Cavenderia fasciculata (cellular slime mold): DFA_04259
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Entry
DFA_04259 CDS
T02668
Symbol
vps36
Name
(RefSeq) vacuolar protein sorting 36
KO
K12190
ESCRT-II complex subunit VPS36
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
DFA_04259 (vps36)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfa04131
]
DFA_04259 (vps36)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfa04147
]
DFA_04259 (vps36)
Membrane trafficking [BR:
dfa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
DFA_04259 (vps36)
Exosome [BR:
dfa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DFA_04259 (vps36)
Exosomal proteins of colorectal cancer cells
DFA_04259 (vps36)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
RPW8
MAML1_3_TAD2
Fib_alpha
DUF2489
Motif
Other DBs
NCBI-GeneID:
14874534
NCBI-ProteinID:
XP_004359992
UniProt:
F4PP28
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MESINHSIQIVQQNPVLFDNEDVVSQMTIDNVSIYYGDALSPYQKGVIILTSLRVIWVQT
SNNLPDHQIASCALHHDSIATIAPITTGFLGIGSSPKISITCRSGKELRLSFHAGKRDEF
CRIYKQVLLERQTIQRQLQQQQEQLKQQQQTTTTTPTTTFDQPQQITTNTNRQTFDTSNA
GISGLIKQMNKRTEETDKVLSEAFTDLNALMEKAKDMVTLSEKLKTAMDKQLKKEGDPSY
SAEEDEFRSFLLHMGINTPVTKKTAKSHYHTELSKQLSDWMLEKQILSKQGGGRQLNSGM
IPLADLYCIFNRARGIELISPDDLYRACLLFEQLNLPFRIRKFDSGVIVVQSKDENDEQV
AKEIIEIIRENGGSITPFHLSTIQQISLNLSKEKLLACERLERLCRDETIQGISFYENFF
IDCKQLQNSPPLVAT
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggagtctataaatcattctatacaaatagttcaacagaatcctgtgttgtttgacaat
gaagatgtagtatctcaaatgactatagataatgtatcaatctactatggtgatgcattg
tctccctatcaaaagggtgtaatcatactcacttcacttagagttatttgggttcaaaca
tcaaacaacctacctgatcatcaaatagcttcatgtgctctacatcatgattcaattgct
actattgctcctattacaactggattccttggaataggttctagtccaaagatatcgata
acttgcagaagtggaaaggagcttagattatcttttcatgctggtaaaagagatgaattt
tgtagaatctataaacaagtattattagagagacaaacaattcaaagacaattacaacaa
caacaagaacagctaaaacaacaacaacaaacaacaacaacaacacctactacaacattt
gatcaacctcaacaaataacaacaaatactaatagacaaacatttgatacatcaaatgca
ggaatcagtggattaattaaacaaatgaacaaaagaacagaagagacagacaaggtttta
agtgaagcattcacagatttaaatgcattgatggaaaaggccaaggatatggttacattg
tctgagaaattaaagacagcaatggataaacaacttaaaaaggaaggagatcccagttac
tctgccgaagaagatgaatttagatcattccttcttcacatgggtatcaatactccagtg
acaaagaaaacggcaaaatcacattatcacactgaattatcgaaacaattgtccgactgg
atgctagaaaagcaaatactatcaaaacaaggaggtggtagacaactaaacagtggaatg
attccattggctgatttatattgtatttttaatagagcaagaggaattgaattaatatca
ccagatgatttgtatagagcatgtttattatttgaacaattaaacctaccatttagaatt
agaaagtttgacagtggagtgattgtcgttcaatcaaaggatgaaaacgatgaacaagtt
gccaaagaaataatagagatcattagagagaatggaggttccatcactccatttcatctt
tcaactattcaacaaatttctttaaatctatcaaaagaaaaattattggcatgtgagaga
ttagaaagattgtgtcgtgatgaaaccattcaaggcatatcgttttatgaaaattttttt
attgattgtaaacaactacaaaacagtccacctcttgttgcaacataa
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