Cavenderia fasciculata (cellular slime mold): DFA_07898
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Entry
DFA_07898 CDS
T02668
Symbol
dhx15
Name
(RefSeq) DEAD/DEAH box helicase
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_07898 (dhx15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_07898 (dhx15)
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_07898 (dhx15)
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
DFA_07898 (dhx15)
Spliceosome [BR:
dfa03041
]
Complex A
U2 snRNP components
U2 related factors
DFA_07898 (dhx15)
Complex B
DFA_07898 (dhx15)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
DFA_07898 (dhx15)
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
Helicases
DFA_07898 (dhx15)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
AAA_19
AAA_22
DEAD
nSTAND3
SRP54
ATPase
ABC_tran
T2SSE
TsaE
AAA_30
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
14869216
NCBI-ProteinID:
XP_004355391
UniProt:
F4Q403
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MNHKRKNREESQEEEYNPEQPEIAKKKMGGEQQEIKNIAEESDKDPSININGKPFTNRYY
EILKGRKQLPVYEQRDDFINKLLNNQVIVLVGETGSGKTTQIPQFVLESGLIKEGTMVAV
TQPRRVAAISVATRVAEEMDVKLGEEVGYSVRFEESTSDKTLMKYMTDEPERDYLEAAVR
TVLTIHAEEPEGDILPFPNRKVILSTNIAETSVTIDGVVYVVDPGFSKQKTYNPRSRVES
LLVTNISQASAKQRAGRAGRTRPGKCFRLYTEHDFKKELIAQTYPEVLRSNLSTVILQLK
RLGVDDLVHFDWMDPPAPETLMRALEVLHYLGALSDEGDLTKDGEMMAEFPLDPQLSKML
VISPSYGCSNEMLSIAAMLSVPPVFQRPREARREADEAKKQFDHVEGDHLALLNVYHAYK
QSGSDRKWCYDNFLNNRALEQASSVRNQLANLMNKFKLNLVSNDSANSHLYYQNIRKCVV
AGFFMQMAKIEKKNQYYTLGDDAPVIFHPSTGLIRRPEWVVYSELVLTSTSYIRCVTDAR
IEWIYEIAPHYLESLTEDTTPPKSRAVISRFLSSKKPQQPQKRR
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaatcataaaagaaagaatagagaagaaagtcaagaagaagaatataatccagaacaa
ccagaaatagcgaaaaagaagatgggaggagaacaacaagagattaaaaacatagcagag
gaatctgataaagacccaagcatcaatatcaatggcaaaccatttacaaatagatactac
gagattttaaagggaagaaagcaattgcccgtctatgaacaacgtgacgatttcatcaac
aaactactcaacaatcaagtgatcgtgttggttggtgaaactggttcgggaaagacgaca
cagatcccacagtttgtactcgagtcgggcctcatcaaggagggtacgatggtggctgtc
actcaaccacgtagagtggctgccatttcggtggctactcgtgtcgccgaggaaatggat
gttaagttgggcgaggaagttggttactcggtgcgtttcgaggagagcaccagcgacaag
acactgatgaagtacatgacggatgagcctgagcgcgactatctcgaggctgccgtacgc
acggtgctaaccatccacgctgaagagcccgaaggtgatatcctgccattccccaaccgt
aaggtcatcctttcgaccaatattgccgagacatccgtcacgatcgacggtgtcgtctat
gtggtcgatccaggcttctccaagcaaaagacgtacaacccacgttcgcgtgtcgagtcg
ttgctcgtgaccaacatctcgcaggcttcggccaagcagcgtgccggtcgtgccggtcgt
accagacccggaaagtgcttccgtctctacaccgagcacgactttaaaaaagagttgatt
gcacagacctaccccgaggtgctgcgttccaacttgtcgaccgtcatcctccaactcaag
cgtctcggcgtcgacgatctcgtccactttgactggatggatccacccgcccccgaaaca
ctcatgcgtgcactcgaagtattgcattacctcggcgcactcagtgacgagggtgatctc
accaaagacggtgaaatgatggctgaattcccactcgatccccagctctccaagatgctc
gtcatctcaccatcatacggctgctccaacgagatgctgtccatcgcagccatgctctcc
gtcccacccgtcttccaacgcccccgtgaagcccgtcgtgaggccgacgaggccaagaag
cagtttgaccacgttgaaggcgaccatttggcgttgctcaacgtctaccacgcctacaag
caaagcggcagcgaccgcaagtggtgttacgacaactttttgaataaccgtgccctcgaa
caggccagcagcgtgcgtaaccagctcgctaacctcatgaacaagttcaagctcaacctc
gtctcgaatgactcggccaacagccacctctactaccaaaatatccgaaagtgcgttgtt
gccggtttctttatgcaaatggccaagatcgagaaaaagaaccagtactacacccttggt
gacgatgcacccgtcattttccatccatccaccggtttaatccgtcgtcccgagtgggtc
gtctacagcgagctcgtcctcacctccacctcttacattcgttgtgtcactgacgctcgt
atcgaatggatctatgaaatcgcacctcactacctagaatcactcaccgaagataccacc
ccaccaaaatcaagagccgtcatttcaagattcctttcaagtaaaaaacctcaacaacct
caaaagcgaagataa
DBGET
integrated database retrieval system
