Cavenderia fasciculata (cellular slime mold): DFA_07833
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Entry
DFA_07833 CDS
T02668
Symbol
ctr9
Name
(RefSeq) RNA polymerase II complex component
KO
K15176
RNA polymerase-associated protein CTR9
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_07833 (ctr9)
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
DFA_07833 (ctr9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_14
TPR_19
TPR_1
TPR_16
TPR_12
TPR_17
TPR_8
TPR_11
TPR_7
TPR_CcmH_CycH
TPR_6
ANAPC3
TPR_MalT
TPR_Slam
TPR_9
TPR_10
ARM_TT21_5th
NatA_aux_su
E_motif
Rapsyn_N
Fis1_TPR_C
RNPP_C
TPR_NPHP3
DUF6584
Motif
Other DBs
NCBI-GeneID:
14868845
NCBI-ProteinID:
XP_004355328
UniProt:
F4Q3N8
LinkDB
All DBs
Position
Unknown
AA seq
1047 aa
AA seq
DB search
MTSSYNNSSSYSSSSYSSSTTTAPSSSSSSSSSSPNIYIPIRGSERYVSVSSDNLPSVKD
VIEILRGEVAPLDIWLQIAIEYYKQNHIDDFKTLLGIALDPAAEEFYKDSKFERIAMLNA
MASYYTQLGNVEKDKGKKEDYYQEATYRFTKADRIDPRQPLTFIGKAALLLAKGEVDRAA
LNFQQALSASSNTHNSNTSTTLPLFPAKLGYSCVLFNKGEINKAVESLQKLLIQNPVSAS
VRLGLGYCFYKLGKIEAAKKAFQRVLEIDLDNVDALVALATIHTNQGDIDTGMKLIVQAY
ELAPNNPIVLNQLANHFFYKGDYTKVHALAQAAMSNTDINQIKAEASYIIAKAYHATDKW
NEALQNYHQATLKSPDFYLAQFGLGQVYLHNNDYEKAVGCFEAVLEKQPENYEALQILGS
LYKVSSQSKNIEKIKNVLMKTTLLNPNDSSNWLELAQLLESSDVSSSLDAYEKGINLLKK
DGIEISTEILNNMAVLNHRKGSFSNAEKLYLKVIEASGHKLEDFKAVNITTTYNLARLYE
SMNKFDQARQLYKGIIKEHPNYMDCYLRLGAIAKSEGNSYESGEWYKEALNIDPNSPETW
SLYGALHLSNEQWNHAQKKFEQILEVVNKNDPYASIALANIYFNAKYQYPEKSEKYLSIA
ESFYSRILSRHNDNIYAANGLGMVAAAKNNLLLATEIFIQLRESAIDVSTISVNLAHVYM
SRNLFDNAIKLYEGSLKKCNNTKDMEAIYGYLSKAYFLARRYQECKQILKKAIHFSPSNL
ALWYNLALAIESQSMAILEKPNKSLPEVASVNREVVYARHLLMNLVSQKTQKPNYDVKRC
KTHLLSLTELAKKVGEELKSLEDLETENAKKRESAAVEAKKRADEREREEKEQEEAKKAK
EEEHQRMAEEYRASWNAARADKEREEKDEDYGSAKKKKRGAEESSDEEYTVDKKEKKKAK
KEKKKEKKEKRREKRDKKKKEKQQKEGKEGEEDDEEGEEKKSRDSSDQEENDQKDQEMDK
QEEQKDTSKPSDTKDDDDDLFGSGDEL
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgacaagttcatataacaactcatcatcatattcatcttcatcttattcatcatctaca
accactgctccttcttcttcttcttcttcctcatcctcatcaccaaatatttatattcca
attcgtggatctgaaagatatgtatcagtatcatctgacaatttaccaagtgtaaaggat
gtcattgaaatattaagaggtgaagttgcaccacttgacatttggttacaaatagctatt
gaatattataaacaaaatcatatagatgactttaagacattacttgggattgcattggat
ccagcagcagaagagttttacaaggattcaaagtttgaaagaatagccatgttgaatgca
atggcatcatactatacacagctgggtaatgttgaaaaggataaaggtaaaaaggaagac
tattaccaagaagcaacctatagattcacaaaggccgatcgtattgatcctcgtcagcct
ctaacttttatcggcaaggctgcactcttgttggccaagggtgaggttgatcgtgctgct
ctcaactttcaacaagctctctctgctagtagtaatactcacaattcaaatacttcaaca
actttacctcttttccctgctaaattgggttattcatgtgtattatttaataaaggagaa
attaataaagcagttgaatcattacaaaagttattgatacagaatccagtgtctgcatcg
gtccgtttgggattgggatactgtttctacaagttgggcaagatcgaggcggccaaaaag
gcattccaaagagtattggagattgatttggacaatgtagatgcgttggtggcgttggca
acaatccataccaatcaaggtgacattgacactggcatgaaacttattgttcaggcgtac
gagttggcacccaacaatccaatcgtactcaaccaattggccaaccactttttctacaag
ggtgattataccaaggtacatgccttggcacaggcagccatgtccaacactgacattaac
caaatcaaagcagaggctagttatatcattgccaaggcataccatgctactgacaagtgg
aacgaagctcttcaaaactatcatcaagcaaccctcaaatcacccgatttctacttggcc
caatttggtcttggtcaagtctaccttcacaacaacgactatgaaaaggctgtcggttgt
tttgaagcagttttggaaaaacaaccagaaaactacgaagcacttcaaatccttggtagt
ctctacaaagtatcatcacaatcgaaaaacattgaaaaaatcaaaaatgtcctaatgaaa
acaactctattaaatccaaatgattcttcaaattggttagaattggctcaattattagaa
tcttctgatgtttcttcttctcttgatgcatatgaaaaaggaattaatttattaaaaaaa
gatggaattgaaatatcaactgaaatattaaataatatggcagtattaaatcatagaaag
ggatcattttcaaatgcagagaaattgtatctcaaggtgatcgaagcatctggtcataaa
ttggaggatttcaaggctgttaatatcaccacgacctataatcttgctagattgtacgaa
tcgatgaataaatttgatcaggctcgtcaactgtacaagggaatcatcaaggaacatccc
aactatatggattgttatcttagacttggtgccattgccaagagtgaaggcaacagctat
gaaagtggagaatggtacaaggaagcactcaacattgaccccaactcgccagagacttgg
tcactctatggtgcactccacctctccaacgagcaatggaatcatgctcagaaaaagttt
gaacaaatcctcgaggttgtcaacaagaatgatccatatgccagtattgcattggccaat
atctatttcaacgccaagtatcagtaccctgaaaagtcggaaaagtatctctctattgct
gaatcattctactctagaatcttgtctcgtcacaatgacaatatctatgctgccaatggt
ttgggtatggtcgctgccgccaaaaacaatctcctccttgcaactgaaatctttattcaa
cttcgtgaatctgctatcgatgtttcaaccatatcagttaatttggctcatgtttacatg
tctagaaatttatttgataatgctattaaattgtatgaaggaagtttaaaaaaatgtaat
aatactaaagatatggaagcaatttatggatatttatcaaaagcatatttcttggcacgt
cgttatcaagaatgtaaacaaatattgaaaaaggcaattcatttttcaccatcgaatctt
gcactttggtacaacttggcattggccattgaatctcaatcgatggccattttggagaaa
ccaaacaaatctcttccagaggttgcaagtgtcaatagagaggttgtatatgctcgtcat
ttattgatgaatcttgtctctcaaaaaactcaaaaaccaaattacgatgttaaaagatgt
aaaactcatttattatctttgactgaattggcaaaaaaggtaggagaggaattaaaatca
ttggaagatttggaaactgaaaatgctaaaaagagagagagtgctgcggttgaggctaaa
aagagagccgatgaaagagaaagagaggaaaaggaacaagaagaggccaaaaaggcaaag
gaggaagaacatcaacgtatggccgaggaatatcgtgccagttggaatgccgccagagca
gacaaggaaagagaagaaaaagatgaagactatggaagtgccaaaaagaaaaagagaggt
gccgaagaatcaagtgacgaagaatacactgtcgataaaaaggagaaaaagaaggccaaa
aaggagaaaaagaaagaaaagaaggaaaaacgaagagaaaaaagagataaaaagaaaaaa
gaaaaacaacaaaaggaaggaaaggaaggagaagaagatgatgaagaaggagaagaaaag
aaatctagagattcaagtgatcaagaagaaaatgatcaaaaggatcaagaaatggataaa
caagaagaacaaaaagatacaagtaaaccatctgatacaaaggatgatgatgatgattta
tttggtagtggtgatgaactttaa
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