Cavenderia fasciculata (cellular slime mold): DFA_04560
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Entry
DFA_04560 CDS
T02668
Symbol
copA
Name
(RefSeq) WD40 repeat-containing protein
KO
K05236
coatomer subunit alpha
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfa04131
]
DFA_04560 (copA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dfa04147
]
DFA_04560 (copA)
Membrane trafficking [BR:
dfa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
DFA_04560 (copA)
Exosome [BR:
dfa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
DFA_04560 (copA)
Exosomal proteins of bladder cancer cells
DFA_04560 (copA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
TPR_COPA_B
WD40_RFWD3
Beta-prop_SCAP
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SPT8
Beta-prop_DCAF4
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
zf-Tbcl_FmdE
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
14874506
NCBI-ProteinID:
XP_004360289
UniProt:
F4PPX5
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MLYKYETKSNRVKGLSFHPTRPWILASLHSGSIHLYDYRIKTLLEKFEEHDGPVRGVNFH
MTQPLFVSGGDDYKIKVWNYKQRRCLFTLKGHKDYIRTVEFHREAPWILSASDDQIIRIW
NWQSRTCIAELNGHNHYVMSAQFHPKDDLIVSASLDQTIRIWDISGLKKKTITIKPYRDN
DSLRLQDEIFGTDVIVKLSLEGHDRGVNWAAFHPTQPVIVSASDDHHVKLWRMNDPIVDT
LRGHFNNVSCALFHPRQDLVLSDSEDKTIRVWDMAKKTTIQTIRREHDRFWTLAAHPNAN
LFAAGHDSGMIVFKLERERPTFVPNGSDGVFYLKRKHFNSFDFSTGRSVVLFNITKIPSN
NGTQVMSYNASERSILVSSDADGGSYHLYKIPTRDISQVDSKKGNGVAAIFVGSNRFAVL
DKQNNVIIKGLDNEEVKRFQPAQTVEWLFPAPVGHVLVLTDEKMMLFDIQQKTAVAELFT
PSIRYVIWSKDYNYVALLARDSLILATRRLEQICIVSESVLPKSGAWDENGVFIYTTSNH
LKYLLPNGDNGTIKTLDTTIYLTGVKGSRVFAIDRELKNRHIEIDRSEYLLKLALFQKRY
ADVIKILRESKLVGKSIIAYLQRKGYPEVVHFVKDDRTRFNLALECGNLDIALQSAKILD
DKQCWSRLAEVALRQGNQQIVEMAYSRTGELDRLSFLYLLVGNTSMLKKMITYDSTDIMS
RFQYSLYLGDIDERIKVLQEAGLLSLAYITASINGLREKADQLASQITADGKTQLPSVPS
NPFKLLPPQPVYIAPEVNWPLLNIAKSSAELGGQDRKFAMDNSGAVDDDDEIDNSGPKIG
GGGWGDDDDIMAEDNNKNKGDEQQDSNGGGWDDDIVIEGGKGDGSGWDDDIDIGTSVSKQ
DISSMFVPPQPGSSFGQIWSRNTNFAVDHIAAGSFETAMNMLNQQVGIVNFEPVRSFFIN
IHMGARVALSSQAALQPIIEPLQRKHGQPYVSYNIQHLLERLRTLAYKSTTEGKFTDAIL
HFTYILHCAIFTTVESKQEFNEIKELIGVCREYITGLRIETQRKELPPTQLTRVAELAAY
FTHCNLEPTHLVLALRSAMNNAYKLKHFDLSASFARRLLDLSPPGDLSTQAKKVIAFSQQ
NQTDPSITIAYDERNPFVIDSLSMTPIYRGSPLVRCPLCSSSYQPQHKGKLCNICQLAEI
GKDTTGLQLILLQQK
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atgttatataaatatgaaacaaaaagtaatagagtaaaaggtctaagttttcatccaact
agaccttggatcttggcatcattacattcaggatcgattcatttatacgattacagaatc
aagactttattggaaaagtttgaagaacatgatggacctgtaagaggagttaactttcat
atgacacaaccattatttgtgtctggtggagatgattacaagattaaagtatggaattac
aaacagagaagatgtttgtttacgttaaagggacacaaggactatattagaacagtcgag
ttccacagagaggcaccatggatcttgtcggcttcggacgatcagatcattcgtatttgg
aactggcagtctcgtacatgcattgccgagctcaacggacacaaccactatgtcatgtcg
gctcagttccatcccaaggacgacttgatcgtgtcggcatcgctcgatcagaccatccgt
atctgggatatctctggtctcaagaaaaagactatcaccatcaaaccgtaccgtgacaat
gacagtctacgtctccaagacgagatctttggcactgatgtcattgtcaagttatcactc
gagggtcatgaccgtggtgtcaattgggcagctttccatccaacccaacccgtcattgtg
tcggcatcggacgaccaccatgtcaagttgtggcgtatgaacgatccgatcgtcgacacg
ctccgtggtcatttcaataatgtcagttgcgcactcttccatcctcgtcaagaccttgtc
ttgtccgactcggaagacaagactatccgtgtctgggatatggccaaaaagacgaccatc
cagaccatccgtcgtgaacacgaccgtttctggacacttgctgcacaccccaacgccaac
ttgtttgctgccggtcatgacagcggtatgatcgtcttcaagttggagcgtgagcgtccc
acctttgtccccaacggatccgacggtgttttctacctcaagagaaagcatttcaactct
tttgacttttcaactggtcgttctgtagttctctttaacattactaaaatcccttcaaat
aatggtactcaagtaatgtcttacaatgcttctgaaagatctatccttgtttcttctgac
gctgatggaggtagttatcatttatataaaataccaacaagagatattagtcaagttgat
tcaaagaagggtaatggagtagcagccatttttgtaggtagcaatagatttgccgttttg
gataaacaaaacaacgttattatcaagggattggacaatgaggaagtcaagagattccaa
ccggctcaaactgtcgaatggttgttcccagcaccagttggccatgtgttggtgttgacc
gacgagaagatgatgttgtttgacatccaacaaaagacagcggttgccgagttgtttact
ccatcgattcgctatgtcatctggtccaaggactacaactatgttgccttgttggcacgt
gacagcttgatccttgccaccagacgtttggagcagatctgtattgtcagcgagtctgtc
ttgcccaagagcggtgcgtgggacgagaatggtgtctttatctacaccacctctaaccat
ctcaagtatctcttgccaaacggtgacaatggtaccatcaagacactcgacaccaccatc
tacctcaccggtgtcaaggggtcgcgtgtgtttgccattgaccgtgagctcaaaaacaga
cacatcgagattgaccgttccgagtacttgctcaagcttgcactcttccaaaagcgatat
gcagacgtcatcaagattttgcgtgagagcaagttggttggcaagtcgatcattgcctac
ttgcaacgcaaggggtatcccgaagtcgtccactttgtcaaggacgaccgtactcgtttc
aatttagcactcgagtgtggaaacctcgacattgcattgcagtcggccaagatactcgac
gacaagcagtgttggagcagattggccgaagtcgcactgagacaaggtaaccagcagatt
gtcgagatggcatactcgcgtactggcgagctcgaccgtttgtcgttcctctacttgttg
gttggtaacacatcgatgcttaaaaagatgatcacctacgactcgaccgatattatgagt
cgtttccaatactcgctctatctcggcgacattgacgaacgtatcaaggtgctccaagaa
gccggtctcctcagcttggcctacatcaccgcttcgatcaacggactgcgtgaaaaggcc
gatcaactcgccagccagatcactgctgacggcaagacacaactcccctctgtcccatcc
aacccattcaagctactcccccctcaacccgtctacattgctcccgaagtcaactggccg
cttctcaacattgccaagagctctgccgagctaggtggtcaagaccgtaagtttgccatg
gacaactctggtgcagtcgatgatgatgatgaaattgacaactctggtcccaagattgga
ggtggtggttggggtgacgatgacgacatcatggccgaagacaacaacaaaaacaaagga
gacgaacaacaagacagtaatggtggaggttgggatgacgacattgtcattgaaggtgga
aagggtgatggatcaggttgggatgatgatattgacattggtacttctgtctctaaacaa
gacatttctagtatgtttgtcccaccacaacccggttcgtcatttggacaaatttggtca
cgtaacaccaactttgcagttgaccatattgccgccggctcattcgagactgccatgaac
atgttgaatcaacaggttggtatcgtcaactttgaacccgtccgttcattctttatcaac
attcatatgggtgcacgtgtggctctctcgtcacaagctgccctccaacccatcattgaa
ccactccaaagaaagcacggtcagccatatgtatcatacaacatccaacacctcttggaa
cgtctccgcacactcgcctacaagtcgaccaccgagggtaagtttaccgacgctatcctc
cactttacctatatcctccactgcgccatctttaccactgtcgagtccaaacaagagttt
aacgagatcaaagagttgattggtgtgtgtcgtgaatacattactggtttgcgtatcgaa
acacagagaaaggagttgccacccacccaattgacccgtgttgctgaattggctgcctac
tttactcactgtaatctcgaacctactcatcttgtgttggcacttcgttcggccatgaac
aatgcctacaaactcaaacactttgacttgtcggcttcgtttgctcgtcgtctcttggat
ctctcaccaccaggcgatctcagtactcaagccaaaaaggtgattgccttttcccaacaa
aaccaaaccgacccttccatcactatcgcctatgatgaaagaaatccatttgtcattgac
tcgctctccatgaccccaatctacagaggttctcctttggttcgttgtccactatgctct
tcatcctaccaacctcaacacaagggtaaactctgcaatatctgtcaattggctgaaatt
ggtaaagataccactggtttacaattaattcttttacaacaaaaataa
DBGET
integrated database retrieval system
