccacttctcgaaagcttgatccagcctgccaacactctagcc
gaattcgaaagactcaaagatatccaagaacgtaatgatacagtctctacttctgtcatt
cctaaaaaggtaggagctaaacaaaagcaacaacaacaacaacaacaaaaacaacaaaaa
agaaaacaaattgataatgatgataaagaaaatgaaaaagaaaaggaaaaggaaaattaa
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