Cavenderia fasciculata (cellular slime mold): DFA_08051
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Entry
DFA_08051 CDS
T02668
Symbol
AAC3
Name
(RefSeq) WD40 repeat-containing protein
KO
K12880
THO complex subunit 3
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03013
Nucleocytoplasmic transport
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_08051 (AAC3)
09122 Translation
03013 Nucleocytoplasmic transport
DFA_08051 (AAC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_08051 (AAC3)
03041 Spliceosome [BR:
dfa03041
]
DFA_08051 (AAC3)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
DFA_08051 (AAC3)
Spliceosome [BR:
dfa03041
]
Complex C
Other components
EJC/TREX
DFA_08051 (AAC3)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
DFA_08051 (AAC3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40_CDC20-Fz
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
EIF3I
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_NOL10_N
DSE1_N
WD40_MABP1-WDR62_2nd
Beta-prop_WDR36-Utp21_1st
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_WDR41
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_Vps41
PAC11
B-prop_COPA_B_2nd
NBCH_WD40
Beta-prop_WDR75_1st
RMC1_N
Beta-prop_DCAF12
PSII_BNR
Peptidase_S9_N
New_glue
TFIIA
CSNKA2IP
SR-25
WD_LRWD1
TRM82_WD
Beta-prop_SCAP
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
14869100
NCBI-ProteinID:
XP_004355553
UniProt:
F4Q4W3
LinkDB
All DBs
Position
Unknown
AA seq
437 aa
AA seq
DB search
MSHRMNSNSNLFIPVGRPPYYLQPQMVNPQMMGHHHAFPPPPNVYSYHHQQQQQQQQQQQ
QQQQQQQQQIHAIPPPVPQDKPSSSSSSSSTPASSSSSSSSSSTTNTTTVKTNTPYSNNF
TNFELASRYFSECTTKEFVGHKNKVNSVVWSIDGKKFASGSSDKTLKIWNIEHSKPIFDL
SHKESVEQLRWSPVHPDLLASASTDKTIKIWDTRSGKATDTITTPGENINLCWSPDGNII
AVGNKEDIVTTIDLKGRKNNSKKYMKQYQYQYEINEIGWDLKGELFILTTGTGAVEVSTC
TTSDIKKICSILAHPANLYTLEFDPLKRYFAVGGADAQISLWDIEEMICIKSFGKLTSQI
RAMGFSSDGQFLAYAADDPFIEISHVETGQSIFQVPGDTGFNSLSWCPNAPMIAYASDDK
DKKEKDVGIVRVFGYHS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgtcacatagaatgaattcaaattccaacctattcataccggttggaagaccaccatat
tatttacaacctcaaatggttaatcctcagatgatgggtcatcatcatgcattcccacca
cctcccaatgtatactcttatcatcatcaacaacagcaacaacagcaacaacaacagcag
caacaacagcaacagcaacaacaacagatacatgctatacctccaccagttcctcaagat
aaaccatcttcatcatcatcatctagttcaacacctgcttcatcatcttcttcatcttca
tcatcatcaacaacaaatacaacaactgtaaagaccaatacaccatatagtaataatttt
acaaattttgaacttgcatcaaggtatttttcagaatgtacaactaaagagtttgtagga
cataaaaacaaagtaaattctgttgtttggtcaatagatggtaaaaaatttgcaagtggt
agtagtgataaaactttaaagatttggaatattgaacatagtaaaccaatatttgatcta
agtcataaagaatcagttgaacaattaagatggagtcctgtacatccagatttattggca
agtgcaagtacagacaagactataaagatatgggatactagaagtggaaaggcaaccgat
acgattacgacaccaggtgaaaatattaatctttgttggtctcccgatggcaatataatt
gctgttggaaacaaagaagatattgttacaacgatcgatctcaagggtagaaagaacaac
tctaaaaaatatatgaaacaatatcaatatcaatatgaaatcaatgaaattggatgggat
ctaaaaggtgaattattcatcttgactactggaactggtgcagtcgaagtatcaacttgt
acaactagcgatattaaaaagatttgttctattcttgctcatcctgctaatttatatact
ttagaatttgatcctctaaaaagatattttgcagttggtggagcagatgctcaaatttca
ttgtgggatattgaagaaatgatttgtataaaatcatttggtaaattaacatcacaaata
cgtgctatgggtttctcttctgatggtcaatttttggcttatgctgctgatgatcctttt
atcgaaatttcacatgttgaaactggtcaatccatatttcaagtaccaggtgatactggt
tttaattctttatcatggtgtccaaatgctccaatgattgcttatgccagtgatgataaa
gataaaaaagaaaaagatgttggtattgtcagagtatttggttatcattcctaa
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integrated database retrieval system
