Cavenderia fasciculata (cellular slime mold): DFA_07212
Help
Entry
DFA_07212 CDS
T02668
Name
(RefSeq) putative guanine nucleotide exchange factor
KO
K20161
DENN domain-containing protein 2
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dfa04131
]
DFA_07212
Membrane trafficking [BR:
dfa04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
DFA_07212
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
LRR_8
DUF2340
LRR_4
uDENN
dDENN
LRR_14
LRR_13
SPA
LRR_1
Reb1_MybAD
Motif
Other DBs
NCBI-GeneID:
14872495
NCBI-ProteinID:
XP_004367078
UniProt:
F4PVT1
LinkDB
All DBs
Position
Unknown
AA seq
2085 aa
AA seq
DB search
MSSEEQQQQQSNNGLVTVRVVKSLEYRNIKNLVLRDIDLNMKVSEFKEYVKNNEDRLTDC
GVINETEISFFNLEDYNNFKANPKERKIEDESSINDVYKNGAGGIIPFVKDVYPPDQVDP
NVPLFCFPEEIDNKAFMNQTYTPSKSSESFSFVLTDREGNQQFGFTRRIVTAVPTLGRIP
ESLCIISKHAWFSTFIAILEILEVRYRASMEEIHNFLAAALLSAIPAPGDTFTVYIYNNP
FISASSSSSSSTSTTTSPSATTITGTRDRSLSTPNLTISTGGAGDPHHQSDKSSQPLPVS
YQLKRPLATDKSSLHDGTLLPLIESLTSQKILSLFISLLFERRIIIYSENISRVSKFVNA
AVSMIDPFVWQHIFIPILPRSLLDYVTAPMPFIIGIHSSLFPLIRKKPLSEIIYVDLDKD
HVLPLPEDIALFPPQLLQPLKVCLDLQIADFKKNKHYDNKVIVDTFRKFFVTIMGTYRRF
FLKDLDKRKSIFDKASFIDSQIINPAKFFTTFCSSQMFERFIAEREEYFFKGITPPGSFE
KEVILYDLKHPVTASINNTLKNKEKEKEKEREKERLEKERAKSVAKANAYKTVLDPKRLS
VLNPPKSNGLSVDRSFLSSLIGTNNNSSATVGSLTVVNTSTPSTSPSLPRAASPTMTRST
TMGSISSKAQTMTALEVGSLAPLTDVQLPIPAHIQQQQQQQKLQQQQQLLQQQQTSEQQG
GVSLPKPKSHTNLASLASNIVQNAASITKSTSASFTLGHGQSLLPPNPTLPSGNQSLSSA
THTGGSHSRTLSDVGNIILSVTKKSTQILSSGTTQPTKPIASDQTLNSNNVNTAATSNVI
PPTTTAAANTTTTNNTVQIIQTHPNSPTRMGIGHRSLPFTLIHQKFSPNDPTRMTIEDIF
NLFYPGQKPSNGTTTPVVTPHQPVTSTSGMKKSTSQEKNIFKIPELPDNISIPLSINKTN
KNQFMTQASGSAGNINTQHATNTNSGIQLTASAPANPTIISSSYAVSDKSTLPPPPISAH
SILHRRTHQRSVSEKELLEAEKEQLLLQQQQIQQVQQVQVQQQPMVVAAGGGGIQQPQPS
LRLSSSSVPKPITTSSQLEQQQQQQQHLQPIVENVLQQQQQQQEHNGLPPLTSTVQLPIP
VANVDHNPLPPLNTGAPVVVDLNTSGSSLIHRSGGTPMMCRTMSSNNFFDNNPLSTNIET
SPAVVLASSTASCSSSNSNFFNECSLLGVPSSLPHIAGSTPLSTATSSVAALSSTSSLNS
SYGSFTSAVLNNSNILSASGMMMMPPSAAMISAAAAAQQGQQQQHTQPQQQQQPQQPQQQ
QVSVPVSSTPVVPVSAAVASGGGVPSQQQQQQQQQQPNNNHSNASSFSSNQNVVTSSTSN
VLPPLIPHGGSTTSLLPPPASLHSNHFFDQSPLSQSSFVDFGPPAPSLPGLNNNSNGPYN
QMLASSTPPTYTQPQQVQPQQQPPVQQGENVSLEREMVKANIKECLKNEDTAIPLELDLN
SLKLNKFPSELKKEIYRDKKKLVKAMIKKLDVSINKLNDFKWDLSSSFDQLDYLNLSGNP
LSSLMTIGLPGSVYLKTITKIDVCGCKLLRVGQNDLRQLTNLAQLNLSNNEIGEIHPEAL
SCLAQLEDLNVSGNSSLKAIPEAVLKCRQITHLDVSGCSINELPHDLSPLAKMLELNLGN
NNISEIPDSISLLVFLCRINLQDNNIRNLPLSIGKCRGIVSQMNGIILHGNPLDAEIKQL
YNENPAKLAAYLERRYQLQGGDTLNFKLAAQYKHQQQQPAAATPTKSSPPLYPQSPPNTG
YPIATTTSTTTSSNQANSAASSLQSNTPTTSVLSTSNGSSMASSPRSYKLSVSNEAWREL
PNHIPGPKHNLGGGGSSASSSPISSSPMTNPLRLSQQYQQQQPPPSPLHHSAGGIRTQFQ
FSDSPSSSPSTPSPLSSSPQFMTQQQQQHPEDPTVTMMKENIYGMIKNEFRQNITSIYEK
VNKSSNVKELIQFATIVRSIQSELDDIGKILAYKKIYLPNIEKNIGSNASETEKFNQLKQ
LVKSKIEICVIYSKHTIEHVDIQHSMSDLSFVYRVIKSLSNKLTL
NT seq
6258 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtgaagaacaacaacaacaacaaagcaacaatggattggtgacagtcagagtc
gtaaagtcactcgaatacagaaatatcaagaatctagtactacgtgacatcgatttgaat
atgaaggtttcagagtttaaagaatacgttaaaaataatgaagatagattaacagattgt
ggagtgatcaatgagacagagatatcattctttaatcttgaagattacaataattttaaa
gcaaatccaaaagaaagaaagattgaagacgagtcatctatcaatgatgtatataaaaat
ggagcaggaggaattataccatttgtaaaggatgtttatccaccagatcaagtcgatccc
aatgtaccattgttttgttttccagaggagattgataacaaggcgtttatgaatcaaacc
tatacaccttcgaaatcgagcgaatccttttcatttgtattgacagatagagagggaaac
caacagtttggattcacacgtcgtatagtgactgctgtccctacgctgggacgcatccca
gagtcactgtgtatcatatcaaaacatgcatggtttagtacatttatagcaatcttggag
atactcgaggtgagatatcgcgcatcaatggaggagattcacaactttttggcagctgcc
cttctctctgccattcctgcaccaggtgacacctttacagtctatatatacaacaaccca
tttatatctgcatcctcttcatcatcatcatctacatcgaccactacatcaccttcagca
accactatcacaggtacacgcgatcgtagtctgtcaacacctaatcttaccatttcaact
ggtggtgctggggatccccaccatcaatctgataagagttctcaaccattacctgtatca
tatcaattaaagagacctttggcaactgataaatcatcgttgcacgacggaacattatta
ccattgatagagtcattgacatcacaaaagattctatcattgtttatatctctgttgttt
gagcgacgtataatcatctactcggagaatatcagtcgcgtgagcaagtttgtcaatgcg
gccgtctcgatgatcgatccatttgtttggcaacatatattcatccccattcttcctcgt
tctctattagactatgtcacggcaccgatgccatttatcattggtatccattcatcactg
tttccattgattcgtaaaaagccactctctgaaatcatctatgtcgacttggacaaggat
cacgtccttcctctaccagaagatatagcattgtttcctcctcaacttttacaaccttta
aaagtttgtttagatttacaaattgctgattttaaaaaaaacaaacattatgataacaaa
gtaatagttgatacatttagaaagttttttgttactattatgggtacctatagaagattc
tttttaaaggatttagataaaagaaaatcaatttttgataaggcatcatttattgattct
caaattattaatcctgcaaagttttttacaacattttgttcatcacaaatgtttgaaaga
tttatagcagaacgtgaagaatattttttcaagggaattacaccaccaggatcatttgaa
aaagaggttattctttatgatttaaagcatccagtaactgcatcgatcaataatacattg
aaaaacaaggaaaaggaaaaagaaaaagagcgtgaaaaggagagattggaaaaggaacgt
gcaaaatccgttgccaaggcaaatgcttacaagacggtactcgatccaaagagattgagt
gttttaaatccaccaaaatcaaacggtcttagtgtagatcgttcattcttgtcatcactc
attggaaccaataataatagcagtgcgactgtgggatcactcacagttgtaaacacgagt
acaccatctacatcaccatcactaccacgtgctgcgtcacctacaatgacacggtctacc
acgatgggtagtatatcgtcaaaggcacaaaccatgactgctctagaggttggttcactt
gctcctctaaccgatgttcaattaccaatccctgctcatattcaacaacaacaacaacaa
cagaaattacaacaacaacaacaactattacaacaacaacaaacatcagaacaacaagga
ggagtatcattaccaaaaccaaaatcacataccaaccttgcttcattggcttcaaatatt
gtacaaaacgcagctagtattacaaagtcaacatcagcttcatttacattgggacatggt
caatcgttgttaccaccaaatccaactcttccctctggtaatcaatcgttgtcgtctgcc
actcacactggtggatctcatagcagaactctttcagatgttggaaatatcattctatct
gtaacaaagaaatctacccaaatattgtctagtggcactacacaaccaacaaaaccaata
gcatccgatcaaactctaaatagtaataatgttaatactgcagcaacaagcaatgttatc
ccacctactactactgctgctgctaatactactactaccaacaatactgtacaaattata
caaacacatccaaattctcctactcgtatgggtattggacaccgatctttaccatttaca
ttgattcatcaaaagttctcaccaaacgatccaactagaatgaccattgaagatatattt
aatttattctatccaggacagaaaccaagcaatggaacaacaacacctgtcgtcacccca
caccaaccagtgaccagcacaagtggtatgaaaaaatcaacgtcacaagaaaagaatata
ttcaagattccagagttgcccgataatatatccatccccttgtcaatcaacaagacaaat
aagaatcaatttatgacacaggctagtggaagtgcaggcaatatcaacacccagcacgct
acaaacaccaactctggcatccaattgacggccagtgcaccagccaatccaaccatcatt
tcatcatcctacgctgtttccgataaatccacccttccaccccctcccattagcgctcac
tctattcttcatcgaagaacacatcagagatctgtatctgaaaaggagttattggaagct
gaaaaggaacaattattattacaacaacaacaaattcaacaagttcaacaagtacaagtt
caacagcaacctatggttgtggctgcaggaggaggaggaatccaacaaccacaaccatca
ttaagattatcatcatcatctgtaccaaaaccaattactacgtcatcacaacttgaacaa
caacaacaacaacaacaacatttacaaccaatagtagaaaatgttttacaacaacaacaa
caacaacaagaacacaatggattaccacctttgacaagtactgtacaattaccaatacct
gtagccaatgtagatcataatccattaccaccattgaatactggtgcacctgtggttgta
gatttaaatacctctggatcatcattgattcatcgtagtggaggcaccccaatgatgtgt
cgtacgatgagtagcaacaactttttcgataataaccctctctcgaccaacattgagacg
tcaccagccgtagtgttggcatcgagtactgctagctgctcgagtagcaacagcaacttt
ttcaatgaatgttcattgttgggtgtgccatcttcgttgccacacattgcaggctcgaca
cccctttcaacagcaacatcatctgttgcagcactcagcagcacctcttcgttgaatagt
tcctatggatcatttacatcggcagtcttaaacaatagtaatatattatcggcatcgggt
atgatgatgatgccaccatcagctgcaatgatatcagcagctgctgctgctcaacaagga
caacaacaacaacatacacaaccacaacaacaacaacaaccacaacaaccacaacaacaa
caagtttctgttcctgtttcatctacaccagttgttccagtgtcagcagcagtagcatca
ggaggaggagtcccatctcaacaacaacaacaacaacaacaacaacaaccaaataacaac
catagtaatgcttcatctttttcatccaatcaaaatgttgttacttcttcaaccagcaat
gttttaccacctcttattccacatggaggtagtactacttctttgttgcctcctcccgcc
tcactccacagcaaccactttttcgatcaatcacctcttagccaatcatcgtttgttgat
tttggacctccagctccatccctccccggtctcaataataatagtaacggaccatataat
caaatgttggcatcatccactccaccaacctatactcaaccccaacaagtacaaccacaa
caacaaccaccggttcaacaaggagaaaatgtatctctagagagagaaatggttaaagca
aatataaaggaatgtctaaagaatgaagacacagcaattccattggaactggatttaaat
tcattgaaattgaataaatttccaagtgaattgaaaaaggaaatatatagagacaagaag
aaactggtcaaagcaatgataaagaaacttgatgtcagtatcaacaaactcaacgatttc
aaatgggacttgtcatctagttttgaccaattggactatctaaatttgtcggggaatcca
ttgtcatcgttgatgacgattgggttacctggatccgtctatctcaagactatcaccaag
attgatgtatgtggatgcaaattattacgtgttggacaaaacgatctcagacaattgacc
aatcttgctcaactcaatctctccaacaatgagattggcgagattcatccagaggcattg
agctgtcttgcccaactcgaggacctcaatgtcagtggtaactcgtctctcaaggccatt
ccagaggctgttttaaagtgccgtcaaatcactcatttggatgtcagcgggtgttcaatc
aatgaactgccacatgacctctctcccctcgccaaaatgctcgaactcaaccttggaaat
aataatatcagcgagattccagattcgatcagtctcctcgtttttctttgtcgcatcaat
ctccaagacaacaacatccgcaatcttccactgtcaattggaaaatgtagaggcattgta
tcccaaatgaacggtatcatccttcacggcaatccattggatgctgaaatcaaacaattg
tacaatgaaaatccagcaaagttggcagcctatctcgaaagaagatatcaactacaaggt
ggtgacacactaaactttaaattggcagctcaatataaacatcaacaacaacaaccagca
gcagcaacgccaacaaaatcatcaccacccttgtacccacaatctccaccaaatacagga
tacccaattgctactactacctctaccaccacttcttccaatcaagccaattcagcagct
tcatcactacaatcaaatactccaactacatcagtactatcaacgagtaatggtagttca
atggcttcatcacctcgatcctacaaattatcagtatcaaatgaagcatggagagaattg
ccaaatcacattcctggtccaaaacacaatcttggtggtggtggatcatctgcttcttct
tcccccatttcctcatctcccatgacaaatcctttaagactctcccaacaatatcaacaa
caacaaccaccaccatcaccactacaccatagtgctggtggtattagaactcaatttcaa
ttttccgactccccatcatcgtcaccctctactccatcacctttatcatcatcacctcaa
tttatgacgcaacaacaacaacaacatccagaagacccaaccgttacaatgatgaaagag
aatatttatggaatgattaaaaatgaatttagacaaaacattacatcaatctatgaaaaa
gtaaacaaatcatcaaatgtcaaagaactaattcaatttgctacaattgttagatctatc
caatctgaattggatgatattggaaagattctggcatataaaaagatttatttaccaaat
attgaaaaaaacattggaagtaatgctagtgaaaccgaaaaattcaatcaattgaaacaa
cttgttaaatcaaagattgaaatatgtgtaatttattcaaaacatacaatagaacatgtt
gatattcaacatagtatgtctgacctatcttttgtctatagagttattaaatcattatca
aataaattgactttataa
DBGET
integrated database retrieval system
