Cavenderia fasciculata (cellular slime mold): DFA_05984
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Entry
DFA_05984 CDS
T02668
Symbol
dhx35
Name
(RefSeq) DEAD/DEAH box helicase
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_05984 (dhx35)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DFA_05984 (dhx35)
Spliceosome [BR:
dfa03041
]
Complex C
Other components
Complex C specific factors
DFA_05984 (dhx35)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
HA2_C
DEAD
AAA_22
AAA_19
Cas3-like_C_2
nSTAND3
Flavi_DEAD
ABC_tran
AAA_30
ATPase
Motif
Other DBs
NCBI-GeneID:
14876421
NCBI-ProteinID:
XP_004361699
UniProt:
F4PJS4
LinkDB
All DBs
Position
Unknown
AA seq
666 aa
AA seq
DB search
MSSHNNNNNYSSQQQESSSSLSSSEDVLLFNNLNQRSLSITQQRLALPVYQLRKHILHLL
ETKQTLVVVGHTGCGKTTQIPQYLYEAGWCDGGRCIAVTQPRRVAATSVAVRVAEEMGES
TVGGKVGYTIRFDDQTTNTTAIKYMTDGMLLREMMVDPLLSRYPVVMIDEAHERSLSTDL
VIGLLKKVMVRRPDLRVIVSSATLDAEDFCNYFNLNKDSNDKTKDTCAILSIEGRNYPVD
LHYLEEPTANYVDTTVKTIVDIHLTQTPGDVLVFLTGQDEIETVRRQLIDRLSDDPTNQQ
HQYTIVPIYSGLPLEKQMKVFAPPNIHKRKIVLATNIAETSITIDGIVYVVDCGFVKIKS
YSGRSGTDSLVVVPTSQASANQRAGRAGRNRSGKCYRLYTEAAFAKLDVHTIPEIQRSNL
SSVVLQLKALGIDNILAFDFLSPPVADSLVRALELLYALGAIDDYAKLTSPIGMTMAELP
TEPPFSKMILSAASDFGCSEECLSIVAMLTIPGIQYNQSLVRKQFGVKEGDHLTLLNIYN
SYVDIKQKDQSGWCHDNGLNAKAMTRVLQGNNNNDTKKVDPSVLVRKAIVSGFFSNAARL
LPDGSYQTIKDKRNLWIHPTSIIGTINSPEWVIFHDVIITTKEFMKELTVIEPNWLSEIA
PHYYSK
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtcataataataataataattattcttcacaacaacaagaatcatcatcatca
ttgtcgtcatcagaagatgttttactatttaataatttaaatcaaagatcattgtcgatt
actcaacaaaggttagcattacctgtttatcaattaagaaaacatatattacatctactt
gaaacaaaacaaacgttggtggtcgttggtcatactggttgtggaaagactacacaaata
cctcaatacttgtatgaagctggatggtgtgatggtggaagatgcatagctgtcacgcaa
ccaagaagagttgctgctacttcggtcgctgttcgtgtggcggaagagatgggtgagtcg
acggttggaggcaaggttggctataccattagattcgatgaccaaactaccaacaccact
gcaatcaagtatatgaccgatggtatgttgttacgagagatgatggttgatcctttgcta
tcaagataccccgtggtgatgattgacgaagcacatgaacgaagtttaagtactgatttg
gtgattggtctgttgaaaaaggttatggtcagacgtcctgatttgcgtgtcatcgtgtcg
tcggctacactcgatgctgaagacttttgcaattactttaatctcaacaaggacagtaat
gacaagaccaaagatacttgtgccatcttatcgattgaaggacgaaactacccggtcgat
ctacactatctcgaggaaccaaccgcaaactatgtcgacacgaccgtcaagaccatcgta
gacatacatcttacacagacacccggtgatgtgttggtgtttctgacaggtcaagatgaa
attgaaacagtccgtcgtcaactgattgatcgtctgtcggatgatcccaccaaccaacaa
caccagtatacgatcgtgccgatatactcaggtctgccactagagaaacaaatgaaagtg
tttgcaccaccaaacatacacaagagaaagattgtattggccactaatattgcagagacg
tcaatcactatcgatggtatcgtgtatgtggtggactgtggattcgtaaagataaagagt
tatagtggacgttctggaaccgactctttggtggtggttccaacctcgcaagcatcggcc
aatcagcgagctggccgtgccggtcgtaatagatcgggtaaatgctatcgtctctacacc
gaagctgcatttgccaagctagacgtacacaccatccccgagatacaacgatccaatctt
tcatcggtcgtcctacaactcaaagcattgggaatcgacaatatattggcatttgatttc
ttgtcaccacccgtcgcagactcactggttcgtgcactcgaactattatacgcactcggt
gctattgacgattatgccaaactaacctcaccgattggaatgaccatggcagagctgcca
accgaacccccattctctaaaatgattctgtcggctgcttcagactttggttgctctgaa
gagtgtctgtccattgttgccatgttgaccatcccaggaatacaatacaaccaatcattg
gtcagaaaacaatttggtgtcaaggaaggtgaccacctaacactgctcaatatttacaac
tcctatgtcgacataaaacaaaaggatcaatctggatggtgtcacgacaatggactcaat
gccaaagcaatgacaagagtactccaaggcaataataataatgatacaaaaaaagtggat
ccaagtgtattggttagaaaggcaatcgtaagtggtttcttttcaaatgcagctagactt
ttaccagatggatcttatcaaactattaaagataaaagaaatttatggattcatccaacc
tctatcattggtactatcaattctccagaatgggttatcttccatgatgtaattattaca
accaaagaatttatgaaggaactaacagtcattgaaccaaattggttgtcagaaatcgca
cctcattattattcaaaataa
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