Cavenderia fasciculata (cellular slime mold): DFA_09942
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Entry
DFA_09942 CDS
T02668
Name
(RefSeq) CHE group protein
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03082
ATP-dependent chromatin remodeling
dfa03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
DFA_09942
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
DFA_09942
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dfa01009
]
DFA_09942
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dfa03021
]
DFA_09942
03036 Chromosome and associated proteins [BR:
dfa03036
]
DFA_09942
Protein phosphatases and associated proteins [BR:
dfa01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
DFA_09942
Transcription machinery [BR:
dfa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
DFA_09942
SWI/SNF complex
DFA_09942
Chromosome and associated proteins [BR:
dfa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
DFA_09942
PBAF complex
DFA_09942
SWI/SNF complex
DFA_09942
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF5
DUF5083
Motif
Other DBs
NCBI-GeneID:
14867340
NCBI-ProteinID:
XP_004351838
UniProt:
F4Q8U9
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MQIEGDEDHNMGEEEDEDVNIDHHNDDNNHTTHNNNNNNETTTTHQIDNNNNNNNNNTDN
TDIAIGTSTTSTSTTSTTIRNSNYNEEDEDAEEDQIIKEDDEEEEEQQVEAAVAATEEEE
EEEEEEEDEEMEEDEEDEEEEDGEEEEEEEEEEESQAADEDEDGDSSDSDKESKAEKEKQ
LQAQQEQEQQQQEQPVKEPYRMPEDYLVPIRLEVQNGLYRLWDQVLWNINETQVTPEQFA
KGLCADLDLPDWFDPLVASAINNQLNRHRDVMERLEQVMAGIGSERIITIVLDLTVNGLH
LRDQFEWDILSSTNVEAFAKSLSLDLGLSREFENSISFTMREQIQYQYELLATRALQQRP
MVTAHTIMRNELDVQNWSPFVRPLYPIPHLIKRQ
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagaaggagatgaagatcataatatgggtgaagaggaagacgaagatgttaat
atagatcatcataatgatgataacaatcatactactcataataataacaataacaatgaa
acaactacaacacaccaaatagataataataataataataataataacaatactgataat
actgatatagcaattggtacaagtacaactagtacttctactacatcaacgacaattaga
aattcaaattataatgaagaagatgaagatgcagaggaggatcaaataattaaagaagat
gacgaggaagaagaggaacaacaagttgaagctgctgttgctgctactgaggaagaagaa
gaagaagaggaggaagaagaagacgaagaaatggaagaagatgaagaagatgaagaggaa
gaagatggtgaagaagaggaggaagaagaagaggaagaggaaagtcaagcagcagatgaa
gatgaagatggagattcatcagacagtgacaaggaaagtaaagcagaaaaggaaaaacaa
ttacaagcacaacaagaacaagaacaacaacaacaagaacaaccagtcaaagaaccatat
cgtatgccagaggactatttagtccccattcgattagaggttcaaaatggtctctatcga
ctatgggatcaggtgctatggaacatcaatgaaacacaagtcacacctgaacaatttgca
aagggattgtgtgcagatttggatctacccgattggtttgatccactagtagcatctgcc
ataaataatcaattaaatcgtcatcgagatgtaatggaaagactcgaacaagttatggct
ggtattggttcagaaagaattattaccattgttttggatttaacagtaaatggattacat
cttagagatcaatttgaatgggatatattatcatcaaccaatgtggaagcatttgccaaa
tcactgtcattggatttgggattatcaagagagtttgaaaattctattagttttacaatg
agagaacagatacaataccaatatgaattgttggctactcgagcacttcaacaaagacca
atggtcactgcacacaccatcatgagaaatgaacttgatgtccaaaattggagtcctttt
gttcgaccattatatcctattcctcatttaataaaaagacaataa
DBGET
integrated database retrieval system
