Cavenderia fasciculata (cellular slime mold): DFA_09245
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Entry
DFA_09245 CDS
T02668
Name
(RefSeq) CAF1 family protein
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DFA_09245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_09245
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DFA_09245
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
DFA_09245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
COX6B
Sporozoite_P67
Anoctamin_N
Miga
New_glue
Motif
Other DBs
NCBI-GeneID:
14868361
NCBI-ProteinID:
XP_004354599
UniProt:
F4Q733
LinkDB
All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MKGLEPVTIDTDEIREVWAHNLEEEMALIRELVDDYNYIAMDTEFPGIVTRPVGSFRTPS
DYHYQTLRLNVDLLKIIQLGLTFSDSDGNLASNTCTWQFNFKFNLNEDMYAQDSIDLLSR
SGIEFKKNEENGIDVLDFGDLLMSSGIVLNEKIKWISFHSGYDFGYLIKVLTCTALPQEE
PEFFDLVRTYFPCIYDIKYLMKSCKNLKGGLSELAEDLDIKRIGPQHQAGSDSLLTCTTF
FKLRKMYFENQIDDSKYQGILYGLTSSFSQDNSQQNNNNSNSSSSSGTTSTSTSSTTSTS
TSSSTSSPSSSSLPNNNSYTASASSLNGHMSEQVTAPYNPRFPNMNQTKHCWASYVDFNG
CVKHYEGDESKCMEFKQSMNSLCPGKWLSDFEEQREAGIFPTNRF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggactggaaccagttactatagatacagatgaaattagagaagtatgggcacat
aatctagaagaagaaatggccttgataagagaattggttgacgattacaattatatagcg
atggatacagaatttccaggtatagttactagacctgttggatcatttagaacaccatca
gattatcattaccaaacacttagattaaatgtagatctcttaaaaataattcaacttggt
cttaccttttccgattcagatggtaaccttgcctcaaatacctgcacatggcaattcaac
tttaagtttaatctaaatgaggatatgtacgcacaggattcaatcgatttgctatcaaga
agcggtatcgaatttaaaaagaatgaagaaaatggcatcgatgtattggattttggtgat
ttgttaatgtcttctggaatcgtattaaacgaaaagattaaatggatttcttttcatagc
ggatatgattttggatatcttataaaggtactaacttgtacagctttacctcaagaagaa
ccagaattctttgatttggttaggacctatttcccatgtatttatgatatcaaatatttg
atgaagagttgtaaaaatttgaaaggtggattaagtgaattggcagaggatttagatatt
aaaagaattggaccacaacatcaagcaggcagtgatagtttgctaacatgtacgacattc
tttaaattgagaaagatgtactttgaaaatcaaatcgatgattccaagtaccaaggaatt
ctatatggtctcacttcatcattttcacaagataatagccaacaaaataacaataatagt
aatagcagcagcagcagcggcaccacaagtaccagcaccagctcgaccaccagcacatcc
acctcttcatccacttcatcaccatcctcatcatcactcccaaataacaatagctatact
gcatctgcatcatctttaaatgggcatatgtctgaacaagtcactgccccatacaaccca
cgtttcccaaacatgaaccaaaccaagcactgttgggctagttatgtagatttcaacggt
tgcgttaagcattatgaaggcgacgaatcaaagtgcatggaattcaagcaatctatgaac
tctctttgcccaggcaaatggttgtctgactttgaagaacaaagagaagctggtattttc
ccaaccaacagattttaa
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