Cavenderia fasciculata (cellular slime mold): DFA_06937
Help
Entry
DFA_06937 CDS
T02668
Symbol
BRIP1
Name
(RefSeq) DEAD/DEAH box helicase
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03440
Homologous recombination
dfa03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
DFA_06937 (BRIP1)
03460 Fanconi anemia pathway
DFA_06937 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_06937 (BRIP1)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
DFA_06937 (BRIP1)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
DFA_06937 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
DFA_06937 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
Vac_Fusion
Motif
Other DBs
NCBI-GeneID:
14871832
NCBI-ProteinID:
XP_004358181
UniProt:
F4PX32
LinkDB
All DBs
Position
Unknown
AA seq
1125 aa
AA seq
DB search
MSQPSSQPQKKVISLKISSKPSSTSTDSIYNQKSTFAPVTPIKSEYNAASSTQSPYSNYN
KGGGYNGYNKSWSNTSTTSTTSTTSNNTSNTSTTQPDTVEWSKSEDGTTYKINGHNIKFP
YEPYDTQATMMHRILEACEKGQNALLESATGTGKTLSLLCATLEWQKGKLAERDSNINAL
ARAEREKANKERYLMEERRKRPKKDEDTKIVSSDMSFLDDFSDTGVKLQSDYVPLNGNGQ
RTMSAHHQQSSQQSQQSQSQSQSQSTTPPSTPYGGSAATSPTTNVSTPDLLEKAKEEVAS
VPKIFFCSRTHSQIAQLTSELLKTPYRPRMCVLASRDHYCINPKLAGYDRKKDKCRKVRK
ERNCRFERRTKQYSLSQIPKFLPGGEKEVWSIEDFIDGGKDLGECPYYASKGFIEHANLI
FCPYNYIIEPSIRKIFKEHFDNSIIIFDEAHNIEDSLMSAASFELTKEEVNESTTQCKDT
MSNSMIMDQATPNEKETMLYLYSLFDKMGTWMSRNEKVLTDQDYKNQNNVWSGRKILEVL
EKDFGLTAANYRKLRESLDRLEKDDTEGGGTVSAETPNKPGEKGLADEHQSKTKQRVKME
KRDNELLSPKILGILANLAQVYDFVFGNLQFISDFRMFFQRQEVYGIWCMNPRSAFKSIR
EKARTIILTSGTLAPLNSFASELSSPFPVTAELGNLGDITKRVWIGTLGVGTNNTKMDCT
FKGSENLQFQDALGDAILKHLQVVPNGVLVFFPSYAFMEKIKNRWEMTGMYNKIDQCKPI
FFEPKQTKDFKRVLEGYNDAVKTGATLFSVCRGKVSEGINFSDEYARGVIIVGIPLPNIK
DLRVDLKKKYNDSNCSIIQNLINGNEWYTLQGYRALNQAIGRCIRHKDDYGSILLIDSRF
TQESVWRNLSRWARMCIKNNNSIDRSLPSLKSFFDSRKLLEQTKDNERRSSYNSPPHQQQ
QQTSPSSASSSSSWTTKNKFSPTIAKVKDEYSTSTTSTTSTTSTNSCQQTPKKAVSLNIS
KNSYNVNNSYNTNYNINNNNNNNNNNNNNTNSNYNSNGKRVASQEVISLDEDSDPIEYLG
SAIKKQAPATSTSTSTYNFSRRTNLQQYKPSSSSSSSSSDMNHGF
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaccatcatcacaaccacaaaagaaggtaatctcgttaaagatatcatcaaag
ccatcttcaacatcgaccgatagcatttacaatcaaaagagtacatttgcacctgttaca
cctatcaaatcagagtataatgctgcttcatcaacacaatcaccttattcaaactataat
aaaggtggtggttataatggttataataaatcatggtcaaatacatcaacaacatcaaca
acatcaacaacatcaaataatacatctaatacttctacaacacaaccagatacagtagaa
tggagtaaatcagaagatggaacaacatacaagatcaatggtcataatattaaattccct
tatgaaccttatgatacacaggcaactatgatgcatagaatattagaggcttgtgaaaag
ggtcagaatgcattgttggagtctgcaactggtacgggaaagacactgtctttgctatgt
gcaacactcgagtggcaaaagggcaagttggcagaacgagactccaacattaacgcattg
gcacgcgctgaaagggaaaaggcaaacaaggaacggtatctaatggaagaacgaagaaaa
cgacctaaaaaggatgaagataccaagattgtatcgagtgatatgtcctttctcgatgat
tttagtgatactggtgtaaagttgcaatctgattatgtaccacttaatggtaatggacaa
agaacaatgtcagctcatcatcaacaaagttcacaacaatcacaacaatcacaatcacaa
agtcaaagtcaaagtacaacaccaccttcaacaccatatggtggttctgcagctacatca
ccaacaaccaacgtatcaacaccagatttattagaaaaagcaaaagaagaagtggcatca
gtaccaaagatattcttttgttcaagaactcattcacaaattgcacaattgacctctgaa
ttgttaaagacaccttatagaccacgtatgtgtgtattggcatcaagagatcattattgt
atcaatccgaaattggctgggtatgatcgtaaaaaggacaagtgcagaaaagtaagaaaa
gagagaaactgtcgattcgaacgtcgtaccaagcaatactcactctcccagataccaaag
ttcctaccgggtggagaaaaggaggtttggtcaatcgaagatttcatcgatggtggtaaa
gatctcggtgaatgtccatactatgcttcaaaaggtttcatcgaacatgcaaatctaatc
ttttgtccttacaattatatcattgaaccaagtatccgtaaaatttttaaagaacatttt
gataattcaattattatttttgatgaagctcataatatagaagattcattaatgtcagca
gcaagttttgaattaacaaaagaagaggttaatgaatcaacaacacaatgtaaagatacg
atgagtaattcaatgattatggatcaagcaacaccaaatgaaaaagagacaatgttgtat
ttatattcattgtttgataagatgggtacatggatgtcaaggaatgaaaaggtactgacc
gatcaagactataagaatcaaaacaatgtatggtctggtagaaagattctagaggttttg
gaaaaggattttggattgacagctgcaaattatagaaagttgagggaatctctggatcga
ttggaaaaggatgatactgaaggtggtggtactgtttctgcagaaacaccaaacaaacct
ggtgaaaagggtcttgccgacgaacaccaatcaaaaacaaagcaaagagttaaaatggaa
aaacgtgacaatgaattactgagtccaaagatcttgggtattttagcaaatcttgctcaa
gtctatgactttgtatttggcaacttgcaattcatttccgattttagaatgtttttccaa
cgtcaggaagtttatggtatttggtgtatgaatcctagatcggcattcaaatcgattcgt
gaaaaggcacgtaccatcattttaacatctggtacattggcaccgttaaattcatttgcc
agtgaattgtcatcgccgttcccagtgactgccgaactcggtaatctaggtgacatcacc
aaacgtgtttggattggtacgcttggcgtaggcaccaacaataccaagatggattgcaca
ttcaagggatccgagaatctccaatttcaagatgcactcggcgatgctatcctcaaacac
cttcaagtcgttccaaatggagtattggtctttttcccaagttatgcatttatggaaaag
ataaagaatcgttgggaaatgactggcatgtacaacaagattgatcaatgcaaaccaatc
tttttcgaaccaaaacaaaccaaggatttcaaacgagtgttggaaggatacaatgatgcc
gtcaaaacaggtgccaccctcttttcagtgtgtcgtggtaaagtcagtgaaggtatcaac
ttttcagacgagtatgctcgtggtgtcatcattgttggtattcctcttccaaatattaaa
gatctcagagttgatcttaaaaagaaatataatgattcaaattgttcaattattcaaaat
ttaattaatggaaatgaatggtatacacttcaaggatatagagcattaaatcaagcaatt
ggtagatgtattagacataaagatgattatggatcgattttattgattgatagtcggttt
actcaggagagtgtttggaggaatctttcaagatgggcaagaatgtgtataaagaataat
aattcaatcgatagatctctgccttcactcaaatcattttttgattcaagaaaactttta
gaacaaacaaaagataatgaaagaagatcttcttataattctccacctcatcaacaacaa
caacaaacatctccatcatctgcatcatcttcatcatcatggacaacaaagaataaattt
tcaccaacaatagcaaaagttaaagatgaatattcaacttcaactacttcaacaacatca
acgacatcaacgaatagttgccaacaaacaccaaaaaaagcagtttctttaaatataagt
aaaaatagttataatgttaataatagttataacacaaattataatattaataataataat
aataataataataataataataataatacaaatagtaattataatagtaatggaaaaaga
gtagcatcacaagaagttatcagtttggatgaagatagtgatccaatcgaatatttagga
tcagccattaaaaaacaagcccctgcaacttcaacttcaacctcaacctataattttagt
cgtcgaaccaatctacaacaatataaaccatcatcatcatcatcatcatcgtcatcagat
atgaatcatggtttttaa
DBGET
integrated database retrieval system
