Cavenderia fasciculata (cellular slime mold): DFA_09939
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Entry
DFA_09939 CDS
T02668
Symbol
rfc3
Name
(RefSeq) replication factor C subunit
KO
K10756
replication factor C subunit 3/5
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03030
DNA replication
dfa03410
Base excision repair
dfa03420
Nucleotide excision repair
dfa03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
DFA_09939 (rfc3)
03410 Base excision repair
DFA_09939 (rfc3)
03420 Nucleotide excision repair
DFA_09939 (rfc3)
03430 Mismatch repair
DFA_09939 (rfc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dfa03032
]
DFA_09939 (rfc3)
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_09939 (rfc3)
03400 DNA repair and recombination proteins [BR:
dfa03400
]
DFA_09939 (rfc3)
DNA replication proteins [BR:
dfa03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
DFA_09939 (rfc3)
DNA Replication Termination Factors
ELG1-RFC complex
DFA_09939 (rfc3)
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
DFA_09939 (rfc3)
DNA repair and recombination proteins [BR:
dfa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
DFA_09939 (rfc3)
Check point factors
HRAD17(Rad24)-RFC complex
DFA_09939 (rfc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
Rep_fac_C
Sigma54_activ_2
AAA_lid_RFC1
AAA_5
AAA_22
AAA_16
Motif
Other DBs
NCBI-GeneID:
14867337
NCBI-ProteinID:
XP_004351835
UniProt:
F4Q8U6
LinkDB
All DBs
Position
Unknown
AA seq
352 aa
AA seq
DB search
MLWVDKYKPTSLDHMDYHPDLSLHLKNMIKSSDFPHLLVYGPSGAGKKTRIMAILKEVYG
PNCLKLKIDHRTFKHPSTNKNLQVTTISSPYHIEINAGEAGSNDRLIVQSIIKEIAQSPP
IDSSVFGAFKIVILNEVDKLSKDAQHALRRTMEKYAASCRLILCCDSTSRVIDPIRSRCL
GIRVPAPSIADVQNVLNIVATKEKFELPKKISEEIAVKAKGNLRYALLMLEAKKAKQYPF
VEGVPLLDWENYIQVIARDIIMEQTPAKLMAVRAKLYELIGHCIPPELIIKTLTLELLDS
IDNSLKCETIHWAAFYEHRIQIGTKPIFHLEAFIAKFMSCYKKFNSEPFVAQ
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgttatgggtagataaatataaaccaacttcacttgatcatatggattatcatcctgat
ttatcacttcatttaaagaatatgattaaatcatcagatttccctcatttattagtatat
ggaccatcgggagcaggtaaaaagacaaggattatggcaattcttaaagaggtgtatgga
cccaattgtctaaagttaaagattgatcatcgtacatttaaacatccatctaccaacaag
aatcttcaggtgactacgatcagttcaccctatcatatagaaatcaatgctggtgaggct
ggcagcaacgacagattgattgtacagagtatcatcaaagagattgctcaatcacctcct
atcgactcgtcagtgtttggtgctttcaagattgttattctcaacgaagtcgataaactt
tcaaaggatgctcaacatgctcttcgtcgtacaatggaaaaatatgctgcctcttgtaga
cttatcctttgttgtgatagtacaagtagagtaattgatccaattcgtagtagatgtctt
ggtattagagttcctgctccttcaattgctgatgtacaaaatgttttaaatatagtagca
acaaaagagaaatttgaattgccaaagaaaatatcagaggaaatagcagtaaaggcaaaa
ggtaatctaagatatgcattgttaatgttggaagcaaaaaaggcaaaacaatatcccttt
gttgaaggagttccattgttggattgggaaaattatattcaagtcattgcaagagacatc
attatggaacaaactcctgccaagttgatggcagtcagagctaaactttacgaactcatt
ggtcattgtattccacccgaactcatcattaaaactctaactcttgaactattggatagt
attgataattcccttaaatgtgaaactattcattgggctgctttttatgaacatcgtata
caaattggaacaaaaccaatatttcatttagaagcattcattgctaaatttatgagttgt
tataagaaatttaattctgaaccatttgtagctcaataa
DBGET
integrated database retrieval system
