Cavenderia fasciculata (cellular slime mold): DFA_03857
Help
Entry
DFA_03857 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa04120
Ubiquitin mediated proteolysis
dfa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
DFA_03857
04120 Ubiquitin mediated proteolysis
DFA_03857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dfa04121
]
DFA_03857
Enzymes [BR:
dfa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
DFA_03857
Ubiquitin system [BR:
dfa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
DFA_03857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4_2
Prok-RING_4
zf-RING_5
zf-RING_16
zf-ANAPC11
zf-C3HC4_4
SBP_bac_3
zf-RING-like
New_glue
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
14870770
NCBI-ProteinID:
XP_004366267
UniProt:
F4Q0L2
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MKVLRPSLPVVAEPINVDLETLFNKTISFILHSVSTFYKVQERESEYVSDRLKSSITDTI
LALTIFRDHFNAQFVFLFLLLLFFQVFHWLTKNRVEYIEHTPYNFLNQCRLCALMLFLLG
GDFGFIYYAVLSLMREGPNVMILFGLEFGLLVVTNISTLITFFINIEGIKREGRWDNKGL
YILYLEFVTESIKAALYLIFFFVTLFYNYGLPIHIIRQIFISLKTSIRRFNDIRKYRNIT
NERFADATEQELANTDRICIVCREDMTHGKKLPCGHILHLSCLRSWLERQQSCPICRADV
LADPPVVNHHAAQQQQAQQQQPAVDVAAPAQAQVQPLDQQQQQQQQQQQQQQHPAAGAAA
VAPLQQLPNFRPQIANPLLREMLLQNAVRNGRLPMLNMNNNNNMDGQQQQQQQHTIAINP
NQLLNQTTQQNQLLQQRLQQQTLIANAASSTTEYNPLQHLMFIQQHLQYLCQQTELLSLQ
LSLNPQWTNNMNNMNNNNNIQQQQNNNNIDSSSSKDEKKKEKEKNVRFTPPTPTFSSTMA
TYIKSKEHIYDEPTIEEEDEEEEEEEEEEEEEENNYPSTSTTSTTSTTSTTTTTTTNFSS
NIDSNSPPKEEKVVKSQSDDWNEQLRQRINALHKEQQREDNNDDQDDQ
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtactcagaccttctttgcctgtcgtagccgagcccatcaatgtcgatcttgaa
acattattcaataaaacaatatcttttatccttcattctgtctcgactttttataaagta
caagaacgtgaatctgaatatgttagtgatagattaaaatcatcaattaccgatactata
cttgcattaaccatctttagagatcatttcaatgcccaatttgtattcttattcctttta
ttattattctttcaagttttccattggttaacaaagaatcgtgtagaatatattgaacat
actccatataactttttaaatcaatgcagattgtgtgcattgatgttattccttttgggt
ggagactttggttttatttattatgccgtcttatcattaatgagagagggtccaaatgtt
atgatattatttggtttagagtttggattattagttgtaacaaatatatcaacattgatt
acatttttcattaatattgaaggtatcaagagagaaggcagatgggataacaagggattg
tacattttatatttggaatttgttaccgaatccatcaaagctgcactctaccttatcttt
ttctttgtaactctattttacaattatggtttaccaattcacattattagacaaatattt
atttcattaaagacttcgattagaagattcaatgatatcagaaagtatagaaacattaca
aacgaaagatttgccgatgcaacagaacaagaactggccaacactgacagaatttgtatt
gtgtgtcgtgaggatatgacacatggaaagaagttgccgtgtggtcatattcttcatctt
tcctgtctgcgatcatggcttgaaagacaacaatcatgtcctatttgtcgtgcagatgta
ttggctgatccaccagttgttaatcatcatgcagctcaacaacaacaagcacaacaacaa
caaccagcagtagatgttgctgcaccagctcaagcacaggttcaaccactcgaccaacaa
caacaacaacaacaacaacaacaacaacaacaacaacatccagctgctggagcggcagca
gttgcaccacttcaacaactaccaaactttagacctcaaattgcaaatccacttcttcgt
gaaatgttgttgcaaaatgcagtcagaaatggtagattaccaatgttaaatatgaataat
aataataatatggatggacaacaacaacaacaacaacaacatacaattgcaatcaatcca
aatcaacttttgaatcaaacaactcaacaaaatcaattgcttcaacaaagattacaacaa
caaactttaattgccaatgcagcctctagtacaactgaatacaatccattacaacattta
atgtttattcaacaacatcttcaatatctatgtcaacaaacagaattattatcattacaa
ttatctttaaatcctcaatggacaaataatatgaataatatgaataataataataatatt
caacaacaacaaaataataataatattgatagtagtagtagtaaagatgaaaagaaaaaa
gaaaaggaaaagaatgtaaggtttacacctccaactcctacattttcttcaactatggca
acctatattaaaagtaaagaacatatttatgacgaaccaacaattgaagaggaagacgaa
gaagaagaggaagaagaagaagaggaggaagaagaagaaaataattatccttctacttct
accacatctacaacttctacaacttctactaccactactactactaccaacttttcctca
aacattgatagtaattcgccaccaaaggaggaaaaagtagttaaatcacaatccgacgac
tggaatgaacaacttcgacaaagaatcaatgcactacataaagaacaacaaagagaagac
aacaacgacgatcaagatgaccaataa
DBGET
integrated database retrieval system
