Cavenderia fasciculata (cellular slime mold): DFA_07628
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Entry
DFA_07628 CDS
T02668
Symbol
polA
Name
(RefSeq) mitochondrial DNA polymerase A
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03030
DNA replication
dfa03410
Base excision repair
dfa03420
Nucleotide excision repair
dfa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DFA_07628 (polA)
03410 Base excision repair
DFA_07628 (polA)
03420 Nucleotide excision repair
DFA_07628 (polA)
03440 Homologous recombination
DFA_07628 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfa03032
]
DFA_07628 (polA)
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_07628 (polA)
Enzymes [BR:
dfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DFA_07628 (polA)
DNA replication proteins [BR:
dfa03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
DFA_07628 (polA)
DNA repair and recombination proteins [BR:
dfa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
DFA_07628 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DFA_07628 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
CAP
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
14869918
NCBI-ProteinID:
XP_004355124
UniProt:
F4Q2H1
LinkDB
All DBs
Position
Unknown
AA seq
1855 aa
AA seq
DB search
MKLNIKSLGLVLILIINQSYGQTVSFDATYQLSLVNAIRAQAGKAALSLSPCLVQSAQFQ
SNYQANSNQMTHDNPAGDALVRMSSFTANSLTSAGENVAAGYYNDDDVVAAWRQSPGHYA
NMIGDFLYFGCGMAASSTNQVVYWTQNFAIYSSCSSQTTGGSTSTTSSTSATGTSSTTTS
PTSATSSTTTGATSDPITSTSATTTDSISTTGPGVTSTTTGSVTSATGTSSTTTSPTSAT
SSTTGATSDPITSTSATTGSLSTDQSTTTTTTIAADTTTQGSTTTGTGTTSDPISTTSGT
STSSSSSSSEDPIISTTGSTTGSSSADQPTTSSDSTTTPDDSTTTSDEDSSSATKMGSSA
EKSGSNTDTDSSTSIESSGSTDDNVDSNSASVDSSSIDSSSSSSSTTNNDSNSDSSTLGS
SNNDDQNADSQQRGTSSAETAGSLDNNNMGEDGGNSSMGAQLYKPYMIIATLMIVSVGVR
FIVIVQPTSLSITNQHHRLYCTNNNNDNNSSSNKTTPRKYTIKGNLISSSSLSNSIPPSV
DNSEPTATTTTKKKKVVNIRIKSKDPFIDIGGNNKVYLRKPKNTTTPVLDTTQLNIDNNN
NTDNLQQVNSSSIITDLLEIENNNPRNLKSIEEDISLSTSPQPLSSSPSSFISASESSNS
IEPIKEEQQVIGQQQQEEEEMKNSILRLKEINISQDFKATPTQVAEAQQKKKAAIAKSKR
KKDEDKDDFIDDSEELMEQLDDDITTSTLTTSSTTTTTNNNKNEEKQKLNLDQNNNHVVI
IDGTPLAYKAYNTISGLTHNGEPIGALFGFTKALLKILKELKPDYVLVCFDPTDGAGNFR
HDIYEKYKANRPSTPLDLKQQLPLLPQVCTALGIEYAKQSRFESDDLIATYANIVEQANK
KLAAGNDNLVVDGQQQQQQKYRATIVSDDKDMLQLVSDDVHIYNTRTNSIFCHQDVIDKM
GVPSHLITSFQALAGDSVDNIPGVPSLGPKSASAIINSLGHIDNVLANIEQIPLKFREKV
RNNSEQIKISYQLATLSKQAETKVPLEGLKWNPVNKLQFVEFLDKYNFNNIKGKLDNLGL
VYEGEENKEISQSSSSSSSSSSAYTIDPDYVLTDEEVKDYLPNDVTCVNTVEHAREIDVY
HACDTEVIDIDVKEQSPIGHGKIICFSIYCGPDIDFGTGSRIWVDILGSNGDEILQIFKE
YFEDESIFKVWHNYAFDRHVFYNHNIDVVGFGGDTMLMARLWDASRMMRGGYSLEGLTKD
LLDKHKTNMDDLFGQPKLKSDGTPGKGIILPPLEHLQRSSKHLTKWIEYSSRDAEVTWML
RENLHKKLMTMEWIGPNSNMWDFYYMMWRPFGQLLTDMERRGMKVDLEHLKGVEVIAQRD
ITEHNENFRRWALGYCENVKHMNIDSDAQVQQFLFAPCRNVKTKEEMAREEEFERENVDG
IIEEGAKKAKKKIGFKLAGLGLPVPGVTNSGWPSVDAASLRLLSGKDPANGKYGTAYNHF
AVDRLPPNATEEEIEKAKEEGRQACLAIASLLEVGSIGTLISSFIIPLQRLADSNHRLHT
SVNVNTETGRLSSRRPNLQNQPALEKDRYKIRKAFTCEPGNTLVVADYGQLELRLLGHIT
NCKSMLDAFRVGGDFHSRTAMGMYPHVRAAVDAGEVLLEWDGEGAPPKPLLKDKFASERR
KAKTLNFSIAYGKTAHGLSKDWNVTLSEAQNTLNRWYEDRPEVLLWQRSTIQIAHQKKWT
RTLMGRYRLLPDIDSKARGFVGHSERASINTPLQGGAADIVMKAMLIIEQDARLKELGYR
LIMQIHDELILEGPEEHAPEARDIVIKLMGNPLNKPLLVDLVVDCRFAKTWYEAK
NT seq
5568 nt
NT seq
+upstream
nt +downstream
nt
atgaagttaaatatcaaatcattaggattggtcctgattttaattattaatcaatcatat
ggacaaactgtatcatttgacgctacctatcagttatctttggtcaatgcgattagagcc
caggctggtaaagcagctctatcattaagcccttgtcttgtacaatctgcacaattccaa
tcaaactaccaagccaattccaatcaaatgactcatgataacccagctggtgatgccctg
gtaagaatgagttcttttactgccaattcactcacttctgcaggagaaaatgttgcagct
ggatactataatgacgatgatgttgttgctgcttggagacaatcgccaggacattatgca
aatatgattggagattttctatattttggttgtggaatggctgcttcgagtaccaaccaa
gtggtgtactggacccaaaattttgcaatctattcatcttgtagctctcaaaccactggc
ggttcgacatcaactacgtcttcaacctctgcaactgggacatcttcaacaaccacttct
cccactagcgcaacttctagtactactactggagcaacttctgatccaatcacatcaacc
tctgctaccacaactgattctatttccactactggacctggagtaacctccacaacaact
ggctctgtcacctctgcaactgggacatcttcaacaaccacttctcccactagtgcaact
tctagtactactggagcaacttctgatccaatcacatcaacctctgctacaaccggatct
ttatcaacagaccaatccaccaccactactactactatcgccgctgacactaccacccaa
ggttcaaccacgactggaactgggacaacatctgatccaatctctactactagtggtaca
tctacttcttcttcttcttcttcttccgaggatccaatcatatcaacaacgggatctacc
actggatcttcgtcagccgatcaaccgaccacatctagtgattctacgaccacacctgat
gactctacgactacatctgatgaagatagcagctcggccaccaagatgggttcttcagct
gagaagagtggcagtaatacagatacagactcgagcacatctattgaatctagtggcagc
actgatgacaatgtcgatagtaattctgcttctgtcgatagtagcagtattgattcatca
tcatcatcatcatcaacaaccaacaatgacagcaacagcgatagtagtactttgggaagt
agcaataatgatgaccaaaatgcagacagccaacagagaggaacatcatctgccgaaaca
gcaggcagcttggataataataatatgggtgaagatggtggtaactcttcgatgggagca
cagttgtacaaaccatatatgatcattgcaactttaatgatcgtatctgtcggtgttcgt
tttatagtcattgttcaaccaacttcactaagtatcactaatcaacatcatagattatat
tgtacaaataacaacaacgacaacaatagtagtagtaataaaacaacaccaagaaagtat
actatcaaaggtaatttgatatcatcatcatctttatcgaattcaataccaccatcagtt
gataattcagaaccaacagcaacaacaacaacaaagaaaaagaaagtagtaaatattaga
atcaagtcaaaagacccttttatagatatcggaggtaataataaagtatacctcaggaaa
ccaaagaatactacaacaccagtactagacaccactcaactcaatatcgataataataac
aatacagataatcttcaacaagtaaatagtagtagtattattacagatttattagaaatc
gaaaataataatccaagaaatttaaaaagcatagaggaagatatttcactttccacttca
ccacagccactttcatcgtcaccatcttcatttatctctgcatcagagagtagtaatagt
attgaaccaataaaagaagaacaacaagtaattggtcaacaacagcaagaagaggaagaa
atgaaaaatagtatattgagattaaaagaaattaatatcagtcaagatttcaaagctaca
ccaacacaagtagcagaagcacaacaaaagaaaaaggctgcaattgctaaaagtaaaaga
aagaaagatgaagacaaggatgattttatagatgactctgaggagcttatggaacaacta
gatgatgacatcaccacttcaactttaactacctcatcgactacaacaacaaccaacaac
aacaagaatgaagaaaaacaaaagttaaatttggatcaaaataataatcatgttgtcatt
attgatggtacaccattggcatacaaagcatataataccatttcaggactcacacacaat
ggtgaaccaattggtgcattgtttggctttaccaaggcattactcaaaatactcaaagaa
ttgaaaccagactatgttttggtttgtttcgatccaactgatggtgccggtaattttaga
catgacatttatgaaaaatacaaagccaatagaccatccactcctttggacctcaaacaa
caattacctctattgccacaggtttgcactgctctcggaatcgaatatgccaaacaatca
agattcgaatctgatgatttgattgctacctatgccaacattgtagaacaagcaaacaaa
aagttggcagctggaaatgataatcttgttgtcgatggtcaacaacagcagcaacaaaaa
tatagagctacgatcgtatcagacgataaagacatgttgcaattggttagtgacgatgtt
catatttataatactagaacaaactctatcttttgtcatcaagatgttattgataaaatg
ggtgtcccaagtcatttaattacatcattccaagcattggctggtgattctgttgataat
attccaggtgtaccatcattgggtccaaaaagtgcaagtgctatcatcaactctcttggt
catattgataatgtactagcaaatattgaacaaattccattaaagtttagagaaaaggtt
agaaataattcagaacaaattaaaatttcttatcaattggcaacactaagtaaacaagca
gagacaaaagtacctttggaaggattaaaatggaatcctgtcaacaaacttcagtttgta
gaatttttagataaatataattttaataatattaaagggaaattggataatctaggatta
gtttacgagggagaagaaaataaggaaatttcacaatcgtcgtcatcatcatcatcatca
tcgtcagcctatactatcgatccagattatgtattgacagacgaagaggtaaaggactat
ttaccaaatgatgtgacatgtgtcaatacagtagaacatgcaagagaaattgatgtatat
catgcatgtgatactgaagtcattgacattgatgtaaaggaacaatcacctattggacat
ggaaagattatttgtttctctatttactgtggtcccgacattgattttggaacaggatca
cgtatttgggtagacattttaggaagcaatggtgatgaaatactgcaaatatttaaagaa
tactttgaagatgaatcgattttcaaagtatggcacaactatgcatttgacagacatgtt
ttctacaaccacaacattgatgttgttggatttggaggtgataccatgctgatggcacgt
ctatgggacgcctctagaatgatgcgtggtggttattcactcgaaggtctaacaaaggat
ctgttggacaaacacaaaaccaacatggacgatctatttggccaaccaaagctaaagtct
gatggtacaccaggcaaaggtatcatattaccaccactcgaacatctccaaagaagttca
aaacatttgaccaaatggattgaatactcgagtcgtgatgccgaagtgacatggatgctc
agagagaatcttcacaaaaagctcatgaccatggaatggattggtcccaattcaaacatg
tgggacttttactatatgatgtggcgaccatttggacagttgctcacagacatggaacgt
cgtggtatgaaggtagatttggagcatctcaaaggagttgaggtcattgcccaaagagat
atcaccgaacacaatgaaaactttcgtcgatgggcattgggctactgtgaaaatgtcaag
catatgaacattgacagtgatgctcaagttcaacagtttttgtttgcaccatgtcgcaat
gtaaagaccaaagaagagatggcacgcgaagaagagtttgaacgtgaaaatgtcgatggc
atcatcgaggaaggtgctaaaaaggcaaagaaaaagattggatttaaattggctggtctg
ggactcccagttccaggtgtcaccaattcaggatggccaagtgtagatgctgcctcgctt
agattactctctggcaaggatccagccaacggaaagtatggaactgcttataatcatttt
gcagttgaccgtctgcctcccaatgccaccgaagaggaaattgaaaaagccaaggaagaa
ggtcgacaggcttgtcttgctattgcttcgttgctcgaagtgggtagtatcggcacgctt
atcagctcgtttattattccactgcagcgattggccgactccaatcatagacttcacact
tcggtcaatgtcaatacggaaacaggtcgtctctcttctcgacgtcccaatctacaaaat
caaccggcactcgaaaaagatcgttacaaaatcagaaaagcatttacctgtgaacctggc
aacacattggtcgtagccgattatggacaactcgaacttcgattattgggacacatcacc
aactgcaagagtatgctcgatgcttttcgtgtcggtggcgatttccattctcgtacggct
atgggcatgtatccacatgttcgtgcagctgtagacgccggtgaagttttactagagtgg
gacggtgaaggagcaccacccaaaccactgctcaaggacaagtttgcatcggaacgtcgt
aaagccaaaacactcaatttctcgattgcctatggcaagactgctcacggtctctccaag
gattggaatgtcaccctcagtgaagcacaaaacactctcaatcgttggtacgaggatcgt
cccgaagtactcttgtggcaacgcagcaccatccaaatagcccatcaaaagaaatggact
agaacattgatgggtcgttacagactcttgcccgatatcgacagcaaggcaagaggattt
gttggacacagcgaaagagcatccatcaacacaccactacaaggtggtgcagcagacatt
gttatgaaggcaatgctcatcattgaacaagacgcaagattaaaggaacttggatatcgt
ctcatcatgcaaattcatgatgaactcattctcgaaggacccgaagaacatgcaccagaa
gcaagagatattgttatcaaattgatgggtaatcctttaaacaaacctcttttggttgat
ttggttgttgattgtcgttttgctaaaacttggtatgaagctaaataa
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integrated database retrieval system
