Cavenderia fasciculata (cellular slime mold): DFA_05633
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Entry
DFA_05633 CDS
T02668
Symbol
u2af1
Name
(RefSeq) RNA-binding region RNP-1 domain-containing protein
KO
K12836
splicing factor U2AF 35 kDa subunit
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_05633 (u2af1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_05633 (u2af1)
Spliceosome [BR:
dfa03041
]
Complex A
U2 snRNP components
U2 related factors
DFA_05633 (u2af1)
Complex B
DFA_05633 (u2af1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
RRM_1
Torus
Motif
Other DBs
NCBI-GeneID:
14875227
NCBI-ProteinID:
XP_004361351
UniProt:
F4PLS8
LinkDB
All DBs
Position
Unknown
AA seq
447 aa
AA seq
DB search
MADRRAAMFGTEKDHTNHIFSIYSFFLFFLSIRQNCPFYLKIGACRHGDRCSRLHNKPIV
SHTVILPNLYQSPYLRRGQNQPPVQATQEEIQKHFDEFYEDLHEGLSKYGRVELMHVCAN
LGDHLIGNVYVKYDTEEAAGAAVEGLRGRFYDGRPIVAEFSPVTDFNESRCRQFDMGTCD
RGGYCNFMHLHLPSKPLSIKLFGDRRSPSPGRGGGGGGDGGYQRGDDGFHRGGGDFYRGG
GRGGRGGYHRGGRGDYRGSDRRDYRDRGDRDYRRDDYYGDRDNRDNRDNRDHYRGGRDGY
PPNDRETGYKRSRSGSPSGRNNNGDQPQQPIDPVLQQQEKKMKPTEVGNETLDHNNNNNN
NNQHGGEFNNNNQSHSIQWATTEDNNNNNNNNNNNNNNNNSNDNNNNNNNVTEPYAAPPP
PPPSSSSDYDNNQPQNNSNNNQDQQQQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atggcagatcgtagagcagctatgtttggtactgaaaaggaccatactaatcacattttc
tctatctactctttcttcctcttctttctttcaatcagacaaaattgtcctttctacctt
aaaattggagcatgcagacatggtgacagatgttcaagattacacaataaaccaattgtt
agtcataccgttattttaccaaatctttatcaaagtccatatcttcgtcgtggacaaaac
caacctccagtccaagccacccaggaagagattcaaaaacactttgatgaattctatgag
gatctccatgaaggtctctcaaagtatggtcgtgtcgagttgatgcatgtttgcgccaac
ttgggtgaccatctcattggtaatgtctatgtaaaatatgacactgaagaagctgctggt
gctgctgtagaaggtctaagaggaagattttatgatggaagaccaattgtagctgaattt
tcaccagttaccgattttaatgagagtagatgtcgtcaatttgatatgggaacatgtgat
agaggaggttattgtaattttatgcatttacatttaccatccaagccattgagtatcaag
ttgtttggtgatagacgtagtccaagcccaggaagaggtggcggtggcggaggagacggc
ggataccaaagaggtgatgatggattccatagaggtggaggtgacttttacagaggtgga
ggtcgtggaggacgtggaggataccatagaggtggtagaggtgattacagaggaagcgat
agacgtgactatcgagacagaggagacagagactatagaagagacgactactatggcgat
agagacaacagagacaatagagataatagagatcactacagaggtggtcgtgatggatac
ccaccaaatgacagagaaacaggttacaagagatctagatctggttctccatctggtaga
aataacaatggtgaccaaccacagcaaccaatcgatccagttttacaacaacaagagaaa
aagatgaaaccaacagaagttggaaatgaaactttggatcataataacaacaataacaat
aacaatcaacatggtggtgaattcaacaacaataatcaatctcattccattcaatgggca
actactgaggataacaataataacaacaataataataacaataacaataataataataac
agcaatgacaataataataataacaacaatgttacagaaccatatgcagctccgccacct
ccaccaccatcatcatcatctgattacgacaataatcaaccacaaaacaatagcaacaac
aaccaggaccaacaacaacaataa
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