KEGG   Cavenderia fasciculata (cellular slime mold): DFA_07560
Entry
DFA_07560         CDS       T02668                                 
Name
(RefSeq) putative DNA polymerase epsilon subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03030  DNA replication
dfa03410  Base excision repair
dfa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DFA_07560
   03410 Base excision repair
    DFA_07560
   03420 Nucleotide excision repair
    DFA_07560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dfa03032]
    DFA_07560
   03400 DNA repair and recombination proteins [BR:dfa03400]
    DFA_07560
Enzymes [BR:dfa01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DFA_07560
DNA replication proteins [BR:dfa03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    DFA_07560
DNA repair and recombination proteins [BR:dfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      DFA_07560
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 NAPRTase_C
Other DBs
NCBI-GeneID: 14871914
NCBI-ProteinID: XP_004367419
UniProt: F4PWS2
LinkDB
Position
Unknown
AA seq 2328 aa
MGYSSKQQGNGNAAKDSSYYSNRAMYKKADDSDESDDDSDLEVIFDDDDLATVSSSTQQQ
QQTSKIDVDEDDEWVKIRHGWLININPSSTRDKETGVDKASLELVFIQDDATAFREWIIY
NPYFYIFVKEGHQSEVESYLKRKYENKIAGIEACEKEDLDLENHLSGIKKVYLKIRFFNV
QTLMEIRNELIPIIKKNKIRVSTTEAYEDPYSKYNSISSMSGTSSHNSKKQHHQLKSATE
YIMDMRESDVTYYQRGAIDLEIRVGLWYEITKESPTMPTTVRVLHERVDRPDPRVLAFDI
ETTHLPLKFSNAEYDEIMMISYMVDRQGFLITNRSIVSADVGDFEYTPKPEYEGPFQVFN
EPNERDLLVKFFSHVRQIRPHIFVTYNGDSFDWPFIEARALVHGLDMFREIGVRNKQDEY
RGRTAVHMDAFYWVKRDSYLPHGSHRLKEVIRKKLRYNPVEIDAEEMITAARDDPETLAN
YSVSDTVGTYYLYMTYVHPFIFSLCNIIPYNPEDVLRKGSGSLCEALLMTEAFRVNVIYP
NKHIEDNRKFYKGHLLETETYVGGHVECLECGIFRYDVPTQFNLDVNALNEHIKNIDRIL
NQAMKEAELTDKNDIVNYESIRQDILDRLTHLRNEPNSMSNPLIYHLDVSAMYPNIILTN
RLQPTSMVSEEYCATCVYNKPESNCQRTLNWQWRGDYIPATSSEYKLILQQLEYENHVFN
GEQKSFNDLPNEEQNILLKKRLKEYSRKVYKKNHIVSSEIRSDTVCMRENSFYVDTVKLF
RDRRYEYKALHSEWKNNLDQSQKGASGSHDYQKCVGMVVMYESMQLAHKCILNSFYGYVM
RKGSRWYSMEMAGIVTHTGSNIIKNARESVEQLGRPLELDTDGIWCILPERFPEEFAFKT
KGGKTKKFNFLNVLLNDKVAESFTNHQYQEYDPITKTYTIRNECSIQFESDGPYGCMFIP
TGKEKDVKLKKRYVVFNKQGGICELKGFEVKRRGELELIKSFQTELFQYFMKGDSLESCY
NAIATTANRWLDLLDSHADGYEEDELIRLITESSKMSRKLTEYEGQKSSAIGTARKMCEF
LGDEIVKDAGLFTSYIISCKPHGAPVTERTIPVEIFKTDEDKRAFFLKKWTNGYSQLKDI
IDWDYYRQRLSGVIQKMITIPAALQNVSNPVPRVIHPDWILKELKKQTELRKQTSITSFF
SAQKPGEADTGAAAGEVDMESMFDKRFAHLPKPVFTKHKKRAKIQVIDSDDEDHQPKDKD
DDDNDDDDDDEEDEQVQLKSKKKIKQQSITDFFKKGDSTVDATSAAARPTISKAPKMEDN
FSGWLSCKKKEWRKLRERIKAKKLGRFTGEENRVGHLAQQFSTQNEAVKKGLWQVISIEP
SGAVGVFIFWSLIGDMIVPIKVQVNRVFYINSFSEEPPLEGAKKVLVAPPRSKERLYLTR
NSMSEEDYITQSRSISNIFTDPDTEGVYETKVELDQRAIIQVGCVAAMVRADLKTVHNNN
TKYQLEDIQNRPDKQQSYLAQQNFHTIYVYANAKKDGKDGVYAIFYSHNHTATIIYANPY
TSHNISDKLLNSLSEKHPNVKFSLEIGKSIDGAKKLVNAQLQVYIGARRGATIVITQCSE
FMKRDIPALREFPKVAMPYHDQDSNYSPFNWEVHCIKPIATRYEEVDKWWMHYVGMARYS
NIPIGNLVGGDYAQMVTDTEFSRLLTDSSHLLWMSYSNSPDLGGTEEDDAKFHEELPKIE
INQPDSYSTVCFELDLANLAVNTILESAHLADIEGIIGGELNNGDPTIFTQASQLQHQQQ
QQQQTPTQAPSRLNNKQMTHLNSCDKEFNILRKLVTKWSLDLVMGNKRAHQYPSILLTHF
YRWISSPYSGLYDPILHRTLHGLMKKVFLQLVFEFKKLGAKIIYGNFNKLIICTQKQTVE
DAKAYCQYILAVIKKKELFSWLNIKPVKCWHNLLWMDSSNYSGVSVEEEKDQEQEEEEEE
LEGSTEKRRNHSPDTIDGKLESHWNISDFLPQSLQTSFLLVISDYIRKLHIYSQTIDKEM
ERMVSSSDKKEKEKEKDQTNQDDHNNNNGTIDVDQPSSSSQQKEPSKNPSQDQWNEIEKE
KFQPFKWEKVVDCNRIFQMVQSLRVSDHSDAIHLFPSLPGSHLSMTNPSLEFVKFVCHTL
SLDRSLYSNVQRLRKNLMKMINIREFSDEAKFNDPCLSFVMPDVICPTCYNCRDLDLLRE
DHSSTDGTSKLACSACHNPYNRSLIESVLVETVQRRSLSYHLQDFKCQKCGQIKADNLSE
ICATCSGQWQCRLNSSDFNRDLTIFKNIAKYYQFEWLLEIVQDLTNLH
NT seq 6987 nt   +upstreamnt  +downstreamnt
atgggatactcgtctaaacagcaaggcaatggcaatgctgccaaagactctagttattat
agtaatagagcaatgtataaaaaggctgatgattctgatgaaagtgacgatgacagcgat
ttggaggttatctttgacgacgatgatctagctactgtatcatcatcaacacaacaacaa
caacaaacctcaaagatagatgtagatgaagatgatgaatgggtcaaaattagacatggt
tggctcatcaacataaatccaagttcgacacgcgacaaagaaactggagttgacaaagca
tctttggaattggttttcattcaagatgatgcaacagcatttagagaatggatcatttat
aatccatacttttatatctttgttaaagaaggacatcaatctgaagttgaatcatatcta
aagagaaagtatgaaaataagattgcaggtattgaagcttgtgaaaaagaagatttggat
ttggaaaatcatttatctggaattaaaaaagtatatttaaagattagattctttaatgtt
caaacattgatggagattagaaacgagttgataccaattattaaaaagaataagattaga
gtgtcgacgaccgaggcctacgaagacccatactccaagtacaatagtatatcgtccatg
tcgggtacgagcagtcataatagcaagaaacaacatcaccagctaaaatcggcaaccgag
tatattatggatatgcgtgagagcgatgttacctactaccaacgtggcgccatcgacttg
gagatccgtgtcggtctgtggtatgaaatcaccaaagagtcgccaactatgcccacgacg
gtacgagtgttgcacgaacgtgtcgaccgtcccgacccacgtgttttggcgtttgatatc
gagacgacgcatttgccactcaagttttcaaacgccgagtatgacgagattatgatgatc
tcgtatatggtcgatcgccagggtttcctcatcaccaacaggtcgattgtgagtgccgat
gttggtgactttgagtacacacccaaaccagagtacgagggtccgttccaggtgtttaac
gagccgaatgaacgtgacttgctggtcaagttcttttcgcatgtgcgtcagatccgtcca
cacatctttgtgacatacaatggtgacagtttcgattggccgtttatcgaagcacgtgca
ctcgtccacggactggacatgttccgcgagattggcgtgcgcaacaagcaagacgagtac
cgcggtcgtacagccgtccacatggacgccttttactgggtcaagcgtgactcgtacctc
ccccacggctcacatcgtctcaaagaggttatccgaaagaaactgcgttacaacccagtc
gagattgacgccgaagagatgatcacggcggcacgcgacgaccccgagacacttgccaac
tactctgtctctgacacggtcggtacctactacttgtacatgacctatgtccatccattc
atcttttcgctctgtaacatcatcccctacaaccccgaagatgtgctccgtaaagggtcc
ggctcgctatgtgaggcactgctcatgactgaagcattccgtgtcaatgtcatctacccc
aacaaacatatcgaagacaatcgcaagttttacaaaggtcatttactagagactgagacc
tatgtcggtggtcacgtcgaatgtcttgaatgtggtattttccgatacgacgttccaact
caattcaatctcgatgtcaacgcactcaacgaacacattaaaaacattgaccgtattctc
aaccaagccatgaaggaagctgaactcaccgacaagaatgatattgtcaattatgaatcc
attcgtcaagatattctcgatcgtctcactcatctccgaaacgaacctaattcaatgagt
aatccactcatctaccatcttgatgtatctgccatgtatccaaatattatcctaaccaat
cgtcttcaacctaccagtatggtaagtgaagaatattgtgccacctgtgtttataacaaa
cctgaaagtaattgtcaaagaacattaaattggcaatggagaggagattatattccagca
acatcaagtgaatataaattaattttacaacaattggaatatgagaatcatgttttcaat
ggtgaacaaaaatcatttaatgatttaccaaatgaagaacaaaatatattattaaaaaag
agattaaaagaatattcaagaaaagtatataaaaaaaatcatatagtttcaagtgaaatt
agatcagatacagtttgtatgagagagaattcattctatgtagatactgttaaattattt
agagatcgtcggtatgaatacaaggcgttgcatagtgaatggaaaaataatttggatcaa
tctcaaaagggtgcaagtggtagtcacgactaccagaaatgtgttggtatggtggtcatg
tacgaatcgatgcaacttgctcacaagtgtattctcaattctttctatggttacgtaatg
agaaagggttcgagatggtattcaatggagatggccggtatcgtaacacacactggttca
aacattatcaagaatgctcgtgaatctgtcgaacaattgggtagacctcttgaattggat
accgatggtatttggtgtatcttgccagaacgattcccagaagagtttgctttcaaaacc
aaaggaggtaaaactaaaaagtttaatttcctcaacgttcttttgaatgacaaggttgcc
gaatcttttaccaatcatcaataccaagaatatgaccccatcacaaaaacctataccatt
cgtaatgaatgtagtattcaatttgaatctgatggtccttatggttgtatgtttattcct
actggtaaagaaaaagatgtaaagttaaaaaagagatatgtagtatttaacaaacaagga
ggaatttgtgaacttaaaggttttgaagttaaaagaagaggagagttggaattaattaaa
tcattccaaacagagttgttccaatatttcatgaagggtgatagtttggaatcatgttac
aatgctattgcaaccactgctaatcgttggcttgatctattggacagtcatgccgatgga
tacgaagaagacgagttgattagattaattacagagagtagcaagatgagtagaaaactc
acagaatacgaaggtcaaaagagtagtgccattggtactgctcgtaaaatgtgtgaattc
cttggtgatgaaattgttaaagatgctggtttatttacaagttatattatttcttgtaaa
ccacatggagcaccagtaacagaaagaacaattccagttgaaatctttaaaactgatgaa
gataaaagagcgtttttcctcaagaaatggactaatgggtatagtcaactaaaggatatt
atcgattgggactattatcgtcaacgtctaagtggtgtcattcaaaagatgattaccatt
cctgctgcactccaaaatgtttccaaccctgttccacgtgttatccatcccgactggatt
ttaaaggaactaaaaaaacagacagagttgcgtaaacaaacatccatcacatctttcttt
tctgcacagaaaccaggagaggcggatactggtgctgcagcaggagaggtggatatggaa
tcgatgtttgacaagagattcgcacatcttccaaagccagtctttaccaagcacaaaaag
agagcaaagattcaagtcattgattcagatgatgaagatcatcaaccaaaggataaggat
gatgatgacaatgatgatgatgatgatgatgaagaggacgagcaagttcaattgaaatca
aagaaaaagataaagcaacaatccattacagactttttcaaaaagggtgattctacggtt
gacgcgacctctgctgccgcaagaccaaccatttcaaaggcaccaaagatggaagataat
ttcagtggatggttatcttgtaaaaagaaagagtggagaaagttaagagaacgaatcaaa
gcaaagaagttgggtcgatttacaggcgaagaaaaccgtgttggacacttggcacaacaa
ttctctacgcaaaacgaagcagtcaagaagggattgtggcaagtcatttcgattgaaccg
agtggagcagttggcgtgtttatcttttggtctttgattggagacatgattgttccaatc
aaggtgcaggtcaacagagtgttttacatcaacagctttagtgaggaaccacctcttgaa
ggcgccaaaaaggtgttggtagcaccaccacgttccaaagagagattgtatctgacacgt
aattccatgtctgaagaagactatatcacacagtctagatcgatcagcaacatctttaca
gaccccgacacagagggtgtctatgagaccaaggtggaactcgatcaacgtgccatcatc
caagttggttgtgtcgctgcaatggtgcgagctgacctcaagactgtccacaacaacaac
accaagtatcaactcgaagatatccaaaatcgaccagacaagcaacaaagctatttggct
caacaaaacttccacaccatctatgtctatgccaacgccaaaaaggatggtaaagatggt
gtctatgctatattctactcgcacaatcatactgccaccatcatctatgccaacccgtac
actagccacaatatcagtgacaagctactcaactcactctctgaaaaacatccaaacgtt
aaattctcattagagattggaaagtcgattgatggggccaagaaattggtcaatgcacag
ctgcaagtttatattggtgctcgtagaggtgctaccattgttattacccagtgctcagag
tttatgaaacgcgacattccagcattgcgagagttccccaaggtggccatgccataccac
gaccaagactccaactactcgccattcaattgggaggtgcattgcatcaagccaattgcc
acgagatacgaagaggttgataaatggtggatgcattatgtcggtatggcccgttactcc
aacattccaattggcaatcttgtaggtggcgactatgcccaaatggtcactgacaccgag
ttttcgagactgttgaccgactcgagtcacctactctggatgtcctactccaactctccc
gaccttggaggaactgaagaagacgatgctaaattccacgaggaactacccaagattgaa
atcaatcaacccgactcttacagcaccgtttgctttgaactcgatcttgccaatctggca
gtcaacactatcctcgagtctgctcatcttgccgacattgaaggtatcattggaggtgaa
ctaaataatggtgacccaactatattcacccaagcatcacaactgcaacaccagcagcag
caacaacagcaaacaccaacacaggccccgtcaagactcaacaacaaacaaatgacacat
ctcaacagctgtgacaaggaatttaacattcttagaaagttagtgaccaagtggtcattg
gatctcgtcatgggcaacaaacgtgctcaccaatacccatccatcctattgacccacttt
tacagatggattagttcaccctactctggactctacgatcccatcctacatcgtacactc
cacggtctcatgaaaaaggtgttccttcaattggtgtttgaattcaagaaactaggtgct
aaaatcatctatggcaactttaacaaattaatcatttgtactcaaaaacaaacggtcgaa
gatgcaaaggcctactgccaatacattctagctgtcatcaaaaagaaagaactcttttct
tggttaaacatcaaaccagttaaatgttggcacaatcttttatggatggatagcagtaac
tattctggtgtatcagttgaagaagaaaaggatcaagaacaagaagaggaagaagaagaa
ttagaaggttccacagagaaaagaagaaatcactcccccgacactattgacggtaaattg
gaatcacattggaatatttcagatttcctaccacagtcactccaaacctctttcttgctt
gtcatctctgattacattcgtaaacttcatatttattctcaaactattgacaaggaaatg
gaaagaatggtttcttcatctgataaaaaggaaaaggaaaaggaaaaggatcaaaccaat
caagatgatcataataataataatggcacaattgatgttgatcaaccatcatcatcatct
caacaaaaagaaccatcaaagaatccatcacaagatcaatggaatgaaattgaaaaagag
aaattccaaccattcaaatgggaaaaggttgtcgattgtaatagaatcttccaaatggtt
caaagtctaagagtatcggatcacagtgatgctatacatcttttcccaagcttgccaggc
agtcatttgagtatgaccaatccatcactcgagtttgtcaagtttgtatgtcacactctg
tcactcgatcgttcactctactctaatgtccaaagactccgtaaaaacttgatgaagatg
atcaatatcagagaattctctgatgaagccaaattcaatgatccttgtctctcgtttgtc
atgccagatgtcatctgtccaacctgttacaattgccgtgatttggatcttttacgtgaa
gatcattcttctaccgacggtaccagcaagcttgcatgttcagcttgtcacaatccatac
aatagatcacttatcgaaagtgtcctcgtcgagactgtccaacgtcgtagtctttcttat
catttacaagatttcaagtgccagaaatgtggtcaaatcaaagctgacaatctttccgaa
atatgtgctacctgctctggtcaatggcaatgtcgtctaaatagttctgattttaataga
gatttaacaatctttaaaaatatagcaaaatactatcaatttgaatggttattggaaatt
gtacaagatctaactaatttacattaa

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