Cavenderia fasciculata (cellular slime mold): DFA_03904
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Entry
DFA_03904 CDS
T02668
Name
(RefSeq) WD-40 repeat-containing protein
KO
K24155
rabconnectin-3a
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
DFA_03904
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfa04131
]
DFA_03904
Membrane trafficking [BR:
dfa04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
DFA_03904
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
DFA_03904
RAVE complex
DFA_03904
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WDR55
EIF3I
Beta-prop_DCAF12
Beta-prop_CAF1B_HIR1
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_Vps41
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
14870260
NCBI-ProteinID:
XP_004366314
UniProt:
F4Q0Q9
LinkDB
All DBs
Position
Unknown
AA seq
2694 aa
AA seq
DB search
MTENITLGGGSGSTMFPNQIVTGAANPNPNTFACTHFNDDTYFAYSSSRNVYVLKGGSLR
VIQVLTGHKTDVTSIAWLNYHSKLLTASSTEIFVYDIVKNPQQPVQPSSSSSSETNKDNK
LEWERIMVIPNPFEINTMCWLNSNSFVVGGEYLALWKLDFDQIHKQYALTKQQMQKEQDN
PQSAAAASLGLHTSSTAMLGSASSYQISNKANIERMGLREQKIFRKQATIVWRSECSQPV
HHISCSPDGSLFATAGKCDRMLKVWYKQPKVAQTPDQDDSNASTTSTTSAATSTKTKGYF
KDHFNQLTSKEPKFKFTTQKQQEKDDEFNQNLAKQQQQQKLRAQQKQKRFEYESYGFIYL
PHPRAISWISWRMRDSSHHNILLTNCKDGVVRLWQQSLQSNRLQFNVSNIIHAGTESVDW
INCYSPLFLQQHHIYQQQQQQQSGSSSSSSSQPQSSTSSQPSTSSKQTTTATTTDGLEIR
PDLLTNLKNPILLRLKEGHLTRSKSIVDWILGVKQDGTLIMWKLKTDDSTSRQTSSISIW
INSPQILSPQEVGPNRIIALYQPLSISDNTPTSITICVNSFNGAISCRKFYIQNQNQTQI
SNTSPPSRCYGHKSSIRSINVSPASHYLSTVDRQNNIILWQTTDGTKIQAPYYLVDIGSI
GTSHSITWSSENNFCFSANKDGILVYHIDPHDNNKPLKLPIGIIDQSCIQNSDHEEFYEE
IHVVDCQPQLYRGISGKKNAPNFSFFIIGINNYGDKLTIWGVTVDYNQNGPQTTVSTSST
TSNSPFSLSSKLLATKTFSSEQKITCICPTPKGVADKMSTIQLFKQQENQNENENEKENG
HDDDNSSSTSTIEEYEDIPSHPICVTGSMDGIITVWSLSAFDTPQADNQSATGDDVYDEL
FKEKEDHEKSEVKNQDNDDNDDKDHHQGPYWKITELCHHAAYQQPVESVSPAYFGRFAST
PSMSAFHNYVINPVIHIWELESHTPKLQLEDTIKFYSDEEFEQQQQLVSLNIPTFASEAN
FSYQQSYDPFEHQSSNSNFSIKSGCNFSFATFADGTVSLATGFKNTIRVLRKPIDRSIGS
YNRSWMETHRYNDLSSQCVSIVWGKDRELFVASGNQILVFSKWMKPTEAFLSMYEGIYPS
IDTVYHQHSILSRPLPYYHPKLLTEYMMAGKFEKVENILMFISRFLISRFPFLLTDPNPV
QQQSIYDDDDSDEEKDYHQQPKPSSSSSTSAADQVDLSKPVFIPTVDIEDMLLDESDRPI
TDDNGMDHETNNGFKDKRQEEEQEELVLDKYNNNLSTSNDDLFNHANQDEKSFTKKQAAK
LNEILSNVRLAGLNSAEQIQLLALTDTYGQIGEMRGGLDENGQRFLLNVKIYQFLKRSMN
PTERPISLSAVDILWALHSECQETLLQNCFPTDPLWEDYRQLGAGLWIKNPITLKNTFEK
LAKTTYTANKDPSESALYYIALGKKGALVALHRAHKETKQVDFLLQDFTQQKWINLAAKS
AYLLQSKHRYDLAASMFLLAGDLKQATNLILQSKGDFQLAYAISRLYEGENGPTSRMILE
EHVIPHAKKTYDRSLLSVCQWLLKNYEDSLKILLPSTEINEASKKLDYDQVQHLSAYNSP
TNTSGNNSPLPTMGGGFGRIPSVISLSNYAMSSSPLLSRNQQTQKSTTTNSIASQLRTSE
MGPSALYFFRYLRAHILLKQLPDDKKQDYPFLRSSIYSYLYSGCSHLALEHIKEIEASHP
LIILPNKEIEEEEEEEEVKVVEEEKKPSSSSYDDLGLDFGGSSSYFNSSSKNSGLDDLDF
GGSSSYFNAPKSSGLDDLDFGGGASSTTTSNNNSNYFDMGLDFGTTTTKKIDDLGLDFGD
TQSSTKNDLRLTSEIKNDGKEFKDDTKKKNTLEREKVSIYPIVDLELKAKLVLQVLVNNL
VNFKESNQWNENVERFDEMLYLMTDKYELEKNIIIDRLIVFCAHRQYYKQIIHLYNLLGA
SKNSANDFMDQACHSILKSIYRIDDYPQTKQQTQHLLKLSIELYSCIPDLKNPSLIVMSI
YMILFLASWGNSRFDILLSILYQETPAAAPPQQPKKNTFNNLQFNPVVSNQPPPIGSNVD
VLLKAIQQLYKSGEGSTFVTYQDEQLQSHLDSDEEDNDEDKLLKYQKNIDTINCIQKIFE
LFCLTRFRKVYDAVIKDLTYHHVFDLMHQRLHFWLVSIQSKILSPPRSIYDTFYRKPRAQ
ASTNLLDLVKTFPVFHTQQRVELWQHFIKENDNIDLLTNTILPSEDSTYMPSSSRKIKFA
EEAIELYKDGDLLQSFCVDASPPEGTDIQVVAVATTRGIREIDLKHSPQQQSQHHHQDNQ
SSSDDFDIDSAVATSGEFLSPTQSGRKLRISAKSVSSLNFKGGKQNVFKSAISSLNASKQ
VDHNIIVQCLESHPSSSYYLSGGIDGSVCLWQFGIPEALAAYQLPTRPRVVRCRFNQSGS
KFGACDMSGNLMLWQFAAQEDTLRPFYSLQAHSKQTLDFTFINSGSLLATAGISTNSKKD
VCLWDVLLPPHKSLVASYTDQESGASSISYSPKHQLLVVGGKKGSISYYDIRTNKLLDNF
KGHTLNTKTLAIDPSEDFVATGSSDGNIKTWSLPSMNCISTFEDSHRKQTFVRPTGVFKS
PVSTYGVIQVRMANNHIYSCGADGRLTKHEREFDHGAIDNQIIREDSHENFLLP
NT seq
8085 nt
NT seq
+upstream
nt +downstream
nt
atgacagagaatattacattgggaggaggaagtggtagtacaatgtttccaaatcaaata
gtgacaggtgcagccaacccaaaccccaatacatttgcatgcactcatttcaatgatgat
acctactttgcatactcttcgtcgagaaatgtatatgtactcaaaggtggttcactcaga
gtcattcaagtactaacaggacacaaaacagatgtcacttcaatcgcatggctaaattat
cattcaaagttactcactgccagttcaacagagatttttgtttatgatattgtcaaaaat
cctcaacaaccagttcaaccttcatcatcatcatcatctgagacaaacaaagataataaa
cttgaatgggaaagaattatggtaataccaaatccatttgaaatcaatacaatgtgttgg
ttaaattcgaattcatttgtggttggaggagagtatttggcactttggaagttggatttt
gatcagatacacaagcaatatgcattgactaaacaacagatgcaaaaggaacaagataac
ccacagagtgctgctgctgccagtctgggactgcacacgagctcgaccgcgatgttggga
tcggcatcgtcgtatcagattagcaacaaggccaacattgaaagaatgggtctgcgtgaa
caaaagatatttagaaagcaggcgaccattgtgtggagaagcgagtgttcgcagccagta
catcacatctcgtgttcacccgatggatcgttgtttgcaacggctggaaagtgcgatcga
atgttaaaggtgtggtacaagcagcccaaagtagcacagacacccgatcaagacgacagc
aacgcttccaccacctctacaacatcggctgcaacgtcgaccaaaacaaagggttacttt
aaagaccatttcaatcaactcacgagcaaagaaccaaaattcaaattcacaacacaaaaa
caacaggaaaaggatgacgagtttaaccagaacctcgccaaacaacaacaacaacagaaa
cttagggcacagcaaaaacagaagcgtttcgagtatgaatcctacgggttcatctatcta
ccacatccacgtgccatttcttggatctcgtggagaatgagagattcttcacaccacaac
atactcttgaccaactgtaaagacggtgtcgttcgtctttggcaacaatcactccaatcg
aatcgtcttcaattcaatgtatctaatattattcatgctggaactgaatcggttgattgg
atcaattgttattcccctttatttttacaacaacatcatatttatcaacaacaacaacag
caacaatcaggttcatcttcatcatcttcatctcaaccacaatcatcaacttcatctcaa
ccatcaacttcatcaaaacaaactactactgctactactactgatggattagaaattaga
ccagatttattgacaaacttaaagaatcctattttattaagattaaaagaaggacattta
actagaagtaaatcaatagttgattggattttaggtgtaaagcaagatggtacactgatc
atgtggaagttaaagactgatgattcaacgtcgagacagacatcatccatatcgatatgg
atcaattcaccacagattctatcaccacaagaggtgggtcccaatagaatcattgccctt
tatcaaccactctctatcagtgacaacacaccaacatcgatcaccatttgtgtaaattcc
tttaatggtgccatttcatgtcgcaaattctacattcaaaaccaaaaccaaacacaaata
tcaaatacttcaccaccaagtcgttgttatggtcacaagagttccattcgttcaatcaac
gtttcaccagcttcccattatctctctacagtcgatcgtcaaaataatatcattctttgg
caaactaccgatggtaccaaaattcaagctccctattatctagtcgacattggatctatt
ggtacaagtcattcaattacttggtcgtctgaaaataatttttgtttttctgcaaacaaa
gatggaatattggtttatcatattgatccacatgataataataaaccattaaagttacca
attggaattatcgatcaatcatgtatacaaaactctgatcatgaagagttttatgaagag
atacatgtggttgattgtcaaccccaactatacagaggtatcagcggaaagaaaaatgca
ccaaacttttcatttttcattattggtataaacaactatggtgataaactaacgatttgg
ggtgttaccgttgactataaccaaaatggtccacaaacaaccgtttcaacatcttcaacc
acctctaattcaccattttcactttcctctaaattgttggcaaccaaaaccttttcaagt
gaacaaaagattacttgtatttgtccaactccaaaaggtgttgctgataaaatgtcaacc
attcaattatttaaacaacaagaaaatcaaaatgaaaatgaaaatgaaaaagagaatggt
catgatgatgataatagttcatcaacttcaacaatcgaggaatatgaagatattccatca
catccaatttgtgttactggtagtatggatggaattattacagtatggtcattatcagct
tttgatacaccacaagctgacaatcaatcggcaacaggtgatgatgtctatgatgaatta
ttcaaggaaaaggaagatcatgagaaatctgaagttaaaaatcaagacaatgatgacaat
gatgacaaagatcatcatcaaggaccatattggaagataacagagttgtgtcatcatgca
gcataccaacaaccggttgaatcagtatcaccagcttactttggaagatttgctagtact
ccttcaatgagtgcattccacaactatgtcattaatccagtcattcacatttgggaactg
gaatcccatacaccaaagttgcaattggaggatactatcaagttttatagcgacgaagag
tttgaacaacaacaacagttggtgtctctcaacattccaacctttgcaagtgaagccaac
ttttcctaccaacaatcgtacgatccgtttgaacaccagtcgtcaaactctaacttttcc
ataaagagtggatgtaattttagttttgctacgtttgccgacggtacagtgtcgcttgca
actggctttaaaaacactatccgtgtgctcagaaaaccaattgacagaagtatcggatcg
tacaatcgttcatggatggaaacacacagatacaacgatctatcgtctcaatgtgtgtcg
atagtgtggggcaaggacagagaattgtttgttgcaagtggtaaccaaatattggtcttt
tcaaagtggatgaaaccaaccgaagcattcctttcaatgtatgaaggtatctatccaagt
atcgatactgtctaccaccaacactctatcctctcgagaccactgccatactaccatcca
aagttgttgacagagtacatgatggctggcaagtttgaaaaggttgaaaacattttaatg
tttatctctaggtttttaatctctagattcccattcctcttgactgatccaaatccagtt
caacaacaatcaatctatgatgatgatgacagtgacgaagaaaaggattatcatcaacaa
ccaaaaccatcttcttcctcttctacttcagcagctgatcaagttgatctaagtaaacct
gtatttataccaactgtagatattgaagatatgttattggatgaaagcgatagaccaata
accgatgataatggcatggaccatgaaaccaacaatggattcaaagataaaagacaggaa
gaagaacaagaagagttggtattggacaagtataataacaacctgtcaacatcaaatgac
gacttgtttaatcatgcaaatcaagatgaaaaatcattcaccaagaagcaagcagccaaa
ctcaacgaaattctatcaaatgtcaggttggccggtctcaacagcgccgaacagatccaa
ttgttggcattgaccgacacgtacggtcagattggagagatgagaggagggttggatgag
aatggccaaagattcctattgaatgtcaagatttaccaattcctcaaacgttcaatgaat
ccaacagaacgacccatctcactgagtgcagttgacattttatgggctcttcactctgaa
tgtcaagaaacattgcttcaaaactgtttcccaactgatccactctgggaagactatcgt
caacttggtgcaggtctttggatcaagaatccaatcacactcaaaaacacatttgaaaag
cttgccaagaccacctacactgccaacaaggatccaagcgagagtgcactctactatatt
gcacttggtaaaaagggtgctctcgtcgctctacacagagcacacaaagagaccaaacaa
gtcgatttcctccttcaagattttactcaacagaaatggatcaatctcgctgccaagagt
gcctatctactccaaagtaagcatagatatgatttggctgcatccatgtttttgctggcc
ggtgatctcaagcaagccaccaacctcatcctccaatccaagggtgacttccaattggcc
tatgcgattagcagattgtatgagggtgagaatggaccaacctcgcgtatgattctcgag
gagcatgttatcccccatgccaaaaagacctatgatagatcgctgctctctgtatgtcaa
tggttgctcaaaaactatgaagattcgctcaagattcttttgccttcgaccgagattaat
gaagcttcgaaaaagctagactatgaccaagtacaacacctgtctgcttacaactctccc
accaatacctctggaaacaactcaccacttccaaccatgggtggaggatttggtagaatc
ccatcagtcatttctcttagcaactatgcaatgtcatcttcaccgctcttgtctagaaat
caacaaactcaaaaatcgactacaaccaactcgattgcatcacaactacgtacctctgaa
atgggtccatcggcactatactttttcagataccttcgtgctcacattctattaaaacaa
ttgccagacgacaagaaacaagattatccattcctcagatcaagtatctattcctatctt
tatagtggttgttctcatcttgctcttgaacatatcaaagaaattgaagcttcacatcct
ttaattattctaccaaacaaagaaattgaagaggaagaagaggaagaagaagtcaaagtg
gttgaagaagaaaagaaaccatcatcatcatcatatgatgatttgggtttagattttggt
ggttcatcatcttatttcaatagtagttcaaagaatagtggattggatgatttggatttt
ggtggttcatcatcttatttcaatgcaccaaagagtagtggattagatgatttagacttt
ggaggaggagcaagtagtactactacttcaaacaataatagtaattactttgatatggga
ttagattttggtacaacaacaaccaaaaaaatagatgatttaggattagattttggtgat
acccagtcctctacaaagaatgatctaagattaacctctgaaattaaaaatgatggaaag
gaattcaaagatgacaccaaaaagaaaaatacattggaaagagaaaaggtttcaatttat
ccaattgttgatttggaattaaaagctaaattggttttacaagttttagtaaataacctt
gtaaactttaaagaatcaaatcaatggaatgaaaatgttgaaagatttgatgaaatgttg
tatttaatgacagataaatatgaattggaaaagaatattatcattgatcgattaattgta
ttttgtgcacacagacaatactataaacaaatcattcatctctacaatcttttgggtgca
tccaaaaactctgccaatgattttatggatcaagcttgtcatagtattctaaagtctatc
tatcgtatcgatgactatcctcaaaccaaacaacaaactcaacatcttttgaaattatca
attgaattgtatagttgtattcctgatcttaaaaatccttcactcatcgtaatgtcaatt
tatatgatattatttttggcaagttggggtaattctagatttgatattcttttatcaatt
ctttatcaagaaacaccggctgctgcaccacctcaacaaccaaaaaagaatacttttaat
aatctacaattcaatccagtcgtttcaaatcaacctccacccattggaagtaatgtagat
gtgctcttgaaagcaattcaacaattatacaagtctggtgaaggaagtacctttgtcacc
tatcaagatgaacaacttcaatctcatcttgatagtgatgaagaagataatgatgaagat
aaattacttaaatatcaaaaaaatattgatacaattaattgtatacaaaaaatatttgaa
ttattttgtttaactagatttagaaaagtatatgatgcagtgattaaagatttaacctat
caccatgtatttgatttaatgcatcaaagattacatttctggttggtatcgattcaatcc
aagattctttcaccacctcgaagcatctatgacacgttttaccgcaaaccaagagcacaa
gcatcgaccaatctcttggatcttgtaaagacattcccagtgttccatacacaacaacgt
gtcgaattgtggcaacactttatcaaggagaatgataatatcgatctccttaccaatacc
attctaccctctgaagacagcacctacatgccatcatcatcgagaaagataaagtttgcc
gaagaggccattgaattgtataaagatggtgatctccttcaatcgttttgtgtcgatgcc
tctcctccagaaggcacagatattcaagtggttgctgttgccactacaagaggtatcaga
gaaatcgatctcaagcatagtccacaacaacaatcacaacatcatcatcaagacaatcaa
tcaagtagtgatgattttgatattgacagtgctgttgcaacgtctggtgaattcctttca
ccaactcagtctggtagaaaattacgtatctctgccaaatcagtttcatcactcaacttt
aagggtggtaaacaaaatgtttttaaatctgctatttcttctttaaatgcatcaaaacaa
gtagatcataatataattgtacaatgtttagaatcacatccaagttcatcatattattta
tcaggtggtattgatggatcagtatgtttatggcaatttggtataccagaggcattggca
gcttaccaacttccaactcgtccaagagtggtaagatgtagattcaatcagagtggttca
aagtttggtgcatgtgacatgtctggtaatttgatgttgtggcaatttgcagctcaagaa
gatacacttagaccattctattcgttgcaagctcattctaaacaaactttggatttcaca
tttatcaactctggcagtttattggctactgccggtatcagtaccaatagtaaaaaggat
gtttgtctttgggatgtattactacctccacataaatctttggttgcaagttataccgat
caagaaagtggtgcctcttccatttcttattcaccaaaacatcaattattagttgttggt
ggtaaaaagggttcaatttcatattatgatattcgtacaaataagttattggataatttc
aagggacatacattaaataccaagacattggcgatagacccatcagaagattttgttgca
actggtagcagcgatggtaatatcaagacgtggtcactaccatcaatgaattgtatctcc
acttttgaagattcacatagaaagcaaacatttgttcgaccaacaggtgttttcaagagt
ccagttagcacatatggtgtcatccaagttagaatggccaataaccatatttattcctgt
ggtgcagatggacgtttaacaaaacatgaaagagaatttgaccacggagccatagataat
caaatcattagagaggattcgcatgaaaatttcttgcttccttga
DBGET
integrated database retrieval system
