Cavenderia fasciculata (cellular slime mold): DFA_07201
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Entry
DFA_07201 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dfa03016
]
DFA_07201
Enzymes [BR:
dfa01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
DFA_07201
Transfer RNA biogenesis [BR:
dfa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
DFA_07201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
CDC45
Presenilin
Motif
Other DBs
NCBI-GeneID:
14872308
NCBI-ProteinID:
XP_004367067
UniProt:
F4PVS0
LinkDB
All DBs
Position
Unknown
AA seq
349 aa
AA seq
DB search
MNLIKIYKPFKKQQNEQDGNHLNCFVWDSKDVQEIREQYRIVGKIIGSTQESKFHTRILF
GTIPLLLNPLEVLLGMEKGWFLLIEDELILCPTQSDLQKFNDKREQDLNNQIKDIIETKR
QKDEQFKKKKIEEEEQQTNQSITTTDEGETNQKEKENVNKQKQGKVKKQKKEHVIDETNG
SSTSIITNQPTIMTEEKKQKQFQQYLEGTTTVTIYSSIQEASDEGMIKRPGRINRLVGVE
EFKKMIKEDDPTGMLWNQYLVFRDLWERGYHLTMGLKFGGTFLAYPGDPILHHSDFIVVV
KDFKESFKSNDILFMTRLAINVKKTILLSSFNPNTNSLSYHSISWQGVT
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaataaagatttataaaccatttaaaaaacaacaaaatgaacaagatggtaat
catttgaattgctttgtttgggattcaaaagatgtacaagagataagagaacaatataga
atcgttggaaagattattggaagtacacaagaatcaaagtttcatacacgtattttattt
ggtacgatccctcttttattgaatcctttagaggtgttgttgggaatggagaaaggttgg
tttctattgatagaggatgaactcattctatgtccaacacaaagtgatcttcaaaaattc
aatgacaagagagaacaagacctcaacaatcaaatcaaagatatcattgaaacaaaaaga
caaaaagatgaacaatttaaaaagaaaaagattgaagaagaagaacaacaaacaaatcaa
tctattacaacgacggatgaaggagaaacgaatcaaaaagaaaaagaaaatgtaaacaaa
caaaaacaaggaaaagtaaagaaacaaaaaaaagaacatgttattgacgaaacaaatggg
tcatcaacatcaatcattacaaatcaaccaacaataatgacagaagaaaaaaaacaaaaa
caatttcaacaatatttagagggtactacaacagtgaccatttattcatcgattcaagag
gcaagcgatgaaggtatgattaaaagacctggtagaatcaatcgattggttggagtagag
gaattcaagaaaatgatcaaagaggacgatccaacaggaatgctttggaatcaatacctt
gtatttagagatctttgggaacgaggatatcatctaacaatgggattaaaatttggtggc
acttttctagcttatcccggtgatcccatactgcaccattcagatttcattgtggttgta
aaggattttaaagaatcatttaaatcaaacgatatattatttatgaccagattggcaatc
aatgtaaaaaaaactattttattatcatcttttaatccaaatacaaactctttatcttat
cattccatttcatggcaaggtgttacttaa
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