Cavenderia fasciculata (cellular slime mold): DFA_05268
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Entry
DFA_05268 CDS
T02668
Symbol
thoc2
Name
(RefSeq) putative THO2 protein
KO
K12879
THO complex subunit 2
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03013
Nucleocytoplasmic transport
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_05268 (thoc2)
09122 Translation
03013 Nucleocytoplasmic transport
DFA_05268 (thoc2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_05268 (thoc2)
03041 Spliceosome [BR:
dfa03041
]
DFA_05268 (thoc2)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DFA_05268 (thoc2)
Spliceosome [BR:
dfa03041
]
Complex C
Other components
EJC/TREX
DFA_05268 (thoc2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DFA_05268 (thoc2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
Thoc2
Arm
Motif
Other DBs
NCBI-GeneID:
14875432
NCBI-ProteinID:
XP_004360989
UniProt:
F4PNT5
LinkDB
All DBs
Position
Unknown
AA seq
1181 aa
AA seq
DB search
MPYSTRYKFYGEWKSTYTKYVPSIEMKAQVNSDTKKVLRRLSKENVKQLGKTIGRFSHNN
PLIVLESLLFSVESYDNLVQPLVDSIKYLSPLSFDILSYQLLERFTLSNRSKLKPDGTNI
SSWFQGLSSFSGFLYRKYPNTELEGLLQYMVNQLVDNNSLDMIILKELISKMGGVEVIEE
PPDHQIEAQAGGELLKTESSTMNVSKIKKAVTKLRDTLLNSKLAFPLIILIAKQRLNIVF
NNQQSGNVRMMSDLYDKCQETLLQFTEFLSTNVSNNDYSGLFGNFSQLVTTFYLEPETSF
HIYRPIISAAFHDTSNSSTSTSTLSFEQLMNQCKLIHPPTIWNSLSLELYTLFWSLSLYD
IHVPKQSYEQEIQKLKQANTEIDHAIQSEKDQTEKNAKRRKDRERNTQTIDKLYKEMEAQ
IANNQKVMERFMSLNQKFFSEGNTKSTLKFIQCCIYPRAIFTPIDAIYCSKFVHLLHTTN
TPHFTPLLYYYNVTGLISFSITSYTENESVRFGRFLKESISILNRWRSSESIFDKECKPF
KGFIIDTSSNIVKYEDFFTATAKWHSQICDSFITCLQSSDYTVTKNALLALTKLIDVFPI
QVQSYQSLEQAVSKIRSDREELKILATRYHSLLEKNKSKIVEIYSKNQSKKKLEDKKDDK
KVDEKKVEEKKSEEKKEEKKLEEKKSEEKKSSSTTNLKSSNKSNNDKMDIDNKSKERERE
REREREREREKEIRERELREKEMKEKEIREQQRERQERDRERVEKEKEREKERERQEREK
ERERQERDREREKEREQQLSRERDREREQQLSRERDRERITEKEREREKDREVERDRERE
IQLREKEKEREKQDREKEREKERELQIIKEREAAREARDRENNRENNRSSQSDRKDLRET
LRDNRSRDNDNNRDRDNNHRDNNNNRDSNRNDRDKSPPYIEDRKRRKDEIQKPDERRDGN
NNNNNNSGNNNGGDKTPRSGGEKMTQLREKLKESQKEKDKEKEKEKDPHHPIPIPTNSSP
SLTASSSTASPTSTPPLNNNNNSTPPKLDQQSQMDNQDDGKKKRLNRNRQQSPPISFSSP
PLNNNNSIASPPPPLRSGGNNYSNHPRDQRDLPLPPLPQQQQQRGGDRDNFRDSRDQRDR
DFREREQQREREQYEREQQREREMRQQKDRDARERTIDRRR
NT seq
3546 nt
NT seq
+upstream
nt +downstream
nt
atgccctattctacaagatataaattctatggtgaatggaaatcaacctataccaaatat
gttccaagtattgaaatgaaagctcaagtcaatagtgatacgaaaaaagtacttcgtcgt
ctttcaaaggaaaatgttaaacaacttggtaaaactattggtagatttagtcataataat
cccctaatagttttggaatctttattattttcggtagaatcttatgataatcttgttcaa
cctcttgttgattctattaaatatttatctcctttatcttttgatattttaagttatcaa
ttattagaaagatttacattatcaaatagatcaaaattaaaaccagatggaacaaatatt
agttcatggtttcaaggattgtcatcattttctggatttttatatagaaaatatccaaat
acagaattggaaggattacttcaatacatggtcaatcaattggtagataataattcattg
gatatgattatattaaaggaattgatatcaaagatgggaggtgttgaagtgattgaagaa
ccacctgatcatcaaatcgaagctcaagcaggtggtgaattactaaaaaccgaaagtagt
acaatgaatgttagcaagattaaaaaggctgtcaccaaattacgtgataccctcttgaat
tcaaaattggcttttcctctaatcatcttaattgcaaaacaaagattaaatattgttttt
aataatcaacaaagtggtaatgttagaatgatgtctgatttatatgacaagtgtcaagaa
acattattacaatttacagaatttttatcaacaaatgtatcaaataatgattatagtgga
ttatttggaaatttttcacaattggtaacaactttttatttggaacctgaaacttcattc
catatttatcgtccaatcatttctgctgctttccatgatacttccaactcttctacctct
acttctaccttatcatttgaacaattaatgaatcaatgtaaattaattcatccaccaaca
atatggaatagcctaagtttagaattgtatacattattttggtcattatcattgtatgat
attcatgtaccaaaacaatcgtatgaacaagagattcaaaagttgaaacaagcaaataca
gaaattgatcatgccattcaatcggaaaaggatcaaactgaaaagaatgccaaacgtcga
aaggatcgtgaacgcaacacccaaacaattgacaaattgtacaaggaaatggaagctcaa
attgcaaataatcaaaaggtcatggaacggttcatgtcattgaatcaaaaattcttttca
gaaggaaataccaaatcaacattgaaatttattcaatgttgtatttatccacgtgccatc
tttacaccaatcgatgccatctattgtagcaagtttgttcacctactccatacaaccaat
accccacattttacaccattactttattattacaatgtaactggtttaatttcattttca
attacatcgtatactgaaaatgaatctgttagatttggtagattcctaaaagaatccatt
tccattttaaatcgttggcgttcgagtgaaagcatttttgacaaggaatgtaaaccattt
aaaggattcattattgacacttcaagtaatattgtcaaatatgaagactttttcactgcc
actgccaaatggcatagtcaaatctgtgactcttttatcacttgtctacaatccagtgat
tacacggtcaccaaaaatgccttgttggcattgaccaaattaatcgatgtgttccctatt
caagttcaatcttatcaatctttggaacaagcagtatctaaaattcgttcagatagagaa
gaacttaaaattttggctactcgttatcattctttattagagaaaaacaaatcaaaaatt
gtagaaatttattcaaaaaatcaaagtaaaaagaaacttgaagataaaaaagatgataaa
aaagttgatgaaaaaaaggttgaagaaaagaaatctgaagaaaagaaagaagaaaagaaa
ttagaggaaaagaaatcagaagaaaagaaatcatcatcgactacaaatttgaaatcatca
aacaaatcaaataatgataaaatggatattgataacaaatcaaaggaaagagaaagagaa
agagaaagagaaagagaaagagaaagagaaaaagaaattagagaaagagaattaagagaa
aaagaaatgaaagaaaaagagattagagaacaacaaagagaaagacaagaaagagataga
gaaagagtagaaaaggaaaaagaaagagaaaaggaaagagaaagacaagaaagagaaaag
gagagagaaagacaagaaagagatagagaaagagaaaaagaaagagagcaacagttatca
agagaaagagatagagaaagagaacaacaattatcaagagaaagagatagagaaagaata
actgaaaaggaaagagaaagagaaaaggatcgtgaagtggaaagagatcgtgaaagagaa
atccaacttcgagaaaaggaaaaggaaagagaaaaacaagatcgtgaaaaggaaagagaa
aaggaaagagaattacaaatcataaaggaacgtgaagctgctagagaagcacgtgataga
gaaaataatagagaaaataatagatcaagtcaatctgatagaaaagatcttagagaaact
cttagagataatagatcaagagataatgataataatagagatcgtgataataatcataga
gataataataataatagagatagtaatagaaatgatcgtgataaatcaccaccctatatt
gaagatagaaaaagaagaaaggatgaaattcaaaaaccagatgaaagaagagacggaaat
aataataataataataatagtggtaataataatggaggagataaaactccaagatctggt
ggagaaaaaatgacacaattgagagaaaaactaaaagaaagtcaaaaagaaaaggacaag
gaaaaggaaaaagaaaaggatcctcatcatccaattccaattccaacaaattcttctcca
agtttgactgctagttcaagtacagcttcaccaacttctactcctccattgaataataat
aataattcgacaccaccaaaattggatcaacaatctcaaatggataatcaagatgatggt
aaaaagaaaagattaaatcgtaatagacaacaatctcctcccatttcattttcatctcct
cctctgaacaataataattctatagcttctccacctcctcctcttagatctggtggtaat
aattattcaaatcatccacgtgatcaaagagatttgccactaccaccattaccacaacaa
caacaacaaagaggtggagacagagataactttagagattcacgtgatcaaagagataga
gattttagagaacgtgaacaacaaagagaacgtgaacaatatgaacgtgaacaacaaaga
gaaagagaaatgcgtcaacaaaaagatcgtgatgctcgtgaaagaactattgatagaaga
agataa
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