Cavenderia fasciculata (cellular slime mold): DFA_04652
Help
Entry
DFA_04652 CDS
T02668
Symbol
ddx20
Name
(RefSeq) putative RNA helicase
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_04652 (ddx20)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DFA_04652 (ddx20)
Spliceosome [BR:
dfa03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
DFA_04652 (ddx20)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
14874800
NCBI-ProteinID:
XP_004360375
UniProt:
F4PQ61
LinkDB
All DBs
Position
Unknown
AA seq
850 aa
AA seq
DB search
MDIKHHQNNDHKNNPSNDDSDITLVDNEEEDPQPSSLSSLSSTTTTTTTTTTTNTSSSTP
QTNRNRTKDVMIEKDIGFSELNLPSVLVEALKSCGFEKPSPVQVQAIPIGVSGVDMVAQA
KSGTGKTVVFGSIAIERVLRHCTQPTASTLSKKQLLDMDDDSYAEAVSGVPRRTLVLMLA
PTREIAIQIASVVGEIAKHAGKRLHVEAFVGGNASTTQEDEIKLGGAQVVVGTPGRIRSL
IEARRLRTDDIELFIMDEADKLLDAAFSKDFNWIFTSLPKKRQIAAFSATFPTALLNMVE
RYMSNPVHVQMCKGEEGVSLEGIKQYYQIIKDTNNTTNNTNNTSSTSIPISTIEYHTFRA
KVNSLLILLEQVSFYQAVVFCNNRVRAEELCKLLCKEGWPTRYIAGSMEQIERMAVMKEL
QAFKLRILVSTDLISRGIDIERVNLVVNMEVPVAMDFETYFHRIGRTGRFGSYGVSITYV
SGDREMQFISQLQSRFNSKIEERQENDEIPEHYYAYQLASEKESNQLEQLKAKQENNLKS
IQEKQLKKLSNKSSQSKKPNSNSNRSRNQVDIDQEEEEEEDEILEDLEEEQEDDYDEQVN
YDEDEEEGEEENGNEQQNFRYQPAYYYPPPRDDYHQYNYYSYQPPPPPPHIPQNQHVNQH
PIPPHNHNQHIPHGIQQQQNLHQPVALPHHNHHHHHHQPPIPMMHEPNHPILNIPHPHHL
EPHPVPPPPPPHIPHGIQQQQQQNLHQHPIPPPPPPPHPLLLTHPILNVPPHQHHHHHQP
PPHPHLPVEYQNHHCNCSFCPSNVYTYNMNNDENNNNNNNNNNIYQHVNPSANSNSFNYL
HNHNYYMYRS
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atggatataaaacatcatcaaaacaatgatcataaaaataatccttcaaatgatgatagt
gatataactttagttgataatgaagaagaagatccacaaccttcatcattatcatcatta
tcatcaaccaccacaacaactacaactacaactactacaaatacatcttcatctactcct
cagactaatagaaatagaacaaaagatgtaatgatagaaaaagatataggatttagtgaa
ttaaatttaccaagtgtgttggtagaagcattaaagagttgtggattcgagaaaccgtca
cctgttcaagtacaggctattccaattggtgtgtctggtgtggatatggttgcacaggca
aagagtggcactggaaagacggtggtgtttggttcgattgctatcgagcgtgtgttgaga
cactgcactcaacctactgcatcgacactatctaaaaagcagttgttggatatggacgat
gacagttacgccgaggcagtgtcaggtgtaccacgacgaacactcgttctcatgttggca
ccgaccagagagattgccatccagattgcatcggtcgttggagagattgccaagcatgca
ggcaagagacttcatgtcgaagcgtttgtcggaggcaatgcatcgaccacccaggaagac
gagattaaattgggcggtgctcaggtggtcgtcggaacacccggtcgcatccgatcactc
attgaagcacgtagactacgaaccgacgacattgaactctttatcatggacgaagccgac
aaactactcgatgcagccttttccaaagatttcaattggatctttacctcgttgcccaaa
aagagacaaatcgctgccttttctgccacctttccaactgctctccttaatatggtcgag
cgttacatgtctaaccctgttcacgttcaaatgtgtaaaggtgaagaaggtgtatctctt
gaaggtattaaacaatattatcaaattatcaaagatacaaataatacaacaaataataca
aataatacttcatctacttcgataccaatatcaacaattgaatatcatacatttagagcc
aaagtaaatagtttattgatattgttggaacaagtatcattttatcaagctgttgtattt
tgtaataatcgtgtacgtgcagaagagttgtgtaaactattgtgcaaagagggttggcca
acacgttatattgcaggatcaatggaacaaattgaaagaatggcggtcatgaaggaacta
caagcattcaaactacgtatacttgtatcgaccgatttaattagtcgtggtatcgatatt
gaacgtgtcaacttggttgtcaatatggaggtaccagtggctatggactttgaaacctat
ttccatagaataggacgtactggaagattcggtagctatggtgttagtatcacctatgtg
tcaggtgaccgagaaatgcaatttatcagccaactacaatctagattcaattcaaagatt
gaagaacgtcaagaaaatgatgaaattccagaacactactatgcctatcaattggcaagt
gaaaaggaatccaatcaactagaacaacttaaagccaaacaagaaaataatctaaaatca
attcaagaaaaacaattaaaaaaattatcaaacaaatcatcacaatcaaagaaaccaaat
tcaaatagtaatcgtagtagaaatcaggttgatattgatcaagaagaagaagaagaagaa
gatgaaattttagaagatttagaagaagaacaagaagatgattatgatgaacaagtaaat
tatgatgaagatgaagaagaaggagaagaagaaaatggtaatgaacaacaaaatttccga
taccaaccagcttattattatccacctccacgtgatgattatcatcaatacaattattat
tcatatcaacctccacctccacctccacatattccacaaaatcaacatgtcaatcaacat
cccattcctcctcataatcacaatcaacatataccacatggtatacaacaacaacaaaac
ctacatcaaccggttgctcttccacatcacaatcatcatcatcaccatcatcaaccacca
attcctatgatgcatgaacccaatcatccaattttaaatatccctcatccacaccatcta
gaacctcatcctgttccacctccacctcctccacatataccacatggtatacaacaacaa
caacaacaaaacctacatcaacatcctattcctcctccgcctccacctcctcatccactt
cttctaacccacccaattttaaatgttcctcctcatcaacatcaccatcatcatcaacca
ccaccacatccacatctacctgttgaatatcaaaatcatcattgtaattgttcattctgt
ccatccaatgtttacacttacaacatgaacaatgatgaaaataataataataataataac
aacaataatatatatcaacatgttaatccatcagcaaattccaatagttttaattatctt
cacaaccataattattatatgtatcgatcataa
DBGET
integrated database retrieval system
