Cavenderia fasciculata (cellular slime mold): DFA_08279
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Entry
DFA_08279 CDS
T02668
Symbol
utp18
Name
(RefSeq) WD40 repeat-containing protein
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
DFA_08279 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_08279 (utp18)
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
DFA_08279 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
WD40
WDR55
Beta-prop_HPS5
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Lactonase
RMC1_N
WD40_MABP1-WDR62_2nd
SGL
Beta-prop_TEP1_2nd
SPASM
PD40
Motif
Other DBs
NCBI-GeneID:
14869060
NCBI-ProteinID:
XP_004355770
UniProt:
F4Q5M7
LinkDB
All DBs
Position
Unknown
AA seq
524 aa
AA seq
DB search
MNNIQKKRPLNGKNVKATAAVVEESKAKILAKKQQEEEEEQSSSFEEEEEEENSIEQDED
EDEEEDSIEEDEEEQDSESDSDEDDEMKNALQPTKKKVKINNQTSSQVINNNNNNKKDNV
KNEGEEEENNESSNNTKKASAAAWMDDDDENTVLQKKALSKMPKWAKKSKPVVDGEEEDE
EDLEDYNHDAVEEKVFQNVTKLITDKANIDYSVLAVKTFKVFHESKKVIAIDNNNEFNIT
CVASQTNLHIYRQGTLKRAICSFTYPQGFKANFVSFIPNTNNILIVGTYGHYYLFNPETK
DLKQINLRIGKNTLKSVAVSFNYYAIEDSLGKISLISNTSNTVVNNIQLSKGNVSAIKFS
PDGNTLYVASEGSVSCFNIKTMRISHRFKDLGNVSTQSITSICCSPNGNYLATGSESGIV
NIYDIKSSMTSETPTPLKSISSIIYPITDLAYDPTSKYLCAVSELQKEIVRVIQHPSLNV
VSMVKVPKVGQLTKCSFDHQGYLVFGNARGTIYQHTAKLHHKSI
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacatacaaaagaaaagacctttaaatggaaagaatgtaaaggcaactgctgca
gtagtagaagagtcaaaggcaaagatacttgctaaaaaacaacaagaggaagaagaagaa
caaagtagcagctttgaagaagaagaagaagaagaaaatagtattgaacaagatgaagat
gaagacgaagaagaggatagtattgaagaagatgaagaggaacaagatagtgaaagtgat
agtgatgaagacgatgaaatgaaaaatgcattacaaccaacaaagaaaaaagtaaagatt
aataatcaaactagttcacaagtcatcaacaacaacaacaacaacaaaaaagacaatgta
aagaatgaaggagaagaagaagaaaataatgaatcatcaaacaataccaagaaagcaagc
gctgctgcttggatggatgatgatgatgaaaatactgttttacaaaaaaaggcattatct
aaaatgccaaaatgggcaaagaaatcaaaaccagtagttgatggagaagaagaagatgaa
gaggatttggaagattataatcatgatgcagttgaagaaaaggtattccaaaatgttacc
aaacttatcactgataaggcaaatatcgattattcagtgttggcagtcaaaacatttaaa
gttttccatgagagtaaaaaggtgattgctatcgacaataataatgaattcaatattacc
tgtgtagcatcacaaaccaatctgcatatttatagacaaggtactttaaagagagccatt
tgttcattcacctatccacaaggattcaaagcaaactttgtatcttttattccaaatacc
aataacattctcatcgttggaacttatggtcattattatttatttaatccagaaactaaa
gatttaaaacaaattaatttgagaattggtaaaaatacattaaaatcagttgcagtatca
tttaattattatgcaattgaagattcacttggaaagatttctttaatttcaaatacatcc
aataccgtagtcaataatattcaattgtcaaagggtaatgtatctgccattaaattctca
cccgatggaaacaccctctacgttgccagtgaaggtagtgtttcatgttttaatatcaag
actatgcgtatctctcatcgtttcaaggatcttggtaatgttagcactcaatcaattact
tctatttgttgttcaccaaatggaaattatttagctactggatctgaaagtggaattgtt
aatatttatgatataaaatcaagtatgacaagtgaaacaccaacaccattgaaatcaatt
tcttcgattatctatccaatcacagatttggcatatgatccaacctctaaatatctatgt
gcagtgtctgagctacaaaaggagattgtcagagtcatccaacacccatcactcaacgtt
gtgtcgatggtcaaggtaccaaaggttggccaactcactaaatgttcatttgatcatcaa
ggatatcttgtatttggtaatgcccgtggtacaatctatcaacatactgccaaattacat
cataaatcaatttaa
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