Cavenderia fasciculata (cellular slime mold): DFA_09249
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Entry
DFA_09249 CDS
T02668
Symbol
fip1l1
Name
(RefSeq) cleavage and polyadenylation specificity factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DFA_09249 (fip1l1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_09249 (fip1l1)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
DFA_09249 (fip1l1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
DUF8138
Motif
Other DBs
NCBI-GeneID:
14868365
NCBI-ProteinID:
XP_004354603
UniProt:
F4Q737
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All DBs
Position
Unknown
AA seq
405 aa
AA seq
DB search
MEDQEGGTNNANDDNNNNNNSNVEEEDTNRRERDEDQQINNNNNSDDGGGGGGEDDGDDN
DDDDDDDDDDDDDDDEDVNIVLDTESVEAGRTSTKNSSGSIKPSFYKSAPVTNLAGVKYQ
ISKQATASQHQPNRPQKSIYDLDLGGFEDRPWTKPGADMSDYFNYNFTEETWKLYCERQI
QLRAEQANLGKIKSYESTNKMINGGNDQKIDLPPEFMPQEMNKQQQQGGRGGGGMPTDKR
GAVPQQGGRGMPGGWQANMQPPGGGPPGNFYPGGSGGYPPPYGGGVEGPVPTMPPSDERR
RERERDREGTSSGSGTRERERERDSGSGSGSRSDRDRERERDGSGSGSSRSDRSERDGSS
RSDRSERSSGSDRDRDRERSRRGDDSEYKRKSSEDPNDDRLKRRR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggaagatcaagaaggtggaacaaataatgccaacgatgacaacaacaataataataat
agcaatgtagaggaagaagataccaatagaagagaaagagatgaagatcaacaaattaat
aataataataatagtgatgatggaggtggaggaggtggtgaagatgatggagatgataat
gatgacgacgatgatgatgatgacgacgacgatgacgatgatgatgaagatgtaaatatt
gtattggataccgagagtgtggaggcaggaagaacatcgacaaagaactcttcaggttcc
atcaaaccttccttttataagagtgcacccgttacaaacttggctggtgtaaagtatcaa
atctcaaagcaagctactgcatctcagcatcaaccaaacagaccacagaaatctatatac
gatcttgatcttggaggttttgaagatcgaccatggactaaaccaggtgccgatatgagt
gattactttaattacaactttactgaagagacttggaaactgtactgtgagagacagatc
caactcagagctgaacaagctaatcttggaaagatcaaatcatacgaaagcacaaacaag
atgatcaacggtggaaacgatcaaaagatagacctaccacctgaatttatgcctcaagaa
atgaataagcaacaacaacaaggtggaagaggaggaggtggtatgccaaccgataaacgt
ggagcagtacctcaacaaggtggacgtggtatgcctggtggatggcaagcaaatatgcaa
cctccaggaggaggacctcctggtaatttttatccgggtggtagtggtggataccctcca
ccttatggcggtggtgttgaaggtccagtacctactatgccaccatcagacgaaagaaga
agagaacgagaaagagatagagaaggaacatctagtggatcaggaactagagaacgcgaa
agagaaagagatagtggtagtggtagcggtagtcgtagtgacagagaccgtgaaagagaa
agagatggtagtggtagcggtagtagtcgtagcgatcgtagtgaaagagatggcagcagt
cgtagcgaccgtagtgaaagaagtagtggtagtgacagagacagagaccgagaacgttca
agaagaggtgatgacagtgaatataaaagaaaatcttccgaagatccaaatgacgataga
ttaaaaagaaggagataa
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