Cavenderia fasciculata (cellular slime mold): DFA_07096
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Entry
DFA_07096 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DFA_07096
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_07096
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DFA_07096
mRNA degradation factors
5'-3' decay
Decapping complex
DFA_07096
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
14872153
NCBI-ProteinID:
XP_004366965
UniProt:
F4PVG8
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MNTYIKGDNTIIPIKPKKSESEKPIEREEMSAPNYFDDDLLATDDQINYEEQEYDDDETF
GDTGPLNDEWENQHTSLAHEHEGFVVDNKIRDGVQLKRYDDQEDLGDDGSLLEDDEDYRN
GNGKDADGRSSFFSDLPPVNNNNNNNKQNRQQQQQSNAQGRTVGMFSSLSLYDDKEKSPN
NNNNNNQVDNDQLESMFKIAMGEIPTTSIPQALTPHNSLNNVPTTPQHHQQQQQPQQSPI
DPLKKLFQSGVPQQSPNKLEALKGAYSLSDLEAKFEQQSQQQSSVSQVVEQQQENVQQQQ
QQPQTPQGKNNINNNNRNSSPSRPGFTLGDAIPGNREYQQHQRILRDQARDANWNQHQSP
RGDGGGGGGAPPTSPYNNNKYNKNAQNGKSPMKQPHIQDKKYMSADEIQTIHRLQAYQLH
YTNPYIEDFYFQKLKERSGVVIQQFTHTPICDSLPKTITKKPTTTADPLLGALGRIPSHS
IRAPRPILQIILDKDENEQYDKTVQSSDQTIKLAIESSYNHLLDIEDIDQLINNQQQSAS
TDNQQLIDLQAKKEQIAQDLFKSLHLDPFPCFKFESPLLPQQTPDQKWPSVCPEDLLFVS
LWVIGKGRKLLNRAFLSLTSPQSVSALFAVCRNLPLLLMLHLPEGSEAATNGIYRTVSRW
VMEIPIQFFTLAFHFLVNFNQPQFLTKVFSHRNGLAVIEQFLLRGYLVQDQAYLLHNNLQ
MDPVAVLQFHEIFGRFFQRLTGNFANIFSQQQPSQSPNIPPQPYPELVKIHSLLFHHSNE
AQKNILSMELGMNNNNMMMR
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atgaacacatatataaaaggagacaatacaataataccaatcaaaccaaagaagagtgag
tctgaaaaaccaatagagagagaggagatgtctgcaccaaactactttgacgacgatcta
ttggcaacagacgaccaaatcaactatgaagaacaagaatacgatgacgatgaaaccttt
ggtgatactggtccattaaatgacgaatgggagaatcaacatacatcattggcacatgaa
catgaaggatttgtagttgacaataaaataagagatggtgttcaattaaagagatacgac
gaccaggaagatcttggagatgatggtagtctcttggaggacgacgaagattatcgtaat
ggtaacggtaaagatgcggatggtagatcatcatttttttcagatcttccaccagtaaac
aacaacaacaacaacaacaaacaaaaccgtcaacaacaacaacaatcaaatgcacaaggt
agaactgttggaatgtttagttcattatcactttatgatgataaagaaaagagtcccaat
aataataataataataatcaagttgataatgatcaattagaatcaatgtttaaaattgca
atgggtgagattccaactactagtatccctcaagctctaacaccacacaattctttgaat
aatgttccaactaccccacagcatcatcaacaacaacaacaaccacaacaatctccaatt
gatccattgaaaaaattgttccaatctggtgttcctcaacaatctccaaataaattggaa
gcattaaaaggagcatattcattatctgatttggaagctaaatttgaacaacaatcacaa
caacaatcctctgtttcacaagtggtcgaacaacaacaagaaaatgtacaacaacaacaa
caacaaccgcaaacacctcaaggtaaaaacaatataaacaataataatagaaactcgtca
ccatcaagaccaggatttacccttggtgatgctataccaggcaacagagaataccaacaa
catcaacgtatactaagagatcaagcaagagatgcaaactggaatcaacatcaatcaccc
agaggcgatggaggaggaggaggaggagctcccccaacttcaccatacaacaacaacaaa
tacaacaaaaatgcccagaatggtaaaagtccaatgaagcaaccacacattcaagacaaa
aagtacatgagtgccgatgaaattcaaactattcatagattacaagcttatcaacttcat
tatacaaatccatatatagaagatttttattttcaaaaattaaaagaaagatcaggagtt
gtaattcaacaatttactcatacaccaatttgtgattcacttccaaaaacaattacaaag
aaaccaactacaacagctgatccattacttggtgctttgggacgtattccatctcattca
attagagctccaagaccaatcttgcaaattatacttgataaagatgaaaatgaacaatat
gataaaactgttcaatcaagtgatcaaactattaaattggcaattgaatcatcatataat
catttacttgatattgaagatattgatcaattgattaataatcaacaacaatctgcatct
actgataatcaacaattaatagatcttcaagccaaaaaggaacaaatagcacaagaccta
tttaaatcacttcatttggatccattcccatgtttcaaatttgaatcaccattattacca
caacaaactcctgatcaaaaatggccttctgtttgcccagaagatttattatttgtatca
ttatgggtaattggtaaaggtagaaaattattgaatagagcctttttatcattgacatca
ccacaatcggtatctgcgttatttgcagtatgtagaaatcttccattattattaatgttg
catttgccagagggaagtgaagctgcaaccaatggaatctaccgtaccgtttcgagatgg
gtcatggaaatcccaatccaattcttcacacttgcctttcactttttagtcaactttaac
caaccccaattcctgaccaaggtgtttagccaccgcaacggtttggccgtcattgaacaa
ttccttctcagaggctatctcgttcaagaccaagcctacctcttgcacaataacctccaa
atggatccagttgcagtactccaattccacgaaatctttggacgtttcttccaacgtctt
actggcaactttgcaaatatctttagccaacaacaaccatcacaatcaccaaatattcct
ccacaaccatacccagaactcgttaaaattcattccctcttatttcatcattcaaatgaa
gctcaaaagaatattctttcaatggaattgggtatgaataataataatatgatgatgaga
taa
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