Cavenderia fasciculata (cellular slime mold): DFA_05474
Help
Entry
DFA_05474 CDS
T02668
Name
(RefSeq) type A von Willebrand factor domain-containing protein
KO
K03260
translation initiation factor 4G
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_05474
03012 Translation factors [BR:
dfa03012
]
DFA_05474
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
DFA_05474
mRNA cycle factors
Stress granule specific factors
DFA_05474
Translation factors [BR:
dfa03012
]
Eukaryotic type
Initiation factors
eIF-4
DFA_05474
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA_3
MIF4G
MA3
VWA_2
VWA
VIT
Motif
Other DBs
NCBI-GeneID:
14875375
NCBI-ProteinID:
XP_004361193
UniProt:
F4PLC0
LinkDB
All DBs
Position
Unknown
AA seq
1697 aa
AA seq
DB search
MYSALWKKNGEQIRPSFISVNAHVVDLAAQIVFTKTYSNVGNNFKDNLQQEATFKAHLNT
SIGVLTGFEIKLDGKITSAEVVNQAEAMKQFESNQSNTNIVKEADFNDPFIQEDFFLCKL
NNLAQYNELEIIITYVTEMTMQGDYLYLVFPTSLSTVRSTQQQQQLETPPSLPNSHNNSN
GTSSTGESQRQGLLIKLDLEMPSSIQEVKSPSHPEGIEAQWNESTGTVIYKDTRPVDVVN
QSDLVVLVKLENPHEPTGFAERNKDGSRAVMVVFYPKLEPVKKQQEMELIFLVDCSESME
GYNITHAKKGLLLFSHSLPKGTYFNIISFGSTHQKLFPQSLPYCEENLAQANTFIKGLKA
DSGNDTNLLAPLKDIYATSATRPRKIFLLTDGGVNNTGQIAELVRQNADNTSVFPIGMGE
FVSKQLVDAIASAGCGVAELAIENETIENKVMRQLKRALQPAYTNIRMDWGSISSNKQSP
RDLRTLFDGDRLTVFSILEPNERVPDNGTVKLNANGPNGPVSFQVNIKGNEIKRGNLVHC
LAAYTLILDLEQQAQECNDVDEAERLKKRIIDLGVKYSLGTNYTSFISLEDPTMPPSPRV
IQPNNNKPTVTPTPVSSNNSFVQNNPAFSGLLNALNSSSGSIHHYPEHSSAMISLRGSAS
GIPTNLNSSSSSLKTNVSPSRPTTTTTNTTAPAVSTPLKSLSPASPPFTPTQSTMSSAAA
PFTPGAFAKSQLKFSAPEFVPKGIAPSTPSALKPSALVFTPTKTSTTPAVVTPTKAEEPK
KVEDPVKVEVVTPTKAVEEPKKEESPKKVEEPKVEVAAATATPVKVEESPKKVEEPVAKV
EVAAPVKVEVTAPVAAAVPAKVEVAAPVKVEVTAPVAKPAPVVVAAAAAAPVVAAAAANS
TSPPAKRQYSHDYLMSLKDLPSNTVIPEKLKQHANILMRAGSSGIFNKEKDRRGNRHHDK
KNSEPLPPPKKIITKDTQGEFGETYKKFKFNLNLITMDTYATIIKNFEGIVIPNEEVLGN
IAKILFEKAIIDQKYSAVFAILTHYLDSKYPKFENNKTLKRDIITNCQKEFELHLTDTYD
RSKFDTLSKEDRDEEEFIIKRRFLGNIKFIGELYKHSVLAESIVLNYCVAKLLEKANTHV
EDTIEGMAKLISNIGKKLDADPSKPGLAGVFSQVRQLSENEKLTSRARYLLLDLLDLRAG
RWEPKNNTISKVNKEENDKEERFVSKHGSGRRDDRDKGDRRDRNDRNDRGDRRDRDRHDR
NDRNDRNNRDDRNDRNDRGIFGKSKDGWETVGKSSPKGKQTPKKGDLSNSRDNISNSKTP
PRPAAPATLKKSGDERRNVFAALDDDDYDMPSSPKKPTPKDTGKQQESKDTKGKPADASA
AAQPVSATKLEADVSMTLDEFLELGDPEEALECIKELNYPTLYSKIICIIVNKSFEKNNT
EKQSIVELFNQIITSQIYPAEAFKEGFKEVLATIEDTEIDLPFASKFLAELIGFCIEADI
LTLNYVEENYLHLVDSGKAEEMLKDTLISIVKHSDSDRLVDIYEKTADLDILKLFRPKNR
TTQYLQEFFQEHFPYLSSDRVAVSQSEPSLIEHLLVLQKAEGNFELTNKLAGVLNIPLSD
IEKAENSDSLARTHPNIWATVLAYSFMSTNFTEEQDDLELINQKIQSWLNAELELPDAPK
LSLDDLVKKAKRFISEY
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgtattcagcattgtggaaaaagaatggagagcagatccgtccctcttttatatcggtc
aatgcgcatgtcgtagatttggcagcgcagatcgtgtttaccaagacctatagcaacgtt
ggcaacaactttaaagacaatctccagcaagaggcaacattcaaggcacatctcaacacg
tcgattggtgtgctgacaggctttgaaatcaagctcgacggcaagatcacgtcggccgag
gtcgtcaaccaagccgaagccatgaagcagtttgagagcaatcagagcaacaccaatatc
gtcaaggaggccgacttcaacgatccattcatccaagaggactttttcctctgtaaactt
aataatcttgcgcaatacaacgagctcgagatcatcatcacctacgtcaccgagatgacc
atgcagggcgactacctctacctcgtcttcccaacttcattgtcgaccgtccgttcaact
caacaacaacaacagcttgagactcctccatccctcccaaatagccacaacaatagcaat
ggtacctcctcgaccggcgagtcacaacgccagggtctgttgatcaagctcgatctcgag
atgccatcgtctatacaagaggtcaagtcaccctcacatccagagggtatcgaggcacaa
tggaacgagagcaccggcactgtcatctacaaggacacccgtccagtcgacgttgtcaac
caatcggatctcgtcgtcttggtcaagctcgaaaacccacacgagccaaccggttttgcc
gaacgtaacaaggatggcagtcgtgccgtcatggtcgtcttttatccaaaattagagcca
gtcaagaagcaacaagagatggaattgatcttcctcgtcgattgttccgaatccatggag
ggttacaatattacacacgccaagaaaggtcttttactcttctctcactctcttcccaag
ggcacctactttaatatcatttcatttggaagcacccatcaaaagctcttccctcaatcc
ctcccctactgcgaagaaaaccttgctcaagcaaacacctttatcaagggtctcaaggcc
gactctggcaatgacactaacctccttgcccctctcaaggatatctacgctacttctgcc
acccgtcctcgtaaaatcttccttcttaccgatggtggtgtcaacaacactggtcaaatc
gctgaattggttagacaaaatgctgacaatacttcagttttcccaattggtatgggtgaa
tttgtttcaaaacaattggtcgacgcaattgcaagtgcaggttgtggtgtcgcagaattg
gcaattgaaaatgaaaccattgaaaataaggttatgagacaattgaaacgtgctcttcaa
ccagcttacaccaacattagaatggactggggttccatttcgagtaataagcaatcacca
cgtgatttgagaacgttgtttgatggcgatcgattgacggtctttagcattttagaacca
aacgaaagagttccagacaatggtaccgtcaagcttaacgccaacggtccaaacggtcca
gtctcgttccaagtcaatatcaagggtaacgaaatcaagcgtggtaacctcgtacattgt
ttggctgcatacaccctcattttggatctcgaacaacaagcacaagaatgcaatgacgtc
gacgaagccgaacgtctcaagaaacgtatcatcgacctcggtgtcaaatacagtttgggt
accaattacacttcttttatctcccttgaagatccaaccatgccaccaagtccaagagtt
attcaaccaaacaacaacaaaccaacagttacaccaacaccagtttcatcaaataattca
tttgttcaaaacaatccagcttttagcggactccttaacgctttgaattcctcatctgga
tcgatccaccattatccagagcactctagtgctatgatttctctccgtggttcagccagt
ggtatcccaactaatctcaactcgagttcatcctcgctcaagaccaatgtctctccatcg
cgtccaactaccaccaccaccaacaccaccgcaccagccgtgtcgaccccactcaagtca
ctctcaccagcctctcctccattcactccaacccaatccaccatgtcatcggcagctgct
ccatttactccaggagcttttgcaaagtcacaattaaagtttagtgccccagaatttgtt
ccaaagggtattgctccaagcaccccaagtgccctcaagccatctgctctagttttcact
ccaaccaagacctcaaccaccccagctgttgtcaccccaaccaaggctgaagagccaaaa
aaggttgaagacccagtaaaggttgaagttgttaccccaaccaaggccgtcgaggaacca
aagaaggaagagtcaccaaagaaggtcgaagaaccaaaggttgaagttgccgccgccacc
gctactccagtcaaggttgaagagtcaccaaaaaaggttgaagaaccagttgccaaggtc
gaagttgctgctccagtaaaggttgaggttactgctccagttgccgctgctgttccagcc
aaggttgaagttgctgctccagtcaaggttgaggttactgctccagttgccaagcctgct
ccagtcgttgttgctgctgctgctgctgctccagttgttgctgccgccgccgccaactcc
acctctccaccagccaagagacaatacagccacgactatttgatgagtctcaaagatttg
ccaagcaacactgtcattccagagaaattaaagcaacatgccaacattttgatgagagca
ggttcatcaggtatctttaacaaggaaaaagatcgtcgtggaaaccgtcatcacgacaag
aagaactctgaaccactcccaccaccaaagaagatcatcaccaaggacactcaaggagag
tttggagagacctacaaaaagttcaagtttaacctcaatctcatcactatggatacttat
gccaccatcattaagaatttcgaaggtatcgtcatccccaacgaagaagtcctcggtaat
attgccaagattctctttgaaaaggccatcattgatcaaaagtacagtgccgtctttgcc
atccttacccattacctcgatagcaaataccccaagtttgaaaacaacaagactttgaag
cgtgacattattaccaactgtcaaaaggaattcgaattacatttaaccgatacttatgat
agatccaagtttgatactctctcaaaggaagatcgtgatgaagaagaatttatcatcaaa
agaagattccttggaaatattaaatttattggtgaattatataaacattcagtattggca
gaatctattgtattaaattattgtgttgccaagttattggaaaaggccaatactcatgtg
gaagacaccattgaaggtatggccaaactcatttccaacattggtaagaagctcgatgcc
gatccaagcaagccaggtttggctggtgttttctctcaagttcgtcaattgtcagagaat
gaaaagttgacatctagagcccgttatctcttgttggatcttttggatctccgtgcaggt
cgttgggaaccaaagaacaacaccatttccaaggtcaacaaggaagaaaacgacaaggaa
gagagattcgtatccaagcatggttccggtcgtcgtgacgatcgtgacaagggtgacaga
agagaccgtaacgaccgtaacgatcgtggtgacagaagagaccgtgaccgtcacgaccgt
aatgatcgtaatgatcgtaacaaccgtgacgaccgtaacgatcgtaacgacagaggtatt
ttcggaaagagcaaggatggttgggaaaccgttggcaagagctcgccaaagggcaagcaa
acaccaaagaagggagacctctccaactcgagagacaacatctccaacagcaagacccca
ccacgtccagctgccccagcaacactcaaaaagagtggagacgagagaagaaatgtcttt
gctgctctcgacgacgacgactatgacatgccatcttctccaaagaagccaactccaaag
gataccggcaagcaacaagaatcaaaggataccaagggcaagccagccgatgcatctgct
gctgctcaaccagtatctgcaaccaaattagaggctgatgtttcaatgacccttgacgaa
tttttggaacttggtgatccagaagaagctttggaatgtattaaagaacttaattatcca
actttatatagtaaaattatttgtattattgtaaacaaatcatttgaaaagaataatacc
gagaaacaatcaattgttgaattatttaaccaaatcatcacttctcaaatatatccagca
gaggcctttaaggaaggtttcaaggaagttttggctacaattgaagatactgaaattgat
ttaccatttgcttcaaagtttttggcagaattgattggtttctgtattgaagccgatatt
ttgacattaaattatgttgaagaaaattatttgcatcttgtagacagtggaaaggcagag
gaaatgttaaaggatactctcatctctatcgtcaagcacagtgacagcgacagattggtt
gacatttacgaaaagacagctgatctcgacattttgaagttgttccgtccaaagaacaga
accactcaatacttgcaagagttcttccaagaacacttcccatacttgtcatctgaccgt
gtcgccgtcagtcagtccgaaccatcactcattgagcatctcctcgtcctccaaaaggcc
gaaggtaactttgaattgaccaacaaattggctggtgtcctcaacatcccactctctgac
attgaaaaggctgaaaactctgactcgctggcacgtacccaccccaatatctgggctacc
gttcttgcctactctttcatgtcaaccaactttactgaagaacaagatgatctagagttg
atcaatcaaaagattcaaagctggttgaatgccgaactcgaactcccagacgctccaaaa
ctttcattggatgatctcgttaaaaaagcaaagagattcatcagtgaatattaa
DBGET
integrated database retrieval system