Cavenderia fasciculata (cellular slime mold): DFA_08173
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Entry
DFA_08173 CDS
T02668
Name
(RefSeq) chromo domain-containing protein
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_08173
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_08173
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
DFA_08173
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
DFA_08173
SLIK complex
DFA_08173
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_Hrp3
CHD1-like_C
Chromo
ResIII
HDA2-3
DEAD
Myb_DNA-binding
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
14869128
NCBI-ProteinID:
XP_004355670
UniProt:
F4Q5C7
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MDFNYSNNSNSSNRNTNNNNNVDIGSSTIMSDEESQHINIGTDNHHNNSSSNNITIREDN
RNGISSSSTIREGDDDEDMISDEGDDSSSSGSDDSDDSSDDQEQQQISPPPALPHSTTSS
VVSQKKESDDDYEPSEEDEEEEEEESDQEEQKKDNDESYQEESEEEEEEEYAPTRASSSS
RRQANNFKFSDYLLDDEEKSSSEEEEESQSDSDYSPTRKSKSKKIKKKTKKGPSRSQQRR
KEEELAAMRMQTRPTRERRQTVRLYDELKDDSDDQEEQGEGNDESMGFQSASDDSDKSYS
GGDDDDYSDDDGGYSKKSKKKKKPAFESITLSNLRDRRNLKTYKIESSDEEDDEYGDDDT
QDYEDYSDDDGGRKAKKQQQVKQIGPFEATEDIIEQIMDHRLASVANLDPTSSAADKQQQ
QQEEQQQEEQETTFNVERYQFLVKWKGWAHIHDTWDSYDKLIPFKGNKKLINYVKTLLEQ
KQWRKEASREDIEQADISRELDRQEYLEKLNVERIIAKREIDETEEYKTGVQYLVKWWKS
AYSEVTWEHPEDIKPFQGEIDRYLERIQTPLHNIGGISAKKRLDQGFEKFNTQPDWISAG
KLRDYQMDGLNWLIHSWFNNTNVILADEMGLGKTIQTISFISYLYNVQQMSGPYLVVVPL
STIENWQREFAKWAPSMNLIVYTGSAGSRDIIKEYEFYQYQYGKKKLNFNVLLTTYDFIL
KDKQVLGSIKWEYLAVDEAHRLKNNESMLHEVLKFFKTGNRLLVTGTPLQNSMKELWNLL
NFLMPNKFHSLKDFQDQWSDLKEKDQIAELHNELKPHLLRRIKKEVEKSLPAKTERILRV
DLSPLQKKYYRLILKKNFQELNKGVKGEKTSLLNIVVELKKTCNHPYLFESAENENYNDS
LDALIKGSGKLILLDKLLIRLKETGHRVLIFSQMVRMLDILARYLKHRGFLFQRLDGSMS
REKRSQAMDRFNAEGSPDFCFLLSTRAGGLGINLSTADTVVIFDSDYNPQNDLQAEARAH
RIGQKNAVNIYRLVTKKTVEEDILERAKQKMVLDHLVIQSMDTKSSSSKSAGSAPSQVFN
KEELDAILKFGAEDLFKESDDAAQQQQPEMDIDEILSRAEQRSESNELTAGEELLNSFRV
ANFTTSKEKEDINWESIIPDKDRQQPDQGNTFLPPRRARIDTSKSAAAAASKKASESITL
TINPKKEITALNKKDLKILIKSFKKFCDYHRAKEILLDSNLKQINLKIIEEICKEVIEIC
KKSKRENPECDKITIMYSGVDINANEFIQKVDEMETLQELVRPHLNNYEQFRVTFPVRPV
TWAIKWGAKEDAMLLMGIYKHGNGNWDAIQKDTSLGLENVISVAGAEEDPAMASTKIKGP
SLQRRVDSLLKSAKDSIISKKKPLATITIPKLANKKPQPRGGSKSKNDQDHDDEKIPRKR
GTKGNSSSTSSTSTTSTSSSSSKRGSSTPTKRGTRGKASEHQSEDEYNTPITPKRTSSGR
VSQPPTKLGSERENGSGRGKKTDSTSTSTTSTSTPSRRKLMSDEEMEDSPKRGRKRKEYS
DEEKPTSSSSVSTSTTQQKKRVSSSSDERPDTRLLLKCEQYLQPVQKHLDKFKNLSDLER
EAKVRKTKKYMLSLGGEITKIVGHQRGTEDIKNKLEKHLWLYASGFTALGGDELKKLFDK
MKTTQQQQQKNNNGSNNNNNNSPSKPSMKLVINKTK
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaattacagtaataatagtaatagtagtaataggaatactaataataataat
aatgttgatattggttcatcaacaataatgagtgatgaagaatctcaacatataaacatt
ggtactgacaatcatcacaacaatagtagtagtaataatataacgataagagaagataat
agaaatggtattagtagtagtagtactattagagaaggtgatgatgatgaagatatgatc
agtgatgagggggatgactcctcctcctctggctctgatgactctgatgactcttctgat
gatcaagaacaacaacaaatatcacctccaccagctctacctcattcaacaacatcatca
gtcgttagtcaaaagaaagaaagtgatgatgactatgaaccaagtgaagaagacgaggag
gaagaagaagaagaatctgatcaagaagaacaaaaaaaagataatgacgaatcatatcaa
gaggaatcagaggaagaagaagaagaagaatatgcaccaacaagagcttcatcatcatca
agaagacaagccaataatttcaagtttagtgattatttattagatgatgaagagaaatca
tcatctgaagaagaagaggaatctcaatccgattctgattatagtccaaccagaaaatca
aaatccaagaaaataaagaaaaagacaaaaaagggaccatcaagaagtcaacaaaggaga
aaggaagaagaattggcagcaatgagaatgcaaactagaccaacaagagaaagacgccaa
acggttagattgtatgatgaattaaaggatgattcggacgaccaagaagaacaaggagaa
gggaatgatgaatcaatgggattccaatcggcaagtgatgatagtgataaaagttatagt
ggaggagatgatgatgattattcagatgatgatggtggttattctaaaaaaagcaagaaa
aagaaaaaacctgcatttgaatcgattacattatccaatcttagagatcgtcgtaatcta
aagacttacaagattgaaagttcagatgaagaagatgatgaatatggagatgacgataca
caagattatgaagattatagtgatgatgatggtggtcgtaaagcaaagaaacaacaacag
gttaaacaaattggaccatttgaagcgacagaagatattattgaacaaattatggatcat
cgattagcatcggttgccaatttggatccaacctcttctgcggcagacaaacaacaacaa
caacaagaagaacaacaacaagaagaacaagagactacattcaatgttgaaagatatcaa
tttttggttaaatggaaaggatgggcgcatattcatgatacatgggatagttatgataaa
ttgataccgttcaagggtaacaagaagcttataaactatgtaaagacgctgttggaacaa
aagcaatggagaaaggaggcatcaagagaggatattgaacaggcagacatttcaagggaa
ttggatcgtcaagaatacctcgaaaaactaaacgttgaacgtatcattgcaaagcgagag
attgatgaaaccgaagaatacaaaactggtgttcaatatcttgtcaaatggtggaaatct
gcctattcagaggttacttgggaacatccagaagatatcaaaccattccaaggtgaaatt
gaccgatacctagaacgtattcaaacacctcttcataatattggtggtatatcggccaaa
aaacgtcttgatcaaggttttgaaaaattcaacactcaaccagattggatttctgccgga
aagctacgtgattatcaaatggatggtttaaattggttaattcattcttggtttaataat
acaaatgttattttagctgatgaaatgggacttggaaaaacaattcaaacaatatcattt
atatcatatttatataatgttcaacaaatgagtggaccttatttggttgtagtaccatta
tcaactattgaaaattggcaaagagaatttgcaaaatgggctccatcaatgaatttaatt
gtttatactggtagtgctggtagtcgtgatattataaaagaatatgaattttatcaatat
caatatggtaaaaagaaattaaattttaatgttctcctaactacttatgatttcatttta
aaagataaacaagtacttggatcaattaaatgggaatatttagcagtagatgaagcacat
agattaaaaaataatgaatcaatgttgcatgaagtgttgaaatttttcaagactggtaat
agattattggtaactggtacaccattacaaaattcaatgaaggaattgtggaatttgtta
aactttttaatgccaaacaaattccattcactaaaggatttccaagatcaatggtcagat
ttaaaggaaaaggatcaaattgccgaacttcacaacgaactcaaaccacatcttttacgt
cgaatcaaaaaagaggttgaaaaatctctaccagcaaagactgaaagaatattgcgtgtc
gatctatcaccactacaaaagaaatactatcgattgattttgaaaaagaactttcaagaa
ttaaacaagggagtcaaaggtgaaaagactagtctcttgaatatcgtcgtcgagttgaaa
aagacatgcaatcatccatacctatttgaaagtgcagagaatgaaaactataatgactct
ttggacgccttgatcaagggatcgggtaagctcattcttttggacaagttgttgatccgt
ctcaaagagactgggcatcgtgtactcatcttttcacagatggttcgtatgctcgacatt
ttggctcgttatctcaagcaccgaggattcctctttcaacgtttggatggctctatgagt
agagaaaagcgtagtcaagccatggaccgtttcaacgcagaaggttcaccagacttttgt
ttcctactctctaccagagccggtggtttgggtattaatctgtcgacagccgacactgtt
gttattttcgactctgattataatcctcaaaacgatcttcaggctgaagctagagctcat
cgtattggtcaaaagaatgcagtcaatatttatcgtctagtcacgaaaaagacggtggaa
gaggatattttggaacgtgccaaacagaaaatggtacttgatcatttggtcattcaatca
atggacaccaagtcgtctagtagtaaatcggctgggtctgctccaagccaagttttcaac
aaggaggaattggatgctattctcaaatttggtgcagaggatttgtttaaagaaagtgat
gatgccgcacagcaacaacaacccgaaatggacattgacgagattctttctcgtgccgaa
caacgatcagaatcaaacgagttgactgcaggagaagagttgttaaactcgttccgtgtc
gccaatttcacaacctccaaggaaaaggaagatatcaattgggaaagtatcattccagat
aaagatcgtcaacaacccgatcaaggtaatacttttctaccaccaagaagagctcgtatc
gatacttcaaaatctgctgctgccgctgctagtaaaaaagcctcagaatctattaccctc
accattaaccctaaaaaggaaattacagccctcaacaaaaaggatcttaaaatccttatc
aaatcttttaaaaagttttgtgattatcatagagcaaaagaaattttattagattcaaat
ttaaaacaaattaatttaaaaataattgaagaaatttgtaaagaagtaattgaaatttgt
aaaaagagtaaaagagaaaatccagaatgtgacaagattacaataatgtattcaggagtt
gatatcaatgcaaacgagtttattcaaaaggttgatgaaatggaaacattgcaagaattg
gttagacctcatttaaacaattatgaacaatttagagtgacgttccccgtcagaccagtc
acttgggcaattaaatggggtgccaaagaagatgccatgctcttgatgggtatttataaa
catggtaatggaaattgggatgccattcaaaaagatactagtttgggattggaaaatgtt
attagtgtcgccggcgctgaagaagatcctgccatggcatcaacaaaaatcaaaggtcct
tctcttcaacgtagagtagattctttattaaaatctgccaaagattctatcatttctaaa
aagaaacctcttgccactatcactataccaaaattggcaaacaaaaaaccacaaccacgt
ggtggttcaaagagtaaaaatgatcaagatcatgatgatgaaaagataccaagaaaacgt
ggtactaaaggcaacagtagtagtacatcaagtacttctactactagtacttcttcttct
tcttcaaaaagaggttcatcgactccaacaaaaagaggtacaaggggaaaagcttcagaa
catcagtctgaagatgaatataatacaccaattacaccaaaaagaactagctctggtaga
gtttctcaacctcctacaaaacttggtagtgaacgtgaaaatggtagtggtcgtggtaaa
aagacagattcaacatcgacatcaacaacatctacatcaacaccatcaagaagaaaatta
atgtctgatgaagaaatggaagattctccaaaaagaggtagaaagagaaaagaatattca
gatgaagaaaaaccaacttcttcctcctcggtttctactagtacaacacaacaaaaaaag
agagtttcttcttcttctgatgaaagaccagatactagattattgttaaaatgtgaacaa
tatttacaaccagttcaaaaacatcttgacaagtttaagaatctctctgatcttgaaaga
gaggccaaggttcgaaaaactaaaaagtacatgttgtctttgggtggagagattacaaag
attgtgggccaccaaagaggcactgaagacattaaaaacaaattggagaaacatctttgg
ctctatgcttctggatttactgctcttggtggagatgaactcaaaaaattgtttgataaa
atgaaaactactcaacaacaacaacaaaagaataataatggtagtaataataataataat
aattctccttcaaaaccatcaatgaaattggttataaataaaacaaaataa
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integrated database retrieval system
