Cavenderia fasciculata (cellular slime mold): DFA_08133
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Entry
DFA_08133 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
DFA_08133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dfa03041
]
DFA_08133
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_08133
Enzymes [BR:
dfa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
DFA_08133
Spliceosome [BR:
dfa03041
]
Complex A
U1 snRNP components
U1 related factors
DFA_08133
Complex B
DFA_08133
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
Pre-60S particles
Helicases
DFA_08133
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
ERCC3_RAD25_C
Terminase_6N
MAML2_TAD
Motif
Other DBs
NCBI-GeneID:
14869183
NCBI-ProteinID:
XP_004355635
UniProt:
F4Q592
LinkDB
All DBs
Position
Unknown
AA seq
640 aa
AA seq
DB search
MFSLLKSSVFSVTTSNTTTAAAVVISTTSSRFFGSSSFMLNRFNNNYNNNNNNRSFNNYN
NNNNQNQSSFGYQQQQQQQTRAPRDGVKFSFGQKQQQQQQDDDSEPMNMGFIERSGGSNK
MMGNGGGDAQNPLAPVDWSLEQLPAIEPVDYVPSENTASMTPADRDAYFKDNNIFVTSRD
QSAVPNPITEFDDSPFPAQIKSILNTNFEKPSVIQTIGWPSSLAGRDLLGISQTGSGKTL
SFGIPAIMHILAQKQVKYFGPQVLVVAPTRELSVQIAQEMAPYLKACGLKFATLYGGDPK
IKQIEQMRYKPQFVVGTPGRILDLANDGYLSLKRTSYVVLDEADRMLEMGFEDQIRQIFS
NVRPDHQLLYWTATWPKKVEALANEFIKTPIRVQVGNGELSANPNITQNFTICETEADKT
SKLIDVLEGIFTERPTAKVLIFTMTKGGADKLADYIRSNGNARIDSIHGDKQQSRRIAII
NAFKRDQLDILVATDVASRGLDIRTITDVINFSMPNQSESYVHRIGRTARAGASGYSHSL
ISKTSSNDIELIPDVIDLLERANQPIPEDLKALAPRKQQNNSYNNRGFGGNRGYNNNRGG
GRGGYNNNRGGSRGGYNNNNNGGGSRFGGQRSGPISFGGN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgttttcattattaaaatcatctgtattttcagttacaacatcaaatactactactgct
gctgcagtagttatttcaactacatcatcaagattctttggttcttcaagtttcatgttg
aatagattcaataacaattacaacaacaataataataatagatcattcaataactataat
aataataataatcaaaatcaatcatcttttggttatcaacaacaacaacaacaacaaaca
agagcaccaagagatggtgtaaagttttcatttggtcaaaaacaacaacaacaacaacaa
gatgacgactctgaaccaatgaatatgggatttattgaaagaagtggtggttcaaacaag
atgatgggtaatggtggaggtgatgctcaaaatccacttgctccagttgactggtcattg
gaacaattaccagccattgaaccagtagactatgtcccatctgaaaacactgcatccatg
acaccagccgatcgtgacgcctatttcaaggataacaacatctttgtcacttctcgtgat
caatctgccgttccaaatccaatcacagagtttgatgattccccattcccagctcaaatt
aaaagtattttaaatacaaactttgaaaaaccttctgttattcaaactattggatggcca
tcaagtttggcaggaagagatttattaggtatttcacaaactggatctggtaaaacactt
tcatttggtattccagctattatgcatattttagctcaaaaacaagttaaatactttgga
ccacaagtattagtagtagcaccaacaagagaattaagtgtacaaattgcacaagagatg
gcaccatatttaaaggcatgtggattaaagtttgcaacattgtatggaggtgatcccaag
attaaacaaatcgaacaaatgagatacaagccacaatttgttgttggcacaccaggacgt
attcttgatttggccaatgatggatacctctcactcaaacgtacttcatacgttgtattg
gatgaagccgatcgtatgctcgagatgggttttgaagatcaaatccgtcaaatcttttcc
aatgttcgtccagaccaccaacttttgtactggactgccacctggcccaaaaaggtcgag
gctcttgccaacgaattcatcaagacacccatccgtgtccaagtcggtaacggtgaactc
tctgccaacccaaacatcacccaaaactttaccatttgcgagaccgaggctgacaagacc
tccaagttgatcgacgttctcgaaggcatctttaccgagcgtccaaccgccaaggtgctc
attttcaccatgaccaagggcggtgccgacaagctcgccgattacattcgttccaatgga
aacgcccgtatcgactctatccacggcgacaagcaacagagccgtcgtatcgccatcatc
aacgccttcaagcgtgaccaactcgacattttggtcgctaccgatgttgcctcgcgtggt
ttggatatccgtaccatcaccgatgtcatcaacttttcaatgccaaatcaatccgaatcc
tacgttcatcgtatcggtcgtaccgctcgtgctggcgcttccggttactctcactctctc
atctccaaaacttcaagcaacgatatcgaattaatcccagatgtcattgatcttttagaa
cgtgccaatcaaccaatccctgaagatctcaaagctttagctccaagaaaacaacaaaat
aatagttacaacaatagaggttttggtggaaacagaggttacaataataatagaggtgga
ggtcgtggtggttacaataataatagaggtggaagtcgtggtggttataataacaataac
aatggtggaggtagtagatttggtggtcaaagatcaggtccaatatcttttggtggtaat
taa
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