KEGG   Cavenderia fasciculata (cellular slime mold): DFA_07833
Entry
DFA_07833         CDS       T02668                                 
Symbol
ctr9
Name
(RefSeq) RNA polymerase II complex component
  KO
K15176  RNA polymerase-associated protein CTR9
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dfa03021]
    DFA_07833 (ctr9)
Transcription machinery [BR:dfa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    PAF1 complex
     DFA_07833 (ctr9)
SSDB
Motif
Pfam: TPR_2 TPR_14 TPR_19 TPR_1 TPR_16 TPR_12 TPR_17 TPR_8 TPR_11 TPR_7 TPR_CcmH_CycH TPR_6 ANAPC3 TPR_MalT TPR_Slam TPR_9 TPR_10 ARM_TT21_5th NatA_aux_su E_motif Rapsyn_N Fis1_TPR_C RNPP_C TPR_NPHP3 DUF6584
Other DBs
NCBI-GeneID: 14868845
NCBI-ProteinID: XP_004355328
UniProt: F4Q3N8
LinkDB
Position
Unknown
AA seq 1047 aa
MTSSYNNSSSYSSSSYSSSTTTAPSSSSSSSSSSPNIYIPIRGSERYVSVSSDNLPSVKD
VIEILRGEVAPLDIWLQIAIEYYKQNHIDDFKTLLGIALDPAAEEFYKDSKFERIAMLNA
MASYYTQLGNVEKDKGKKEDYYQEATYRFTKADRIDPRQPLTFIGKAALLLAKGEVDRAA
LNFQQALSASSNTHNSNTSTTLPLFPAKLGYSCVLFNKGEINKAVESLQKLLIQNPVSAS
VRLGLGYCFYKLGKIEAAKKAFQRVLEIDLDNVDALVALATIHTNQGDIDTGMKLIVQAY
ELAPNNPIVLNQLANHFFYKGDYTKVHALAQAAMSNTDINQIKAEASYIIAKAYHATDKW
NEALQNYHQATLKSPDFYLAQFGLGQVYLHNNDYEKAVGCFEAVLEKQPENYEALQILGS
LYKVSSQSKNIEKIKNVLMKTTLLNPNDSSNWLELAQLLESSDVSSSLDAYEKGINLLKK
DGIEISTEILNNMAVLNHRKGSFSNAEKLYLKVIEASGHKLEDFKAVNITTTYNLARLYE
SMNKFDQARQLYKGIIKEHPNYMDCYLRLGAIAKSEGNSYESGEWYKEALNIDPNSPETW
SLYGALHLSNEQWNHAQKKFEQILEVVNKNDPYASIALANIYFNAKYQYPEKSEKYLSIA
ESFYSRILSRHNDNIYAANGLGMVAAAKNNLLLATEIFIQLRESAIDVSTISVNLAHVYM
SRNLFDNAIKLYEGSLKKCNNTKDMEAIYGYLSKAYFLARRYQECKQILKKAIHFSPSNL
ALWYNLALAIESQSMAILEKPNKSLPEVASVNREVVYARHLLMNLVSQKTQKPNYDVKRC
KTHLLSLTELAKKVGEELKSLEDLETENAKKRESAAVEAKKRADEREREEKEQEEAKKAK
EEEHQRMAEEYRASWNAARADKEREEKDEDYGSAKKKKRGAEESSDEEYTVDKKEKKKAK
KEKKKEKKEKRREKRDKKKKEKQQKEGKEGEEDDEEGEEKKSRDSSDQEENDQKDQEMDK
QEEQKDTSKPSDTKDDDDDLFGSGDEL
NT seq 3144 nt   +upstreamnt  +downstreamnt
atgacaagttcatataacaactcatcatcatattcatcttcatcttattcatcatctaca
accactgctccttcttcttcttcttcttcctcatcctcatcaccaaatatttatattcca
attcgtggatctgaaagatatgtatcagtatcatctgacaatttaccaagtgtaaaggat
gtcattgaaatattaagaggtgaagttgcaccacttgacatttggttacaaatagctatt
gaatattataaacaaaatcatatagatgactttaagacattacttgggattgcattggat
ccagcagcagaagagttttacaaggattcaaagtttgaaagaatagccatgttgaatgca
atggcatcatactatacacagctgggtaatgttgaaaaggataaaggtaaaaaggaagac
tattaccaagaagcaacctatagattcacaaaggccgatcgtattgatcctcgtcagcct
ctaacttttatcggcaaggctgcactcttgttggccaagggtgaggttgatcgtgctgct
ctcaactttcaacaagctctctctgctagtagtaatactcacaattcaaatacttcaaca
actttacctcttttccctgctaaattgggttattcatgtgtattatttaataaaggagaa
attaataaagcagttgaatcattacaaaagttattgatacagaatccagtgtctgcatcg
gtccgtttgggattgggatactgtttctacaagttgggcaagatcgaggcggccaaaaag
gcattccaaagagtattggagattgatttggacaatgtagatgcgttggtggcgttggca
acaatccataccaatcaaggtgacattgacactggcatgaaacttattgttcaggcgtac
gagttggcacccaacaatccaatcgtactcaaccaattggccaaccactttttctacaag
ggtgattataccaaggtacatgccttggcacaggcagccatgtccaacactgacattaac
caaatcaaagcagaggctagttatatcattgccaaggcataccatgctactgacaagtgg
aacgaagctcttcaaaactatcatcaagcaaccctcaaatcacccgatttctacttggcc
caatttggtcttggtcaagtctaccttcacaacaacgactatgaaaaggctgtcggttgt
tttgaagcagttttggaaaaacaaccagaaaactacgaagcacttcaaatccttggtagt
ctctacaaagtatcatcacaatcgaaaaacattgaaaaaatcaaaaatgtcctaatgaaa
acaactctattaaatccaaatgattcttcaaattggttagaattggctcaattattagaa
tcttctgatgtttcttcttctcttgatgcatatgaaaaaggaattaatttattaaaaaaa
gatggaattgaaatatcaactgaaatattaaataatatggcagtattaaatcatagaaag
ggatcattttcaaatgcagagaaattgtatctcaaggtgatcgaagcatctggtcataaa
ttggaggatttcaaggctgttaatatcaccacgacctataatcttgctagattgtacgaa
tcgatgaataaatttgatcaggctcgtcaactgtacaagggaatcatcaaggaacatccc
aactatatggattgttatcttagacttggtgccattgccaagagtgaaggcaacagctat
gaaagtggagaatggtacaaggaagcactcaacattgaccccaactcgccagagacttgg
tcactctatggtgcactccacctctccaacgagcaatggaatcatgctcagaaaaagttt
gaacaaatcctcgaggttgtcaacaagaatgatccatatgccagtattgcattggccaat
atctatttcaacgccaagtatcagtaccctgaaaagtcggaaaagtatctctctattgct
gaatcattctactctagaatcttgtctcgtcacaatgacaatatctatgctgccaatggt
ttgggtatggtcgctgccgccaaaaacaatctcctccttgcaactgaaatctttattcaa
cttcgtgaatctgctatcgatgtttcaaccatatcagttaatttggctcatgtttacatg
tctagaaatttatttgataatgctattaaattgtatgaaggaagtttaaaaaaatgtaat
aatactaaagatatggaagcaatttatggatatttatcaaaagcatatttcttggcacgt
cgttatcaagaatgtaaacaaatattgaaaaaggcaattcatttttcaccatcgaatctt
gcactttggtacaacttggcattggccattgaatctcaatcgatggccattttggagaaa
ccaaacaaatctcttccagaggttgcaagtgtcaatagagaggttgtatatgctcgtcat
ttattgatgaatcttgtctctcaaaaaactcaaaaaccaaattacgatgttaaaagatgt
aaaactcatttattatctttgactgaattggcaaaaaaggtaggagaggaattaaaatca
ttggaagatttggaaactgaaaatgctaaaaagagagagagtgctgcggttgaggctaaa
aagagagccgatgaaagagaaagagaggaaaaggaacaagaagaggccaaaaaggcaaag
gaggaagaacatcaacgtatggccgaggaatatcgtgccagttggaatgccgccagagca
gacaaggaaagagaagaaaaagatgaagactatggaagtgccaaaaagaaaaagagaggt
gccgaagaatcaagtgacgaagaatacactgtcgataaaaaggagaaaaagaaggccaaa
aaggagaaaaagaaagaaaagaaggaaaaacgaagagaaaaaagagataaaaagaaaaaa
gaaaaacaacaaaaggaaggaaaggaaggagaagaagatgatgaagaaggagaagaaaag
aaatctagagattcaagtgatcaagaagaaaatgatcaaaaggatcaagaaatggataaa
caagaagaacaaaaagatacaagtaaaccatctgatacaaaggatgatgatgatgattta
tttggtagtggtgatgaactttaa

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