Cavenderia fasciculata (cellular slime mold): DFA_09309
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Entry
DFA_09309 CDS
T02668
Name
(RefSeq) SNF2-related domain-containing protein
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DFA_09309
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_09309
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_09309
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
DFA_09309
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
DFA_09309
Chromatin remodeling factors
BAF complex
DFA_09309
PBAF complex
DFA_09309
GBAF(ncBAF) complex
DFA_09309
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
SNF2-rel_dom
Bromodomain
HDA2-3
QLQ
HSA
SnAC
WHD_HrcA
Imm40
Motif
Other DBs
NCBI-GeneID:
14868351
NCBI-ProteinID:
XP_004354663
UniProt:
F4Q797
LinkDB
All DBs
Position
Unknown
AA seq
1282 aa
AA seq
DB search
MSPSLASFDDNSSSVSIEDLSIAQKKDNVLHNLINALKVLKSKGVSEYNEQYQSLLQLIQ
LYSSNKISIKGTDIAYSIGNGVVESETVTAASAAAAVAAAQPKVVSTISEVVEEDIDMND
TQTTSTTSTTTSTSGGDVDMMTNEDDEEQTTTNKLDEELRLKANQIPIFKAQLEAFKYLS
RNLPIPSNTLSKISNLLEYEPKEEFDDLKFYSKGSIKTDNLNQPNPDIPETYKGLYEAVQ
SIHEREERIASKIQYRIEELKDLPSTIQPELKTRSLIEMKQLKVCFKKNIFKEIVYVLNV
QKKVRNDILSELNEDIFINSVDNIDIFVKPIPRETFKSGEMMYEGSTSQQNVESIFTVNR
KKFLSAVLNHHKEFSEFHSKKEKQTKNALKLIHRFHLEKERREQERLRKERIRLLKLQDT
EGYRDLLAKTKNDRLEMLMSQTDSLLSKIDFLVQKEKVEQEERAEKEREEREEKEKLDLI
ANANTPPSSNNQVDGSSTEEKKDGVATEGGDKTQWFNAPFTGGSSAKQPKSHISVNEEES
LIIINRLHQVLRYFLLRRLKKDVESQLPEKKERVIKCNLSAMQIVMYRSIAEYGQLPIDP
TSEMFKKSKTGMRGFNNTLKQMQKICNHPYLFLSEWDINEDLIRASGKFDMMDQILLKMK
ASGHRVLIFTQMTEVINLMGEYFSLKEWDYLRLDGSTKPEERSRLVVEWNRKDSPFFIFV
LSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRVGQVNRVNVFRLISANSIEEK
ILERATDKLEIDAKIIQAGMFNTHSNDQERRAKLEEFLHGFPANTAEEATTDLEEINRLI
ARDDEELIQFQAIDKEAARIETLKNKGVKKQHKSRLIIESELPEWLMRSPVAEDKEPLGA
RKRTTLNNLPMDDLTEIQWERMMELGMSLPEFKEYLANKKKKRVDLKKGSSAKKSTPKRK
RKDSESDSEEEDDGYYSDSLLMSDSEDITVTPTNDQEMDQDGEEKEKEKTSTTSTATTPA
HTPGKRGRPPKRASSAAITSPPEKKKPAAVTKRQRNAGAADTTTTEDEEETNGVASDVSV
SNDDQPMSPTQSSRRKRLSFTPKTLASPVAAASDDATPENGTPYKPRRASTRGSASVKKE
SQQQQPNGDAHDATNNNNTTESSSSAEKPNDEIFQGIIEKIKRIKEKTRKVSELFWDLPS
RSDYPDYFKVIKNPISMNEISQGSYKTPELFVSDWKLMFNNALTYNDPDSQVYRDAITLY
DILATEVKSHFESVIIPPLSKV
NT seq
3849 nt
NT seq
+upstream
nt +downstream
nt
atgtctcctagtttagcatcttttgatgataattcgtcatccgtatcgattgaagattta
tctattgctcaaaagaaagataatgtacttcacaatttgattaatgcattaaaagtatta
aaatcaaaaggagtcagtgaatataatgaacagtatcaatcgttacttcaactcattcaa
ctatactctagtaataagatttcaatcaagggaaccgatatagcatatagtattggcaat
ggtgtcgttgagagtgagactgtcactgctgcctctgctgcagcagctgttgctgcagct
caacccaaggttgtatctactatatccgaggtcgtagaagaagacattgatatgaacgac
actcaaacgacatcgaccacttctactaccacttcgaccagtggaggagacgttgacatg
atgacaaatgaagatgatgaagaacagacaacaacaaacaaactcgacgaagagttgaga
ctaaaagcaaatcaaatacccattttcaaagcacaattagaggcctttaaatatctctcc
agaaaccttcccattccaagtaatacattgtccaagatttcaaatctactcgaatacgaa
ccaaaggaagagtttgatgatttaaagttttattctaaaggttcaattaaaacagataat
ttaaaccaaccaaatccagatataccagaaacatataaaggattatatgaagctgttcaa
tcaatccatgaaagagaggaaagaatagcatcaaagatccaataccgcattgaagaatta
aaagatttaccatcaaccattcaaccagaattaaaaacaagatcattaatcgaaatgaaa
caattaaaagtatgttttaaaaagaatattttcaaagagattgtatatgtattaaatgtt
caaaaaaaagttagaaatgatattctaagtgaattaaatgaagatatatttataaattca
gttgataatattgatatatttgttaaaccaattccaagagaaacatttaaatctggagaa
atgatgtatgaaggatcaacttcacaacaaaatgtggaatcaatatttacagtgaataga
aagaaattcttgtctgctgtattgaatcatcacaaagagttttcagagtttcatagcaaa
aaggagaaacaaaccaagaatgcattgaaactcattcacagattccatcttgaaaaggag
agaagagagcaagagagattgcgcaaggagcgtattcgtttgctcaagttgcaagatacc
gagggttacagagaccttttggccaagaccaaaaacgatcgtctcgagatgctcatgtct
cagactgattcgttgctctccaagattgactttttggtgcaaaaggaaaaggtcgaacaa
gaggaacgcgccgaaaaagaacgtgaagaacgtgaggaaaaggaaaagttggatttgatt
gccaacgccaatactcctccttcatcaaacaaccaagtggacggatcgtcaacagaagag
aaaaaggatggtgttgctacagaaggtggagacaagacgcaatggttcaacgcaccattc
acaggtggcagcagtgccaaacaacccaagtcgcatattagtgtcaatgaagaagagtca
ctcatcattatcaatcgtctgcatcaagtgttgcgttactttttgttgcgtcgtctcaaa
aaggatgtcgagtcgcagttgcccgagaaaaaggagcgtgtcatcaagtgcaacttgtcg
gccatgcagattgtcatgtaccgttcgatcgccgagtatggccagctgcccatcgacccc
acctccgagatgtttaaaaagagcaagactggtatgcgtggcttcaacaacacactcaag
cagatgcaaaagatttgtaaccatccatacctctttttgagcgaatgggatatcaacgaa
gacttgattcgtgcatcgggcaagtttgacatgatggaccagatcctgctcaagatgaag
gcgtctggccatcgtgtactcatctttacacaaatgacagaagttatcaatttgatgggc
gagtacttttcgctcaaagagtgggattatttgcgtttggacggtagcaccaagcccgag
gaacgtagcagattggtggtcgagtggaaccgcaaggattcaccgttctttatctttgta
ttgtccacccatgccggtggtttgggtatgaacttgcagacagccgacacggtcattatc
tttgactctgactggaacccgcagatggatcttcaagcacaggatcgttgccatcgtgtg
ggacaggtgaaccgtgtcaatgtgttccgtctcatctcggccaactcgatcgaagaaaag
attttggagcgtgccacagacaagctcgagattgacgccaagatcatccaggccggtatg
tttaacacccattcaaacgaccaggagcgtcgtgccaagctcgaggagttcctccacggg
ttccccgccaacacggccgaggaagctacgaccgaccttgaagagatcaaccgtctgatt
gcccgtgacgacgaggagctgatccagttccaggccatcgacaaggaagctgctcgtatc
gagacactcaagaacaagggtgtcaagaagcagcacaagtcgcgtctcatcatcgagagc
gagttgcccgagtggttgatgcgcagtcccgtcgccgaggacaaggagccactcggcgca
cgtaagcgtaccacgctcaacaacctgcccatggacgacctcaccgagatacaatgggag
cgtatgatggagcttggcatgagtctgccagagtttaaagagtacttggccaacaagaaa
aagaagcgtgtcgaccttaaaaagggatcatctgctaaaaagagtacacccaagagaaag
agaaaggatagcgagagcgactctgaagaagaggatgacggatattactctgactcgttg
ttgatgagtgattctgaagacatcactgttactcctaccaacgatcaagaaatggatcaa
gatggtgaagaaaaagaaaaggaaaagacaagtactacaagcactgcaacaacaccagca
catacacctggaaaacgtggaagaccacccaaacgtgcgtcgtcagctgcgattacttca
ccaccagaaaagaagaaaccagcagcagttaccaagagacaacgcaatgccggtgctgcc
gacactaccaccactgaggatgaagaagagacaaatggagtagcaagtgacgtttctgtt
tccaatgacgaccaaccaatgtcgccaacacaatcttcgagaagaaagagattaagtttt
acccccaagacacttgcttcaccagtcgccgccgcctcagacgacgctacaccagagaat
ggtactccctacaaaccaagacgtgcaagtactcgaggaagtgcaagcgtcaaaaaagag
tcacaacaacaacaaccaaatggtgatgctcatgatgctaccaacaacaacaacacgacc
gaatcatcatcatcagcagaaaaaccaaatgatgaaatcttccaaggtatcattgaaaag
attaaacgtatcaaggaaaagactagaaaggtgtcagaattgttctgggatttgccatct
cgttccgactatcccgattatttcaaggtcatcaagaatcccatttcaatgaatgaaatc
agtcaaggttcatacaagacaccagaattgtttgtcagtgattggaaattgatgtttaac
aatgctctcacctacaatgatccagattctcaagtttacagagacgccatcaccctctac
gatatattggcaaccgaagttaaatctcattttgaatctgttattatccctccactatca
aaagtttaa
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