Cavenderia fasciculata (cellular slime mold): DFA_06908
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Entry
DFA_06908 CDS
T02668
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa00260
Glycine, serine and threonine metabolism
dfa00460
Cyanoamino acid metabolism
dfa00630
Glyoxylate and dicarboxylate metabolism
dfa00670
One carbon pool by folate
dfa01100
Metabolic pathways
dfa01110
Biosynthesis of secondary metabolites
dfa01200
Carbon metabolism
dfa01230
Biosynthesis of amino acids
dfa01240
Biosynthesis of cofactors
dfa04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
DFA_06908 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
DFA_06908 (shmt2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
DFA_06908 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
DFA_06908 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
DFA_06908 (shmt2)
Enzymes [BR:
dfa01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
DFA_06908 (shmt2)
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Paralog
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Neur
Motif
Other DBs
NCBI-GeneID:
14871974
NCBI-ProteinID:
XP_004358152
UniProt:
F4PX03
LinkDB
All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MLQATTKSLLPNAARYMFRSFASSKKPFGITTIKESDPQVYTLIKEEKERQFHGLELIAS
ENFTSRAVMEAIGSCFTNKYAEGLPGARYYGGNEVVDRLENLCIERALATYGLDPKEWGV
NVQPYSGSTANFAAFTGLLRPHDRIMGLDLPSGGHLTHGYQTDKKKISATSIFFESMPYQ
VGSNGYVDYDRMEANAALFRPKLLIAGASAYPREWDYERMRKIADKHGAYLLCDMAHISG
LVAGGQAVSPFTYCDVVTTTTHKTLRGPRAGLIFFRKRDDLDTKINFAVFPSCQGGPHEN
TIAGIAVALGEAKSSEFKSYAGQVRRNAAAMATALKQRGYSMVTDGTDNHLVLWDLRPQG
ITGSKIEKACDEAAITVNKNAVYGDTNAIAPGGVRLGAPALTSRGLTEKDFEKVVEFLDR
VVKISIAIQDKVGKKMPDFQRAIADSNELKELKKDVQAFSKQFNMPEYYEDEPQDLAKEM
DR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaagcaactaccaaatcattacttccaaatgctgcaagatatatgtttagatca
tttgcttcttccaaaaagccatttggaattacaacaatcaaagaatcagatccacaagta
tacactttaatcaaagaagaaaaggaaagacaattccatggattagaattaattgcttca
gaaaatttcacatcaagagcagtaatggaagcaattggatcatgttttacaaataaatat
gcagagggattaccaggagcaagatattatggtggtaatgaggttgttgatagattagag
aacctttgtattgaacgtgcattggcaacctatggattggatccaaaagagtggggtgtc
aatgtacaaccatattcaggcagtacagccaactttgcagcattcacgggtctgttgcgt
ccacacgaccgtatcatgggtttggatctgccatctggaggccatttgacacacggttac
cagaccgacaagaaaaagatctcggcgacatcgatctttttcgaatcgatgccataccaa
gtcggcagcaacggctacgtcgactatgaccgtatggaggccaacgccgcactcttccgt
cccaagttgttgattgccggtgcatcggcatacccccgtgaatgggactatgagcgtatg
cgtaagattgccgacaagcacggcgcatacttgctctgcgatatggcccatatctctggc
ttggtggctggcggtcaagccgtgtcgccattcacctactgcgacgttgtcaccaccacc
acccacaagaccttgcgtggtccacgtgcaggcctcatctttttccgtaagcgtgacgat
ctcgacaccaagatcaactttgcagtcttcccatcgtgtcaaggtggcccacacgaaaac
acgattgccggtatcgccgtcgcactcggtgaagccaagtcttcagagttcaagagctac
gcaggccaagtgcgtcgcaacgccgctgccatggccaccgccctcaagcaacgtggctac
tcgatggtcaccgacggcaccgacaaccatctcgtactctgggatctccgtccacaaggt
atcactggcagcaagattgaaaaggcatgcgacgaagctgccatcactgtcaacaagaac
gccgtctatggcgacaccaacgccattgccccaggtggcgtgcgtcttggcgctccagcc
ctcacctcgcgtggtctcactgaaaaggatttcgaaaaggtcgtcgaattcttggaccgt
gtcgtcaaaatctcaatcgccatccaagacaaggttggaaagaaaatgccagacttccaa
agagctattgccgattcaaacgaactcaaggaattgaaaaaggatgttcaagccttttca
aaacaatttaatatgccagaatattatgaagacgagccacaagatcttgccaaagagatg
gatagataa
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