Cavenderia fasciculata (cellular slime mold): DFA_09709
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Entry
DFA_09709 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dfa03009
]
DFA_09709
Ribosome biogenesis [BR:
dfa03009
]
Eukaryotic type
90S particles
Other 90S particles
DFA_09709
Pre-60S particles
Other pre-60S particles
DFA_09709
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
DUF7570
EF-G-binding_N
Motif
Other DBs
NCBI-GeneID:
14867934
NCBI-ProteinID:
XP_004352362
UniProt:
F4Q8D7
LinkDB
All DBs
Position
Unknown
AA seq
1396 aa
AA seq
DB search
MVYNYTVEEIFPNILSASSQKSNESIRRLAVVLNAVTDVVKTKNAPIQPASYFALIISTL
QDGNYQPSQKQDLLKLLSIVIERVSQQLIRNISDTLITMSMKYMTEEFGNEEIMKPCVVV
LGRALTHSDTQSWQTSEHIKAYALLLKCSVDQRSKIRQKALKEVILVLNSSGVCGPRGGL
IKIVAQVSTNFCRDIFSNITLETMGEAYHALNVSHELVPLLQPSFVSQLMDSIIRLTSLG
NSSITPLCYKTIGTLFFRTNQLIGTHIQQLIEVLFQFSPSGIDIRSTIAYTELITQAYLH
FSRLDKQLCNQHLQNYFTTLMSNFSSDKQDITKVTMDGFKNVIVECINEEMISQATVSLK
NQQFNSPLEKIIETLMEGLKYTYKHSWELILQVISSMFQQLGSQAHPLLDKLLLGVDSLG
GLQHTVQQVIASALVAIGARNLLTLLPLNLDAHPDDKTRPNRGFLLQLMKKHLKFSELAA
FTDYFLPMSKVLKTKSNECLEDNRLIEAKNLDILYIQVWQLLPGFLTYPVDGDTAFKSIA
KTLGTTLQDNEVIRPIVCTGLTTMINTLKAARDADQDPIYLPLHRRHVTMSPTRAAAILK
TVAGFAKNFLPIMFNIYPSTKNDIRQYLQACIEAYVSIADATTVNNLFNNIVTKLLEAQK
EEEETRRLKPEEKIKTKRYYLTELTMGFIKRFAEQQDVIDEVTPSNGSLEQLNTLFKVIK
PQFQAQDPGIQKRTFKVLDRIMAHHPAFTMENLDKLKTILTFNLQQSSPNLKKLRIRCIK
QAVQAILEYGDTSQSEQQLQQDFENAFTQGNQQGEEGAEETMETRSTISFGGRSMRSTRS
GFSSFGSRGGSSAMAVSWTKLRQKLIPSLVPEIILCTKEVNKKCKEMSNDLVIEMGKVMC
LVAQRCIQLKKGIPREQQIQQAQSEALVEYIHLMAAGLASITPMMVSATIVAISRVVHSF
RDLLPLETVSQMLSTLFVLMDSPHREVVKSVMGFTRVVMACFRENSVIEPHLQMLMDGLS
KSSESDRNYFRIMIQILLQRLMKRFDYDQLHAMSQEGFKKVLVHIQRRKMRAEKLKEKQQ
SHVDDAMADDDDTRSVKSSKTAKTSKTSKTGAGRDDDSDGEIVDNELSEDESDDDIEEFL
FNVKKAAKRDTGDNWIVGEGDEPIDYLDRSAMNNIASNESGKVRIRKPNSVAEKTPISKY
FDTDGEGRMIIEDEDQPMDPRQKMRELKKKRSMSALIDEVFEEGADAYEKKAGYRAMKQK
SINKRANNENDDSDDSGNEDQMDEDLKSAFTKRTFATKFTTKTGKTAKTAKTTKTSLTNI
TRITSATDRYNRTRGISTNVNFNNPQHSQKKGEQKKGANAVQPYAYIPLDTNTLNKRTKH
LSAFKTVVNNNKKRKS
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggtatacaactatacagtagaggagatattccccaatatactcagtgcatcgagtcaa
aagagcaatgagagtattcgtcgattggcagtcgtcttgaatgcagtgaccgatgtcgtc
aagacaaagaacgcacccattcaacctgcatcctactttgcattgatcatatcgacactc
caagacggcaactatcaaccatcacaaaaacaagatctacttaaactcttatcaatcgtc
attgaaagagtatcacaacaattaattagaaatattagtgatacattgattacaatgtca
atgaaatatatgacagaggaatttggaaatgaagagattatgaaaccatgtgttgtagta
ttgggtagagcattgacacactctgatacacagtcgtggcaaaccagcgagcatatcaaa
gcctatgcattattattaaagtgttcggtcgatcaacgtagcaagattcgtcaaaaggct
ttgaaagaggttatcttggttttgaactcttcgggtgtctgtggaccacgtggaggattg
atcaagatcgttgcacaggtatcaaccaacttttgtcgtgacattttctcaaacatcacc
ctcgagacaatgggtgaggcctaccatgccctcaacgtgtctcacgaactcgttccactt
ctccaaccatcttttgtctcccaattgatggattctatcattagattgaccagtttgggt
aacagctcaatcactcccctctgctacaagactattggcacccttttcttccgtaccaat
caacttattggaactcacattcaacaactcatcgaagtattattccaattctcaccatct
ggtattgatatcagatcaactattgcttacactgaattaattactcaagcttatcttcat
ttttcaagattggataaacaattatgtaatcaacatttacaaaattattttacaacttta
atgtcaaattttagttctgataaacaagatattacaaaggttacaatggatggtttcaag
aatgtaattgtagaatgtataaatgaagagatgatttcacaagcaacagtatcattaaag
aatcaacaatttaattcaccattggaaaagattattgaaactttgatggaaggtttaaag
tatacatacaaacattcatgggaattgatcttgcaagtcatttcgtcaatgttccaacaa
cttggatcacaagctcatccattgctcgacaagttgttgttgggcgttgattcactcggc
ggtctccaacacactgtgcaacaagtgattgctagtgccttggtcgcaatcggtgctcgt
aacctactcaccctcttgccactcaatctcgacgctcaccccgacgacaagacacgtccc
aaccgtggcttcctcttgcagttgatgaagaaacacttaaagttttcagagttggctgct
tttaccgactactttttgcccatgtccaaggtgctcaagaccaagtccaacgaatgtctc
gaggacaatagattgattgaagccaagaacctcgacattctctatattcaagtgtggcag
ttactccccggtttccttacatacccagtcgacggtgacactgccttcaagtcgattgcc
aagacacttggtaccaccctgcaagacaatgaggtcattcgtcccatcgtctgtactggt
ctcactaccatgatcaacacactcaaggctgctcgtgatgctgaccaagaccccatctac
ctgccattgcaccgtcgtcatgtgaccatgtcacccacacgtgccgctgccatcctcaag
acggtcgcagggtttgccaaaaactttttgcccatcatgtttaacatttatccatcgacc
aagaacgatatccgtcaatacttgcaagcatgtattgaagcatacgtgtccattgccgat
gcaaccaccgtcaacaatctatttaataatatcgtcaccaaactactcgaagctcaaaaa
gaggaagaggagacacgtcgtctcaagcccgaggaaaagatcaagaccaagcgttactat
ctcaccgagttgactatgggtttcatcaagagatttgccgaacaacaagatgtcattgac
gaggtgacaccatccaacggtagtttggagcaattgaatactttgttcaaggtcatcaaa
ccacaattccaagcacaagatccaggtatccaaaaacgtacctttaaggtattggatcgt
atcatggctcatcatccagcattcaccatggagaatttagataaactcaagaccatcctt
acatttaaccttcaacaatcttcaccaaatctcaaaaaacttcgtattcgttgtataaag
caagctgtacaagccatcctagagtatggtgacacttctcaatctgaacaacaattacaa
caagattttgaaaatgctttcacccaaggaaatcaacaaggagaggaaggagcagaagag
acaatggaaacacgttcaactattagttttggaggtagatcaatgagatcaacacgttca
ggtttctcatcatttggaagtagaggaggatcatctgcaatggctgtcagttggaccaaa
ttacgtcaaaagttgattccatcattggtgccagagattatactatgtacaaaggaagtc
aacaaaaagtgtaaggaaatgtccaacgacttggtcattgaaatgggcaaggtcatgtgt
ttggtagctcaacgttgcattcaactcaagaagggtatcccacgtgaacaacaaatccaa
caagctcaatcagaggcattggtcgagtacatccacttgatggccgccggtttggcctcc
atcacccccatgatggtgtctgcaaccatcgtcgccatctcgcgtgtcgtccactcgttc
cgtgacctcttaccattagagacagtctctcaaatgttgtctacactctttgtactcatg
gacagtccacatcgtgaggttgtcaagtccgtgatgggctttacccgtgtcgtcatggcc
tgcttccgtgaaaactctgtcattgagccacacttgcaaatgttgatggatggtttgtcc
aagtcgtccgagagcgaccgtaactacttccgtatcatgatccagatcttgttgcagcgt
ctcatgaagcgtttcgactatgaccaattgcacgccatgtcgcaagagggtttcaaaaag
gtgttggtacacatccagcgtagaaagatgcgtgctgagaagctcaaggagaagcaacag
tcacacgtcgacgacgccatggccgacgacgacgacacacgttccgtcaagagtagcaag
actgccaagacaagcaagactagcaagactggtgccggcagagacgacgacagcgacggc
gagattgtcgacaatgagttgtctgaagacgagtcggacgacgacattgaagagttcttg
ttcaacgtcaagaaggccgccaagagagacactggcgacaactggatcgtcggtgaaggt
gatgaaccaatcgattacttggacagaagcgctatgaacaacattgcctcgaacgagtcg
ggcaaggtccgtatccgcaaaccaaattcagtggctgaaaagacacccatcagcaagtac
tttgacactgacggcgagggtcgtatgatcatcgaagacgaagaccaaccaatggatcca
cgtcaaaagatgagagaactcaaaaagaagagatccatgtcggcacttatcgacgaggtc
tttgaagagggagccgatgcctatgaaaagaaggccggttaccgtgccatgaaacaaaag
tcgatcaacaagcgtgccaacaatgaaaatgacgatagtgacgactctggcaacgaagat
caaatggacgaagacctcaagtcggcctttaccaagagaacctttgccaccaagtttacc
acaaagacgggcaagaccgccaagactgccaagaccaccaagacttcactcacaaacatt
accagaatcaccagtgccaccgatcgttacaacagaactcgtggtatcagtaccaacgtc
aactttaacaatccacaacactctcaaaagaagggtgaacaaaagaagggcgccaacgcc
gtacaaccatacgcctacattcctctcgataccaatactctaaataagagaactaaacat
ctttctgctttcaaaactgtcgttaataataataagaaaagaaagtcctaa
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