Cavenderia fasciculata (cellular slime mold): DFA_10202
Help
Entry
DFA_10202 CDS
T02668
Symbol
cstf2
Name
(RefSeq) RNA-binding region RNP-1 domain-containing protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
DFA_10202 (cstf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_10202 (cstf2)
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
DFA_10202 (cstf2)
U7-dependent histone pre-mRNA processing factors
DFA_10202 (cstf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
RRM_10
RRM_7
YflT
BRAP2
Motif
Other DBs
NCBI-GeneID:
14867108
NCBI-ProteinID:
XP_004354110
UniProt:
F4Q9J9
LinkDB
All DBs
Position
Unknown
AA seq
436 aa
AA seq
DB search
MNNNNAKPNPSRSVFVGNIPYAASESDLVNLFSEVGRVVSFRLVEDRDKKKPRGYGFCEY
MDQETALNAIRLLNNREFNKRQLRVSYADNDKANELASAMGIGLVSPGMEGSGGGGGGID
PRTGGGGVIPMQPGGGMGNFDQPPQQQPQQQKDGFQQLLENSNSPQLFEAMSKMKQLVQQ
SPDNARQVLLSNPQLALALLHAQVVLGMVNQQTAQNLINMNPKNQGPQGPQGQGPQGQGP
MFNQQQQQQQMGGGPNRGGPPQMGGPNIPNQMGGGPNQMGPNQMGGGPQMGMAGVGGPNQ
MGGGPNQMGGPMGNRGGPPNIPNQMGGGPNQMGGPNQMGGGPMGNNGPMGNNGPMGNNGP
MGNNGPIMGNQMNPMQGMQGGNPMNPMQGMQGGNPMNPMQGMQGNPMNQMGNQMNPMQGM
PGNQMNQMQKSQHNNK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataatgcgaaacctaatccatcaagaagtgtttttgttggtaatatacca
tacgcagcatcagagagtgatttagttaatttgttttcagaggttggtagagtggtatcg
tttagattggtcgaagacagagacaagaagaaaccaagaggctatgggttctgcgaatac
atggatcaagagactgcactcaatgcaatcagactactaaataatcgagaattcaacaaa
cgtcaacttagagtatcatatgcggacaatgacaaggcaaacgaattggcttctgcaatg
ggtatcggattggtgtctcctggtatggaaggtagtggtggtggtggtggtggaatagat
cctcgaacaggtggaggtggtgtcatcccaatgcaacctggtggtggtatgggtaatttc
gatcaacctcctcaacaacaacctcaacaacaaaaagatggattccaacaactactagaa
aatagcaactctccacaattgtttgaagcaatgtctaaaatgaaacaacttgttcaacaa
agtccagataatgcacgacaggttctactgagtaatcctcagttggcgttggctctttta
cacgcccaagtcgtattgggaatggtcaatcaacagaccgcacaaaacttgataaacatg
aatccaaagaaccaaggtcctcaaggtcctcaaggtcaaggtcctcagggacaaggacca
atgtttaatcaacaacaacaacaacaacagatgggtggtggaccaaatcgcggcggacct
ccacaaatgggtggaccaaacattccaaatcaaatgggtggtggtccaaatcaaatggga
ccaaatcaaatgggcggtggtccacagatgggaatggcgggtgttggaggaccaaatcaa
atgggaggcggtccgaatcagatgggcggtccaatgggcaacagagggggacccccaaac
attccaaatcaaatgggtggtggtccgaatcaaatgggcggaccaaatcaaatgggtggt
ggtcctatgggcaacaatggtccaatgggcaacaacggaccaatgggaaacaacggacca
atgggcaacaatggtccaataatgggcaaccaaatgaacccaatgcaaggaatgcaagga
ggcaacccgatgaatccaatgcaaggtatgcaaggaggcaatccaatgaaccctatgcaa
ggtatgcaaggtaacccaatgaatcaaatgggcaaccaaatgaatccaatgcaaggaatg
ccaggcaaccaaatgaaccaaatgcaaaaatcacaacacaacaacaaatga
DBGET
integrated database retrieval system
