KEGG   Cavenderia fasciculata (cellular slime mold): DFA_08762
Entry
DFA_08762         CDS       T02668                                 
Symbol
rpb8
Name
(RefSeq) RNA polymerase II core subunit
  KO
K03016  DNA-directed RNA polymerases I, II, and III subunit RPABC3
Organism
dfa  Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03020  RNA polymerase
dfa03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:dfa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DFA_08762 (rpb8)
  09124 Replication and repair
   03420 Nucleotide excision repair
    DFA_08762 (rpb8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dfa03021]
    DFA_08762 (rpb8)
   03400 DNA repair and recombination proteins [BR:dfa03400]
    DFA_08762 (rpb8)
Transcription machinery [BR:dfa03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     DFA_08762 (rpb8)
  RNA polymerase III system
   RNA polymerase III
     DFA_08762 (rpb8)
  RNA polymerase I system
   RNA polymerase I
     DFA_08762 (rpb8)
DNA repair and recombination proteins [BR:dfa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      DFA_08762 (rpb8)
SSDB
Motif
Pfam: RNA_pol_Rpb8 RNA_pol_RpbG
Other DBs
NCBI-GeneID: 14869001
NCBI-ProteinID: XP_004356247
UniProt: F4Q461
LinkDB
Position
Unknown
AA seq 164 aa
MSNILFEDNFEVKDIDPDGKKFDRVSRYVCQSESYEMDLHLDLATHIYQLGHEKFKLVLA
SSLSLDGSLEQVAFDSNKPSLADKYDYVMYGKIFKYQKEVSSKVSIFASFGGLLMLLQGD
PRYLPGLELDSRLNQTTSTTIDRLYKYTKNTTQQTNKYQEYKQK
NT seq 495 nt   +upstreamnt  +downstreamnt
atgtcaaatatattattcgaagataactttgaagtaaaggatattgatcctgatggaaag
aaattcgatagagtatcaagatatgtttgtcaaagtgaaagttatgaaatggaccttcat
ttagatctcgcaactcatatatatcaattgggacatgaaaagtttaaacttgttctagca
tcatcactcagtcttgatggttcattggagcaagtagcattcgatagcaacaaaccatct
ttggccgataaatacgattatgtcatgtatggaaagatctttaaatatcaaaaggaggtt
tcttcaaaagtttctatttttgcatcatttggtggattattaatgttacttcaaggtgat
ccaagatatttacctggtttggaattggattctcgtttaaatcaaactacttctacgacg
atagatagactctataaatatacaaagaacacgacacaacaaacgaataaatatcaagaa
tacaaacaaaaatag

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