Cavenderia fasciculata (cellular slime mold): DFA_08207
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Entry
DFA_08207 CDS
T02668
Name
(RefSeq) phosphatase tensin type domain-containing protein
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03410
Base excision repair
dfa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DFA_08207
03450 Non-homologous end-joining
DFA_08207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_08207
Enzymes [BR:
dfa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
DFA_08207
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
DFA_08207
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
DFA_08207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
PTEN_C2
BRCT_2
Tc-R-P
BRCT
HHH_5
Motif
Other DBs
NCBI-GeneID:
14868714
NCBI-ProteinID:
XP_004355704
UniProt:
F4Q5G1
LinkDB
All DBs
Position
Unknown
AA seq
1026 aa
AA seq
DB search
MLQIEIITTPHHFFYSQQHFTLLCFQDFFFIMVKLTLVSGQKKRFTNDGFNLDLGYITER
IIAMGYPADSLAKVIRNDISHVYDFFETYHKDHWKILNVAREISYKHTKLGGNVVIMAFE
DHSPPPFLTLLDIIDWMDQWLSSDQRNVVAIHCKAGKVSCYLIYMLKRDCQEIFDTSDSI
LLNTISFFNSMRSINGQPCVTVPSQKRYIGYYISHLKGLVPKELIIKPPLYKITSIEICS
NSFITSIELHKNYNPNIRSLPLIFHKNNTIIIGNDKYMRFELKHIIIQGDTMMKFNMSDS
NTCVCRLFFHTSFVTPPIDTNGNKTTSIVFPKMLLDGPSHGSLEDSSISSKFKPDFQINL
HLEAVNEPLQLSSQQQQIVYNSPTFATRPITHPQMSQQQSLSSSSSFNLPPPPVPDRKII
MFKNNIFYINKKGIGRLQQNIIQTKIISNGGTICQHITTLTTHILVQDSTSIIDPITLSS
DFKDLILSKSIVGYTINWLTLSIQKGEKIIDDAKFLIPLHYQQQQPIDQSTPTKKNVHYN
EPIDDITTRQLKRSKNDSFSSSSSSSLSFLPTLSPIKKSSSSTNYYQIPTKLEDIDINSS
WLSYQSSSDDESTKSIDNSTIDYSFVSFDSDGEEDQLISQSLISNSLFTSQLPYSLKFQP
NHQEEEEEESINNNNNNSTQSLIKYTKRAKGFACQKGTKINYNESITSVLEKLLEKALGD
GDRWREYAYKRAIGILKGLTFKLSSSKDLGDIRGIGPKIREKIDEIIETGTLRRVESSLS
DTTNQISQALLKIHGAGPNTVKNWMAAGVVSIQQLRQHILIDPLFLTSQQHIGLKYYEDF
LTRIPRLEVINIVSIIENVVKELDPNIIMEVCGSFRRMKKDCGDIDILFTHSKGEILNGL
LRRLTLKLESINLLTDHLTSVKSDSDKYMGVCRLGPDGLHRRIDFQTISKEEWPFALLYF
TGSDHFNRSMRLWARRNGFSLSESHLVRRMGKNENEIKGDPIHASCEKDIFALLGLEYRH
PQDREV
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgctgcaaattgaaattattacaacaccacaccactttttttactcgcaacaacacttt
actctactctgctttcaagatttttttttcataatggttaaattaacattagtatcagga
caaaaaaagagatttacaaatgatggattcaatttagatcttggttatatcactgaaagg
attattgcaatgggatatccagcagattcattggcaaaggtcattcgaaatgatatttca
catgtctatgatttctttgaaacctatcacaaagatcattggaagattctaaatgtggca
cgtgaaatttcatacaaacatacaaaattgggtggcaatgttgtcattatggcatttgaa
gatcattctcctcctccttttttaacattattggatatcatagattggatggatcaatgg
ttatcatctgatcaaagaaatgttgttgctattcattgtaaagctggaaaggtttcatgt
tatttaatttatatgttgaaaagagattgtcaagaaatatttgatacatcggattctata
ttattaaatacaatcagtttttttaattcaatgagaagtatcaatggacaaccatgtgta
acagtaccatcacaaaaaagatatattggttattatatttcacatctcaaaggacttgta
ccaaaagaattaatcattaaacctccactttacaagattacctctatcgaaatttgtagt
aatagttttataacttctatagaattacataaaaattataatccaaatattagatcatta
cctttaatatttcataaaaataatacaattataattggaaatgataaatatatgagattt
gaattaaaacatataattattcaaggagatacaatgatgaaatttaatatgagtgattca
aatacatgtgtatgtagattatttttccatacttcatttgtaacaccaccaatagatacg
aatggcaacaagacaacatcgatcgttttcccaaaaatgctattggatggaccttcacat
ggatctttggaagatagtagtattagtagtaaattcaaaccagactttcaaattaattta
catcttgaagctgtcaatgaaccattacaactatcatcccaacaacaacaaatagtttat
aattcaccaacatttgcaacaagacctataactcatcctcaaatgagtcaacaacaatct
ttatcatcatcatcatcatttaatctaccgcctccaccagtacctgatagaaagataata
atgtttaagaataatatattttatattaataaaaaggggattggaagattacaacaaaat
attattcaaactaaaatcatatcaaatggaggaacaatttgtcaacatattacaacacta
acaactcatatacttgttcaagattctacctctatcatagatcctatcactctttcatct
gattttaaagatttaattttatctaaatcaattgtaggatatacaatcaattggttaaca
ttatcaattcaaaaaggtgaaaagataattgatgatgcaaagtttttgataccgttacat
tatcaacaacaacaaccgattgatcaatctacaccaacaaagaaaaatgtacattataat
gaaccaatagatgatattacaacaaggcaattaaaaagatcaaaaaatgattctttttct
tcttcttcttcttcttctttatcatttttaccaactctatcacctattaaaaaatcatca
tcatcaacaaactactatcaaataccaacaaaactagaagatattgatatcaattcatct
tggttatcatatcaatcatcaagtgatgatgaatcaacaaaatcaattgataattcaaca
attgattattcatttgtatcatttgattcagatggagaagaggaccaattaatttcacaa
tcattaatttcaaatagtttatttacaagtcaattaccatattcattaaaatttcaacca
aatcatcaagaagaagaagaagaagaatcaattaataataataataataattcaacacaa
tcattaattaaatatacaaaaagagcaaaaggatttgcatgtcaaaaaggtacaaaaatc
aattataatgaaagtataacatcggtattggaaaaactattggaaaaggcattgggtgat
ggtgatcgttggagagagtatgcatataaacgagctattggtattttaaaaggtttaacc
tttaaattatcgtcatcaaaagatttgggtgacattcgaggaattggtccaaagattaga
gaaaagattgatgaaattatagaaactggaactcttagacgtgttgaaagttctctatct
gatactaccaatcaaatctcacaagctctattgaaaattcatggtgccggtccaaataca
gttaaaaattggatggctgcaggtgtcgtatccattcaacaactaagacaacacatttta
attgatcctctattcttgacttctcaacaacatattggtctaaaatattatgaagatttt
ttaactagaattcctcgtcttgaagttattaatattgtctctattattgaaaatgtagta
aaagaattggatccaaatataataatggaagtttgtggatcatttagaagaatgaaaaag
gattgtggagatattgatatattgtttactcattcaaaaggtgaaatattgaatggattg
ttgagaagacttactcttaaattagaatctatcaatctcctcacagatcatctaactagt
gtaaaatcagatagtgacaagtatatgggagtttgtagattgggtccagatggtctacat
cgaagaattgattttcaaaccatatccaaagaagaatggccttttgctttactttatttc
actggatccgatcactttaatcgttcgatgagactttgggcaagaagaaatggtttctcg
ctcagtgaatctcatctggtcaggagaatgggtaaaaatgaaaacgaaatcaaaggtgac
cctattcatgcttcttgtgaaaaagatatctttgctctacttggtttggaatatcgtcat
cctcaagatagagaggtttaa
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