Cavenderia fasciculata (cellular slime mold): DFA_09393
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Entry
DFA_09393 CDS
T02668
Name
(RefSeq) RNA-binding region RNP-1 domain-containing protein
KO
K13218
polypyrimidine tract-binding protein 1
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_09393
03041 Spliceosome [BR:
dfa03041
]
DFA_09393
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
DFA_09393
Spliceosome [BR:
dfa03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
DFA_09393
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_5
RRM_1
RRM_8
Hamartin
Motif
Other DBs
NCBI-GeneID:
14868308
NCBI-ProteinID:
XP_004354746
UniProt:
F4Q7I0
LinkDB
All DBs
Position
Unknown
AA seq
656 aa
AA seq
DB search
MIKALNIYKEGRKEKQAGDHLLNYIYPIYQINQTAQQSFPLQLSFILPYIYHLFISTSHH
IIYINDMSTPTTTTDNNIKTPKMVKTETESDEEDVNTSVEEEDDQDQEQEQVVLEEVKTE
LLSSDQPQQQQQKISSPSPFSTSPITTTSTTSTTTTTTSTSTAATDFNEVLRKDPLLAST
MTPGSSTKTSPSTAPVQQAQRIPPPHEDDNIGDLDHNNELNLKRSLETNEDFEQSKAKKL
KNTTPQPSKVIHLRNLPIDCTEHEIMAIAAPFGQVDHILILKGKSQGFIQFLELTSASSF
IQFYTTIQGCIRAKNFFVQYSNREEITSTSAVETPNNILLVTISNIVYPVTIEVLYQLFG
KYGSVLKILIFSKSGNFQSLVQLHSLESAIQAKRELDGQSIYSGCCTMKIQYSSLSNLRI
KYNNDKSRDFTNPTLMSGIPSTIGFGNNSAGQLMSQQHAAAAAAIVNQGAISNPHLVNPA
TNMGVGPSSAAAAAVAQSLGMTGLQPQAMATLFPHISTPVLIVGGLPLSASPQDLFNLFG
VYGDPIRIKIMFNKKDTALIQMNLPQQAELALQYLNNVPFRGSILRVNLSRHASISMPKS
GDAQSDFTKDYTGSASHRFKQPGSKNYQNIHPPSMFLLSSSSSSIFIYYHRRFVEL
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaagctttgaatatatataaagaaggaaggaaggagaagcaagcaggtgaccac
ttacttaattatatctatcctatctatcaaatcaatcaaacagcgcagcaatcttttccg
ttgcaattaagctttattctcccctatatctatcatttatttatttcaacatcacaccac
atcatatatatcaacgacatgtctactcctacaactactactgacaacaacataaagaca
ccaaaaatggttaaaacagagacagagtctgatgaagaagatgtcaataccagcgttgag
gaggaagatgaccaagaccaagaacaagaacaagtagttttagaagaagttaaaaccgag
ttgttatcatctgatcaacctcaacaacaacaacaaaagatttcctctccttctcctttt
tctacatcaccaataacaacaacatcaactacttctactactacaacaacaacatctact
tctactgccgcaacagattttaatgaagtattaagaaaagatccattattagcatcaaca
atgacaccaggtagtagtactaaaacatcaccttcaacagcacctgtacaacaagcacaa
cgtattccaccaccacacgaagatgacaatataggcgacctcgaccacaacaatgaatta
aatctcaagagaagcttggaaaccaatgaggatttcgagcagagcaaagcaaagaaactc
aaaaacacgactccacaaccatccaaggtcatccatttgagaaatcttccaatcgattgt
actgaacacgagattatggccattgctgccccttttggacaggtggaccacattttgatt
ctcaaaggaaagagtcaaggttttattcaattcttggaactcacctctgcctcttccttt
attcaattctacacaaccattcaaggttgtataagagctaaaaatttctttgttcaatat
tcaaatcgtgaagaaatcacttcaacttctgctgttgaaacaccaaataatattttactt
gttactatttcaaatatagtttatccagttacgattgaagtattatatcaattgtttggt
aaatatggaagtgtattaaagattttaatcttttcaaaaagtggtaatttccaaagcctt
gttcaattacattctttagaatctgctattcaagctaaaagagaattagatggacaaagt
atttatagtggatgttgtacaatgaaaattcaatattcatcacttagtaacttacgtatt
aaatacaataatgataagagtcgtgattttactaatccgacgttaatgtcgggtattcct
agtacaattggatttggcaataattctgctgggcaattaatgtctcagcaacatgcagca
gctgctgcggcgattgtcaatcaaggtgcaattagtaacccacatcttgtgaatccggca
accaatatgggcgttggcccatcatcggcagcggctgctgcggttgcacaaagtcttggt
atgacaggtctccaaccacaggcaatggccaccctcttcccacacatatccactccggtt
ctaatcgtcggcggtcttcctctttcggcttctccacaagacctctttaatcttttcggt
gtttacggtgacccaatacgtattaaaatcatgtttaacaaaaaggatacagctttaatt
caaatgaatttaccacaacaagcagaattagcattacaatatttaaataatgtaccattt
agaggaagtatattaagagttaatctttcaaggcatgcatctatttccatgccaaagtct
ggtgatgctcaaagtgatttcaccaaagattatactggctctgcttctcatagatttaaa
cagccagggtcaaagaattaccaaaacatccatccaccatctatgtttttgctatcatca
tcgtcttcatctatctttatctactatcatcgtcgttttgtggagctataa
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