Cavenderia fasciculata (cellular slime mold): DFA_10591
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Entry
DFA_10591 CDS
T02668
Name
(RefSeq) hypothetical protein
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
dfa
Cavenderia fasciculata (cellular slime mold)
Pathway
dfa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
dfa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DFA_10591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dfa03019
]
DFA_10591
Messenger RNA biogenesis [BR:
dfa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
DFA_10591
mRNA degradation factors
5'-3' decay
Decapping complex
DFA_10591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EDC4_C
Beta-prop_RIG_2nd
Ge1_WD40
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_like
ANAPC4_WD40
WD40_WDHD1_1st
YNCE
Hira
Motif
Other DBs
NCBI-GeneID:
14866971
NCBI-ProteinID:
XP_004354495
UniProt:
F4QAM9
LinkDB
All DBs
Position
Unknown
AA seq
1190 aa
AA seq
DB search
MNNGLHKLFQSVMNINNQNQQQQDGEQQQQETSTSTTTTTTTNEDENNVMRFFNKLTPPT
TNPTTTTTNTQQPSPPIEQQQQQQEMLTPSKKPLKSSIGGGVLPNLSFEQSNNITTSHNG
VYLNGNEITIDQSIAMKYISDLESQTITIIPSSLKYLWGRLISVNNNYICYAVKGEKIRV
LERSSSQKALIKDIVGTITDMQFFNDQSNLLACVTDSGALYVYDIESNPSTAGAISTQLC
LFSTTAVSADVNPQMLPKVCWCGPTRIAIGGSGVAALSIVDFSTSQQQPSILSIAVQAGA
NINALAYNPSNSILAYGGANGSVGLIDLNATSLKSSTTSLSTEEIHFVSFIGQGDHLIVA
SRGNRDISVVKIDGWKVVQKVTIQNGGDQPCLLNSVDQYLFVIHTGCSRGYVLHFDQQLE
QQQSTSETTPHFDYITEFDVKKPVLSYTVKSITSTPVARTSMREERKEKKFTIYSVQGHA
ILFHSIQLSQAYLESDIYNDRDGQTIGQKLTAATSVAVSSPPLPPATTEQDILELLTPGK
LLVNIPSSPPPVSLPDPTKDLKDLLSSTTTNVSSLKSHVEVNISPENGDEKSIPSPSSSS
NKKKKVPKSQLTKQHPSSELLPSPKSSVSPSISESDLTSVDQLLSPASLVNQTTSPTITK
KNNNGTSSPQPIKKEKELTSATTTTTTTSPPVSVKPKSKTPSIRPTPLQIPTVNPPSSSG
GSSLSLSNQSILPTTVQPIQPTIQSTNQQPSPTLQASPIITSTPPPPQQSTTTIVDPIVS
SSSSSKSTSTSSIDEQMITNLIQTTIKSNLEKMVKKEVVPVLYSLEKSLGVTFEQLVGKI
VQESVKKIGTKSESILKTSLDGLNSQLKTSTVTEAIESTIKQQIEAVFLEYFGQVLVPGF
EKSCMTMFKHISVVFERGLVESSQQFQLSLQAQQLASQVALTEQLKQQKESTDLILNGLL
QQQQQMQTDMKQLMNIIQFQQHQLQQQQHQTSAPSVFPTSTNNNNMSSPHQNMMNLYNSP
GQQQQQQPNASMFPQHLGFQQQQPQQPQQTFSPTIKPVSSLIYPELKIFIESGDYSSAFN
FALNASNLTMVVDLCSVLDPTEVYGRKNLQNPTIISLIQQLSFDLNNETDLKLKWIKESI
FQLDPNHTSIAEIVRKVLLPIKLKIESQPHILAKEYYTHPILSALKIILK
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgaataacggattacataaattatttcaatcagttatgaatatcaataaccaaaatcaa
caacaacaagatggtgaacaacagcaacaagagacatctacatctactacaacaactaca
actacaaatgaagatgagaataatgtaatgagattctttaacaagttgacaccaccaaca
actaatccaacaacaacaacaacaaatacacaacaaccatcaccacctattgaacaacaa
caacaacaacaagaaatgttaacaccatcaaagaaaccattaaaatcatcaattggagga
ggtgtattaccaaatttaagttttgaacaatcaaataatattacaacaagtcataatgga
gtttatttaaatggaaatgaaattacaattgatcaatcaatagcaatgaaatatatttca
gatttggagagtcaaacgataaccattattccatcgtcattaaaatatctttggggaaga
ttgatatcggtcaacaataattacatttgctatgctgtcaagggtgaaaagatacgtgta
cttgaaagatcgagttcacaaaaggcactgattaaagatatcgttggtacaatcactgac
atgcaattctttaacgaccagtccaatctattggcctgtgtcactgatagtggagcactc
tatgtctatgacattgaatcaaatccatcaactgccggtgccatctctactcaactgtgt
ctcttttctacgactgcagtctctgccgatgttaacccacaaatgttgcccaaggtatgt
tggtgtggtccaacacgaattgccattggaggaagtggagtggctgctctcagtatagtt
gacttttcaacatcacaacaacaaccatccatcctctcgatcgccgtacaagccggtgcc
aatatcaatgctcttgcatacaatccatccaactctattctcgcatacggtggtgcaaat
ggatcggttggattgatcgacctcaatgccacctcgctaaagagtagcacaacatcattg
tcaacagaagagattcactttgtatcgtttattggacaaggagatcatttgattgtagca
agtcgtggtaatcgtgacatatcagtggtcaagattgacggttggaaagttgtacaaaag
gttaccatccaaaatggaggtgaccaaccatgtctattaaattcagtagatcaataccta
tttgtcattcatactggttgttcaagaggttatgttttacattttgatcaacaattagaa
caacaacaatcgacctccgagacaactccacactttgattatattacagagtttgatgtt
aaaaagccagtacttagttacactgtaaaatcaatcacatcgactccagtcgcccgtact
tcaatgcgtgaagagagaaaggaaaagaaatttacaatctattctgttcaaggtcatgct
atcctctttcacagtatccaactatctcaagcctatttggaatctgatatttataatgat
agagatggtcaaactattggtcaaaaattaaccgctgccacctctgtcgctgtttcatct
ccaccattaccaccagcaacaaccgaacaagatatattggaattgctcacaccaggaaaa
ttacttgtaaatattccttcatctccaccaccagtatcacttccagatccaaccaaagat
ttgaaagatttattatcctctactacaacaaatgtttcatcgctaaagtctcatgttgaa
gttaatatttctccagaaaatggtgatgaaaaatcgataccatcaccatcctcctcgtcc
aacaaaaagaaaaaggtaccaaaatctcaattaaccaaacagcatccatcaagtgaattg
ttaccttcaccaaaatcatcagtctctccaagtatttcagaatcagacttgacatctgtt
gatcaattacttagtcctgctagtttggttaatcaaactacttctccaacaatcacaaaa
aaaaataataacggtacttcatcaccacaaccaattaaaaaggaaaaggaattgacatca
gcaactactacaactacaacaacatcaccaccagtttctgttaaaccaaaatcaaaaaca
ccatcgattagaccaacaccacttcaaattccaactgttaacccgccaagtagtagtggt
ggtagtagtcttagtctttctaatcaatcaattctaccaacaacagtacaaccgattcaa
ccaacaattcaatcaacaaatcaacaaccaagtccaactcttcaagcttctccaattatt
acaagtactcctcctccaccacaacaatcaactactactatagtagatccaattgtatca
tcatcatcatcatcaaagtcaacttcaacttcttcaattgatgaacaaatgattacaaat
ttaattcaaactacaattaaaagtaatcttgaaaagatggtaaaaaaggaagttgtacca
gtactatatagtcttgaaaagtcattgggtgtaacttttgaacaattggttggaaagatt
gtacaagaatctgttaaaaagattggaacaaagtctgaatctattctaaagactagtttg
gatggattgaattctcagctcaaaacatcaaccgtcactgaagccatcgaatctacgatc
aagcaacagattgaagctgtatttttagaatattttggacaagttttggtaccaggattt
gaaaagtcttgtatgaccatgtttaagcacatctcggttgtgtttgaacgtggacttgtc
gaaagtagtcagcaattccaactttcactacaagcccaacaacttgccagtcaagtagct
ctcactgaacaactcaaacaacaaaaggaatcaaccgatctcattttgaatggtctattg
caacaacaacaacaaatgcaaaccgatatgaaacaactgatgaatattattcaattccaa
caacatcaattacaacaacaacaacatcaaacaagtgcaccatcagtattcccaacttct
accaataataataatatgtcatcaccacatcaaaatatgatgaatctttataatagtcca
ggtcaacaacaacaacaacaaccaaatgcatcaatgtttcctcaacatttaggatttcaa
caacaacaacctcaacaacctcaacaaacattttcaccaaccatcaaaccagtatcatca
ttaatttatccagaattgaaaatatttattgaatctggagattattcgagtgcctttaac
tttgcattgaatgcatcaaacttgaccatggtagttgacctctgttcagtattggatcca
accgaggtgtatggacgcaagaaccttcaaaacccaaccatcatttcattgatccaacaa
ctatcatttgacctcaacaatgaaaccgacctcaaattgaaatggatcaaggagagtatc
tttcaattggacccaaatcatacctctatcgccgagattgttagaaaagtcttgctacca
attaaattaaaaatagaatctcaaccccatatcttggctaaagaatattatactcatcct
atactttcagctttaaaaataattttaaaataa
DBGET
integrated database retrieval system
