Cavenderia fasciculata (cellular slime mold): DFA_05360
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Entry
DFA_05360 CDS
T02668
Symbol
rfc5
Name
(RefSeq) replication factor C subunit
KO
K10756
replication factor C subunit 3/5
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03030
DNA replication
dfa03410
Base excision repair
dfa03420
Nucleotide excision repair
dfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DFA_05360 (rfc5)
03410 Base excision repair
DFA_05360 (rfc5)
03420 Nucleotide excision repair
DFA_05360 (rfc5)
03430 Mismatch repair
DFA_05360 (rfc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfa03032
]
DFA_05360 (rfc5)
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_05360 (rfc5)
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_05360 (rfc5)
DNA replication proteins [BR:
dfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DFA_05360 (rfc5)
DNA Replication Termination Factors
ELG1-RFC complex
DFA_05360 (rfc5)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
DFA_05360 (rfc5)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DFA_05360 (rfc5)
Check point factors
HRAD17(Rad24)-RFC complex
DFA_05360 (rfc5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
Rad17
DNA_pol3_delta2
AAA_22
RuvB_N
AAA_7
AAA_11
AAA_assoc_2
AAA_14
DUF815
bpMoxR
AAA_16
AAA_3
AAA_30
AAA_5
ATPase_2
ResIII
AAA_18
AAA_24
AAA_28
nSTAND3
nSTAND_NTPase5
DEAD
AAA_19
Sigma54_activat
Viral_helicase1
RNA_helicase
MCM
nSTAND6
Mg_chelatase
AAA_lid_RFC1
SRP54
AAA_23
NPHP3_N
Bac_DnaA
FtsK_SpoIIIE
RCF1-5-like_lid
Motif
Other DBs
NCBI-GeneID:
14874923
NCBI-ProteinID:
XP_004361079
UniProt:
F4PL06
LinkDB
All DBs
Position
Unknown
AA seq
368 aa
AA seq
DB search
MDMDEEYLRKQTKEQRIHDSLPWVEKYRPKSLKELISHEDIIDTITKLIDKNSLPHLLFY
GPPGTGKTSTIQAVARKLYGDNYSRMVLELNASDDRGIDVVREQIKSFAGSMGIFNTNQF
KLIILDEADSMTNAAQTALRRVIETYTKTTRFCMICNYVGKLIPALQSRCTRFRFGRLGK
PQSIKRIKEIVEQEKYDIIMTDKLPINIFQTHTDCPPIHSNVMFRMNISDEAITSIELLA
EGDMRKSLNLLQSVSMSSDDGVQITDADIYRCAGVPSKRETVQILQWCIGEDFDEAYKNL
SNMKKEKGFSLVDIIKDVSVLIHKARNMDERAITSISKELAEIEYNLSFGASEKLQLGYF
VGAFQSAR
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggatatggatgaagaatacttaagaaaacaaacaaaagaacagagaatacatgatagt
ttaccatgggttgaaaagtatagaccaaagagtttaaaagagttaatctctcatgaagat
attatagatacgattacaaaactaatcgataagaattcattacctcatttattgttctat
ggaccaccaggcactggtaagacatcgaccattcaagcagtagctagaaaattatatgga
gataactattcaagaatggtattggaattgaatgcatccgatgatcgtggtatcgatgta
gttcgtgaacaaatcaaatcatttgctggttcaatgggtatattcaataccaatcaattt
aaattaattatattggatgaagcagattcaatgaccaatgcagctcaaactgcgctcaga
agagtcattgaaacctacaccaaaacaactagattctgtatgatttgtaattatgttggt
aaattgattcctgctcttcaatctagatgtactagatttagatttggtagattgggtaaa
ccacaatcaatcaagagaattaaagaaatcgttgaacaagaaaagtatgatataattatg
acagacaaactcccaattaatatattccaaactcatactgactgcccgcccatccattcc
aatgttatgtttagaatgaatatttcagatgaagcaattacatcgatcgaattacttgca
gaaggtgatatgagaaagagtttaaatcttttacaatcagtttccatgtctagtgatgat
ggtgtacaaataacagatgccgatatctacagatgtgcgggtgtaccatctaaaagagaa
actgttcaaattctacaatggtgtattggtgaagattttgatgaagcttataaaaattta
tcaaatatgaaaaaagaaaaaggattttcactagttgatattattaaagatgttagtgta
ttgattcataaagcaaggaatatggatgaaagagctattacatcgatatctaaagagttg
gcagagattgagtataatctgtcatttggtgcatctgaaaaattacaacttggttatttt
gttggtgctttccaatcagccaggtaa
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