Cavenderia fasciculata (cellular slime mold): DFA_06976
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Entry
DFA_06976 CDS
T02668
Symbol
ssrp1
Name
(RefSeq) structure-specific recognition protein 1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
dfa03000
]
DFA_06976 (ssrp1)
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_06976 (ssrp1)
Transcription factors [BR:
dfa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
DFA_06976 (ssrp1)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
DFA_06976 (ssrp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PH1_SSRP1-like
POB3_N
Rttp106-like_middle
SSrecog
BDV_P40
GAPES3
CCDC106
Motif
Other DBs
NCBI-GeneID:
14872431
NCBI-ProteinID:
XP_004358220
UniProt:
F4PX70
LinkDB
All DBs
Position
Unknown
AA seq
510 aa
AA seq
DB search
MSTANNGSTGAFSFNNISLGGRIGGTRGVLKMNNVGLAWKSEAGRSETIQSSEIEAAGWT
RMTPKIYQLNLKMKGGASVKFDGFREPDNETLKQFFKENYDIELDNIELSTRGVNFSMVK
VNGSIVSFTGSNQKTLFEFPISEISQSIINLSNKNELTMEFHHDSTLDEEDESLVEVRLY
NPFSKSLKEDEDNTEDPVKDFQDALLRKSDISQVGKRIAVLENIQLVTPRGRCDVEMYPT
FLRLHGKTHDYKVIYNTISKLFQLPKQDQANMYFVISLDPPVRQGKTKYDHLVIQLPKNQ
EASVELNLTDEAQEKYKDKLSPTMDGTFYVIVRRILTSLTGKNIIVPGNFQSANQFNSIK
CSLKANEGDLYPLERSFFFIYKPPTYIKFTDIDFIEFSRAPTSVTGRNAPSSRNFDLGIT
LKNQTNIQFTNILKEEYENLHNFIQSKGIKVAKQEQAAPMRMLVDEDDSDDDDYEPDEDE
ESSDDDDAAESSSESSSEEEKKTKKKQKKN
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtctacagcaaataatggttcaacaggagcattctcctttaacaatatatcattgggt
ggtagaataggaggtacgagaggagtattaaagatgaataatgtaggtttagcatggaag
tctgaagcaggtagaagtgaaactatacaaagtagcgaaattgaagcagctggttggaca
agaatgacaccaaagatatatcaattgaatcttaagatgaaaggaggtgcttctgtaaag
tttgatggttttagagaacctgacaatgaaacattaaaacaattctttaaagaaaactat
gatattgaattggataatattgaattatcaacaagaggagtaaacttttcaatggtcaaa
gtgaatggtagtattgtatcatttacaggatccaatcaaaagacactctttgaattcccc
atttcagagatttcacaatcgatcattaacctcagcaacaaaaatgaattgactatggag
tttcatcacgactctacattggacgaagaggatgaatcattggtagaggttagactttat
aatccattctcaaaatctctcaaagaggatgaagacaacactgaggatccagtcaaggac
tttcaagatgccctcctcagaaaatcagacatttctcaagttggaaagagaattgctgtt
ctcgaaaatattcaactcgtcacaccaagaggtagatgtgatgttgaaatgtacccaacc
tttcttcgtcttcatggtaaaactcatgattacaaagtcatctataataccatttcaaaa
ttattccaattaccaaaacaagatcaagctaatatgtattttgttataagtttagatcca
cctgttagacaaggtaaaactaaatatgatcatttggttattcaattaccaaagaatcaa
gaagcatcagttgaattaaatttaacagatgaagcacaagaaaaatataaagataaatta
tcaccaactatggatggtacattttatgtaattgttcgtagaatcttgacatctttgaca
ggaaagaacattattgtgcctggaaacttccaatctgccaatcaattcaacagtattaaa
tgttcactcaaggcaaatgaaggtgatttatatccattggaaagatcattctttttcatc
tacaaaccaccaacctatatcaagtttaccgatattgactttattgaattctctcgtgct
ccaacttcggtcactggtagaaatgctccaagtagtcgtaactttgatcttggtatcact
cttaaaaatcaaacaaatattcaatttacaaatatcttaaaggaggaatatgaaaattta
cacaactttattcaatcaaaaggaatcaaggttgccaaacaagaacaagcagcacctatg
cgtatgcttgttgatgaagatgactctgatgatgatgattatgaaccagatgaagatgaa
gaatcatcagatgatgatgatgctgctgaatcatcctcggaatcctcatctgaagaagaa
aagaaaactaaaaagaaacaaaaaaagaattaa
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