Cavenderia fasciculata (cellular slime mold): DFA_09123
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Entry
DFA_09123 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
DFA_09123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_09123
Enzymes [BR:
dfa01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
DFA_09123
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
DFA_09123
Prokaryotic type
DFA_09123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
14868573
NCBI-ProteinID:
XP_004354976
UniProt:
F4Q6R6
LinkDB
All DBs
Position
Unknown
AA seq
380 aa
AA seq
DB search
MSQPKITDFFAAVKKVDDTKEREDNDNVVAENEKRGKKRAQDEEEDILDQDTEEEEQIVD
NNNNNNKEEEKEEEKEEEKDDDEEEELKKTVKKQKKSETTTPSPKKAAAKKTVSLKISKQ
PTKKTTTTTSNQSDEQPKSTSITSSKSYDDMLDYLTDESWKTKIEAEFKKSYFKSMVSKL
NAVAADPKSKPIYPPKEEVFTALNWTPLDKVRVVIVGQDPYHGPDQAHGLSFSVKKGIAP
PPSLKNMYKELETDIPGFKTPKHGFLEHWARQGVLMLNAVLTVEEKTPNSHKDFGWAQFT
DQVLHLLNKSETPIVFILWGQFAQKKASMIDKNKHHIIASGHPSPLSVKTFLGSKPYSKT
NTYLQKIGSDPIDWNLPLNI
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgtcacaaccaaagataacagacttttttgcagcagtaaagaaagtagatgatactaag
gagagagaggataatgataatgttgtagccgaaaatgaaaagagagggaaaaagagagct
caagatgaagaagaagatattctcgatcaagatactgaagaagaggaacaaattgtagat
aataataataataataataaagaggaagaaaaagaagaagagaaagaggaggaaaaagat
gatgatgaagaagaagaactaaagaaaactgtaaagaaacaaaagaaatcagaaactaca
acaccttcaccaaagaaagcagcagctaaaaagactgtatctcttaaaatatcaaagcaa
ccaacaaaaaaaacaactactactacttcaaatcaatcagatgaacaaccaaaaagtact
agtattacttcatcaaaatcatatgatgatatgcttgattatttaacagatgaaagttgg
aagacaaagattgaagcagagtttaaaaagtcatattttaaatcgatggtatcaaagttg
aatgcagttgccgccgatccaaaatccaaaccaatctatccacccaaagaagaggtattt
accgctttgaattggacaccactcgacaaggtgagagtagttatcgttggacaagaccca
tatcacggtcctgatcaagcacatggtctatcgttttcagtaaagaaggggatcgctcca
ccaccatcactcaagaatatgtacaaagaattggaaactgatattccaggattcaaaaca
cccaaacatggctttttggaacattgggctcgtcaaggtgtactcatgctcaacgcagta
ctcactgtcgaagaaaagacaccaaactctcacaaggatttcggatgggctcaattcacc
gatcaagtccttcatctactaaacaagagtgagacgccgattgtattcatcctatgggga
cagtttgcacagaaaaaagcatcaatgattgacaagaacaagcatcatatcattgctagt
ggacatccatctcctctctctgtcaaaacttttcttggttccaaaccatattcaaagacc
aatacctatttacagaaaattggttccgatccaattgattggaatttacctttaaatatt
taa
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